Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 AD001527.2-201ENST00000622994 785 ntBASIC17.44■□□□□ 0.38
CASC4Q6P4E1 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASC4Q6P4E1 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 TNRC18P3-201ENST00000441896 2691 ntBASIC17.43■□□□□ 0.38
CASC4Q6P4E1 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CASC4Q6P4E1 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CASC4Q6P4E1 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.42■□□□□ 0.38
CASC4Q6P4E1 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CASC4Q6P4E1 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CASC4Q6P4E1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CASC4Q6P4E1 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.42■□□□□ 0.38
CASC4Q6P4E1 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CASC4Q6P4E1 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
CASC4Q6P4E1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.42■□□□□ 0.38
CASC4Q6P4E1 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.42■□□□□ 0.38
CASC4Q6P4E1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CASC4Q6P4E1 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CASC4Q6P4E1 RCN1P2-201ENST00000398357 915 ntBASIC17.42■□□□□ 0.38
CASC4Q6P4E1 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.42■□□□□ 0.38
CASC4Q6P4E1 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CASC4Q6P4E1 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.42■□□□□ 0.38
CASC4Q6P4E1 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.42■□□□□ 0.38
CASC4Q6P4E1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.42■□□□□ 0.38
CASC4Q6P4E1 AP000867.3-201ENST00000524675 377 ntBASIC17.42■□□□□ 0.38
CASC4Q6P4E1 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.42■□□□□ 0.38
CASC4Q6P4E1 BNIP3P18-201ENST00000593976 575 ntBASIC17.42■□□□□ 0.38
CASC4Q6P4E1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CASC4Q6P4E1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.42■□□□□ 0.38
CASC4Q6P4E1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.42■□□□□ 0.38
CASC4Q6P4E1 INTS4P1-201ENST00000438455 1935 ntBASIC17.42■□□□□ 0.38
CASC4Q6P4E1 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
CASC4Q6P4E1 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CASC4Q6P4E1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CASC4Q6P4E1 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
CASC4Q6P4E1 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CASC4Q6P4E1 GPR89P-201ENST00000407924 1495 ntBASIC17.42■□□□□ 0.38
CASC4Q6P4E1 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CASC4Q6P4E1 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CASC4Q6P4E1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.42■□□□□ 0.38
CASC4Q6P4E1 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.42■□□□□ 0.38
CASC4Q6P4E1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms