Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFX6Q8HWS3 FOSL1P1-201ENST00000511041 816 ntBASIC17.82■□□□□ 0.44
RFX6Q8HWS3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.82■□□□□ 0.44
RFX6Q8HWS3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.82■□□□□ 0.44
RFX6Q8HWS3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.82■□□□□ 0.44
RFX6Q8HWS3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.82■□□□□ 0.44
RFX6Q8HWS3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFX6Q8HWS3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RFX6Q8HWS3 FLJ38576-201ENST00000623820 2459 ntBASIC17.82■□□□□ 0.44
RFX6Q8HWS3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RFX6Q8HWS3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.82■□□□□ 0.44
RFX6Q8HWS3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.82■□□□□ 0.44
RFX6Q8HWS3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFX6Q8HWS3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.82■□□□□ 0.44
RFX6Q8HWS3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFX6Q8HWS3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFX6Q8HWS3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFX6Q8HWS3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RFX6Q8HWS3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.82■□□□□ 0.44
RFX6Q8HWS3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFX6Q8HWS3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RFX6Q8HWS3 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFX6Q8HWS3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RFX6Q8HWS3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RFX6Q8HWS3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX6Q8HWS3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
RFX6Q8HWS3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX6Q8HWS3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX6Q8HWS3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.81■□□□□ 0.44
RFX6Q8HWS3 KRT16P4-201ENST00000453883 522 ntBASIC17.81■□□□□ 0.44
RFX6Q8HWS3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RFX6Q8HWS3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.81■□□□□ 0.44
RFX6Q8HWS3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.81■□□□□ 0.44
RFX6Q8HWS3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RFX6Q8HWS3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.81■□□□□ 0.44
RFX6Q8HWS3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RFX6Q8HWS3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX6Q8HWS3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RFX6Q8HWS3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX6Q8HWS3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX6Q8HWS3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX6Q8HWS3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RFX6Q8HWS3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX6Q8HWS3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX6Q8HWS3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RFX6Q8HWS3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX6Q8HWS3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 AC124067.4-201ENST00000519691 2379 ntBASIC17.8■□□□□ 0.44
RFX6Q8HWS3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 AC132008.2-207ENST00000454517 770 ntBASIC17.8■□□□□ 0.44
RFX6Q8HWS3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 RNF216P1-203ENST00000404404 2427 ntBASIC17.8■□□□□ 0.44
RFX6Q8HWS3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 AC004817.3-201ENST00000602957 2129 ntBASIC17.8■□□□□ 0.44
RFX6Q8HWS3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 AC079776.2-201ENST00000641154 1609 ntBASIC17.8■□□□□ 0.44
RFX6Q8HWS3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RFX6Q8HWS3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 ACTG1P4-201ENST00000425123 1122 ntBASIC17.79■□□□□ 0.44
RFX6Q8HWS3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms