Protein–RNA interactions for Protein: P53677

AP3M2, AP-3 complex subunit mu-2, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3M2P53677 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3M2P53677 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP3M2P53677 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3M2P53677 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3M2P53677 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.31■□□□□ 0.52
AP3M2P53677 AC104109.2-201ENST00000602919 1418 ntBASIC18.31■□□□□ 0.52
AP3M2P53677 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP3M2P53677 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3M2P53677 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.31■□□□□ 0.52
AP3M2P53677 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.31■□□□□ 0.52
AP3M2P53677 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
AP3M2P53677 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.3■□□□□ 0.52
AP3M2P53677 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
AP3M2P53677 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.3■□□□□ 0.52
AP3M2P53677 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
AP3M2P53677 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
AP3M2P53677 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3M2P53677 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
AP3M2P53677 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
AP3M2P53677 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3M2P53677 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3M2P53677 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
AP3M2P53677 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3M2P53677 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3M2P53677 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
AP3M2P53677 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
AP3M2P53677 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.3■□□□□ 0.52
AP3M2P53677 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.3■□□□□ 0.52
AP3M2P53677 FAM185BP-201ENST00000443595 716 ntBASIC18.3■□□□□ 0.52
AP3M2P53677 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
AP3M2P53677 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.3■□□□□ 0.52
AP3M2P53677 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.3■□□□□ 0.52
AP3M2P53677 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.3■□□□□ 0.52
AP3M2P53677 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
AP3M2P53677 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.3■□□□□ 0.52
AP3M2P53677 AC034105.1-201ENST00000563488 319 ntBASIC18.3■□□□□ 0.52
AP3M2P53677 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3M2P53677 AC013467.2-201ENST00000605472 835 ntBASIC18.3■□□□□ 0.52
AP3M2P53677 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
AP3M2P53677 AC120114.3-201ENST00000611923 658 ntBASIC18.3■□□□□ 0.52
AP3M2P53677 AL353732.1-201ENST00000569618 1459 ntBASIC18.3■□□□□ 0.52
AP3M2P53677 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
AP3M2P53677 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.3■□□□□ 0.52
AP3M2P53677 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.3■□□□□ 0.52
AP3M2P53677 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3M2P53677 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
AP3M2P53677 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3M2P53677 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP3M2P53677 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.29■□□□□ 0.52
AP3M2P53677 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP3M2P53677 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.29■□□□□ 0.52
AP3M2P53677 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.29■□□□□ 0.52
AP3M2P53677 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
AP3M2P53677 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
AP3M2P53677 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
AP3M2P53677 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.29■□□□□ 0.52
AP3M2P53677 AC106730.1-201ENST00000566722 1090 ntBASIC18.29■□□□□ 0.52
AP3M2P53677 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.29■□□□□ 0.52
AP3M2P53677 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
AP3M2P53677 LINC00895-201ENST00000629028 1637 ntBASIC18.29■□□□□ 0.52
AP3M2P53677 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP3M2P53677 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
AP3M2P53677 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP3M2P53677 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP3M2P53677 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
AP3M2P53677 AC105020.1-201ENST00000435356 2205 ntBASIC18.29■□□□□ 0.52
AP3M2P53677 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.29■□□□□ 0.52
AP3M2P53677 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP3M2P53677 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3M2P53677 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
AP3M2P53677 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3M2P53677 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.28■□□□□ 0.52
AP3M2P53677 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3M2P53677 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
AP3M2P53677 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3M2P53677 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.28■□□□□ 0.52
AP3M2P53677 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.28■□□□□ 0.52
AP3M2P53677 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3M2P53677 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.28■□□□□ 0.52
AP3M2P53677 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.28■□□□□ 0.52
AP3M2P53677 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.28■□□□□ 0.52
AP3M2P53677 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.28■□□□□ 0.52
AP3M2P53677 HCG4B-203ENST00000450128 991 ntBASIC18.28■□□□□ 0.52
AP3M2P53677 CXCL1P1-201ENST00000502804 216 ntBASIC18.28■□□□□ 0.52
AP3M2P53677 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.28■□□□□ 0.52
AP3M2P53677 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.28■□□□□ 0.52
AP3M2P53677 MPDU1-223ENST00000582151 728 ntBASIC18.28■□□□□ 0.52
AP3M2P53677 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3M2P53677 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.28■□□□□ 0.52
AP3M2P53677 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3M2P53677 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3M2P53677 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3M2P53677 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.28■□□□□ 0.52
AP3M2P53677 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3M2P53677 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP3M2P53677 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.28■□□□□ 0.52
AP3M2P53677 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3M2P53677 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP3M2P53677 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP3M2P53677 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms