Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 SSR4P1-203ENST00000599569 2260 ntBASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 AC092053.1-201ENST00000605787 1936 ntBASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01558Q9Y6Z2 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 AC023632.3-201ENST00000521633 145 ntBASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC8.81□□□□□ -1
LINC01558Q9Y6Z2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
LINC01558Q9Y6Z2 AC073869.1-201ENST00000415574 2762 ntBASIC8.8□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms