Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ATP13A1Q9HD20 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.54■□□□□ 0.4
ATP13A1Q9HD20 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP13A1Q9HD20 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP13A1Q9HD20 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP13A1Q9HD20 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP13A1Q9HD20 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP13A1Q9HD20 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
ATP13A1Q9HD20 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP13A1Q9HD20 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.54■□□□□ 0.4
ATP13A1Q9HD20 AC034105.1-201ENST00000563488 319 ntBASIC17.54■□□□□ 0.4
ATP13A1Q9HD20 TERC-201ENST00000602385 541 ntBASIC17.54■□□□□ 0.4
ATP13A1Q9HD20 GGTLC5P-201ENST00000617623 998 ntBASIC17.54■□□□□ 0.4
ATP13A1Q9HD20 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATP13A1Q9HD20 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATP13A1Q9HD20 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP13A1Q9HD20 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP13A1Q9HD20 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP13A1Q9HD20 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.54■□□□□ 0.4
ATP13A1Q9HD20 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
ATP13A1Q9HD20 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATP13A1Q9HD20 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.54■□□□□ 0.4
ATP13A1Q9HD20 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ATP13A1Q9HD20 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ATP13A1Q9HD20 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP13A1Q9HD20 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP13A1Q9HD20 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ATP13A1Q9HD20 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.54■□□□□ 0.4
ATP13A1Q9HD20 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 MIR4751-201ENST00000578027 74 ntBASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 AC004790.2-201ENST00000623588 572 ntBASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP13A1Q9HD20 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP13A1Q9HD20 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP13A1Q9HD20 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP13A1Q9HD20 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATP13A1Q9HD20 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATP13A1Q9HD20 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP13A1Q9HD20 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP13A1Q9HD20 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.52■□□□□ 0.4
ATP13A1Q9HD20 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
ATP13A1Q9HD20 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
ATP13A1Q9HD20 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.52■□□□□ 0.4
ATP13A1Q9HD20 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
ATP13A1Q9HD20 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
ATP13A1Q9HD20 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP13A1Q9HD20 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.52■□□□□ 0.4
ATP13A1Q9HD20 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATP13A1Q9HD20 AC080080.1-201ENST00000625121 2420 ntBASIC17.52■□□□□ 0.4
ATP13A1Q9HD20 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.52■□□□□ 0.39
ATP13A1Q9HD20 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ATP13A1Q9HD20 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATP13A1Q9HD20 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ATP13A1Q9HD20 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.52■□□□□ 0.39
ATP13A1Q9HD20 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP13A1Q9HD20 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP13A1Q9HD20 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP13A1Q9HD20 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP13A1Q9HD20 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
ATP13A1Q9HD20 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
ATP13A1Q9HD20 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
ATP13A1Q9HD20 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ATP13A1Q9HD20 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.51■□□□□ 0.39
ATP13A1Q9HD20 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
ATP13A1Q9HD20 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
ATP13A1Q9HD20 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms