Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.88■□□□□ 0.61
HTTP42858 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HTTP42858 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.88■□□□□ 0.61
HTTP42858 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.88■□□□□ 0.61
HTTP42858 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.88■□□□□ 0.61
HTTP42858 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.88■□□□□ 0.61
HTTP42858 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HTTP42858 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HTTP42858 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.88■□□□□ 0.61
HTTP42858 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC18.88■□□□□ 0.61
HTTP42858 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HTTP42858 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.88■□□□□ 0.61
HTTP42858 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
HTTP42858 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HTTP42858 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HTTP42858 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HTTP42858 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTTP42858 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTTP42858 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTTP42858 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HTTP42858 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTTP42858 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC18.87■□□□□ 0.61
HTTP42858 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC18.87■□□□□ 0.61
HTTP42858 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HTTP42858 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HTTP42858 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HTTP42858 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.87■□□□□ 0.61
HTTP42858 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
HTTP42858 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.87■□□□□ 0.61
HTTP42858 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTTP42858 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTTP42858 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTTP42858 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTTP42858 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTTP42858 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.87■□□□□ 0.61
HTTP42858 LYSMD4-203ENST00000378904 2122 ntBASIC18.87■□□□□ 0.61
HTTP42858 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTTP42858 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.87■□□□□ 0.61
HTTP42858 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTTP42858 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HTTP42858 DOC2GP-202ENST00000514950 1163 ntBASIC18.87■□□□□ 0.61
HTTP42858 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HTTP42858 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC18.87■□□□□ 0.61
HTTP42858 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTTP42858 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HTTP42858 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
HTTP42858 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.87■□□□□ 0.61
HTTP42858 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
HTTP42858 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HTTP42858 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HTTP42858 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.87■□□□□ 0.61
HTTP42858 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.87■□□□□ 0.61
HTTP42858 MYCLP2-201ENST00000449268 967 ntBASIC18.87■□□□□ 0.61
HTTP42858 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.87■□□□□ 0.61
HTTP42858 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.87■□□□□ 0.61
HTTP42858 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTTP42858 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.86■□□□□ 0.61
HTTP42858 CETN4P-206ENST00000642099 2168 ntBASIC18.86■□□□□ 0.61
HTTP42858 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HTTP42858 AC018665.1-201ENST00000622927 1362 ntBASIC18.86■□□□□ 0.61
HTTP42858 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTTP42858 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTTP42858 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC18.86■□□□□ 0.61
HTTP42858 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
HTTP42858 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC18.86■□□□□ 0.61
HTTP42858 TMEM261P1-201ENST00000604899 340 ntBASIC18.86■□□□□ 0.61
HTTP42858 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.86■□□□□ 0.61
HTTP42858 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTTP42858 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HTTP42858 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTTP42858 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HTTP42858 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HTTP42858 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.86■□□□□ 0.61
HTTP42858 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.86■□□□□ 0.61
HTTP42858 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTTP42858 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTTP42858 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTTP42858 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.86■□□□□ 0.61
HTTP42858 AC105021.1-202ENST00000570572 669 ntBASIC18.86■□□□□ 0.61
HTTP42858 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.86■□□□□ 0.61
HTTP42858 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.86■□□□□ 0.61
HTTP42858 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.86■□□□□ 0.61
HTTP42858 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.86■□□□□ 0.61
HTTP42858 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTTP42858 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HTTP42858 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.85■□□□□ 0.61
HTTP42858 NAT9-224ENST00000583757 583 ntTSL 3 BASIC18.85■□□□□ 0.61
HTTP42858 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.85■□□□□ 0.61
HTTP42858 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTTP42858 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTTP42858 AL035456.1-201ENST00000456064 1369 ntBASIC18.85■□□□□ 0.61
HTTP42858 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTTP42858 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTTP42858 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HTTP42858 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTTP42858 PDIA3P1-201ENST00000471856 1510 ntBASIC18.85■□□□□ 0.61
HTTP42858 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTTP42858 MTND6P24-201ENST00000440466 518 ntBASIC18.85■□□□□ 0.61
HTTP42858 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.85■□□□□ 0.61
HTTP42858 PPA1-206ENST00000625364 644 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms