Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.12■■□□□ 1.299e-6■■□□□ 13.2
XRN2Q9H0D6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.1■■□□□ 1.299e-6■■□□□ 13.2
XRN2Q9H0D6 PANK2-205ENST00000495692 967 ntTSL 323■■□□□ 1.279e-6■■□□□ 13.2
XRN2Q9H0D6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.97■■□□□ 1.279e-6■■□□□ 13.2
XRN2Q9H0D6 ABCD4-209ENST00000477803 594 ntTSL 222.87■■□□□ 1.259e-6■■□□□ 13.2
XRN2Q9H0D6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC22.87■■□□□ 1.259e-6■■□□□ 13.2
XRN2Q9H0D6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.242e-12■■□□□ 13.2
XRN2Q9H0D6 PLCD3-201ENST00000538093 546 ntTSL 422.43■■□□□ 1.189e-6■■□□□ 13.2
XRN2Q9H0D6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.182e-12■■□□□ 13.2
XRN2Q9H0D6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.179e-6■■□□□ 13.2
XRN2Q9H0D6 BSCL2-221ENST00000530009 539 ntTSL 422.2■■□□□ 1.149e-6■■□□□ 13.2
XRN2Q9H0D6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.19■■□□□ 1.149e-6■■□□□ 13.2
XRN2Q9H0D6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.149e-6■■□□□ 13.2
XRN2Q9H0D6 SSUH2-204ENST00000415132 1645 ntTSL 522.13■■□□□ 1.139e-6■■□□□ 13.2
XRN2Q9H0D6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.84■■□□□ 1.099e-6■■□□□ 13.2
XRN2Q9H0D6 PLXNB1-210ENST00000467913 688 ntTSL 221.61■■□□□ 1.059e-6■■□□□ 13.2
XRN2Q9H0D6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.5■■□□□ 1.039e-6■■□□□ 13.2
XRN2Q9H0D6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.49■■□□□ 1.039e-6■■□□□ 13.2
XRN2Q9H0D6 SGSH-217ENST00000576941 578 ntTSL 421.46■■□□□ 1.039e-6■■□□□ 13.2
XRN2Q9H0D6 SGSH-208ENST00000572208 584 ntTSL 421.46■■□□□ 1.039e-6■■□□□ 13.2
XRN2Q9H0D6 SGSH-212ENST00000575188 553 ntTSL 321.46■■□□□ 1.039e-6■■□□□ 13.2
XRN2Q9H0D6 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.44■■□□□ 1.029e-6■■□□□ 13.2
XRN2Q9H0D6 MAP2K3-213ENST00000583508 607 ntTSL 521.4■■□□□ 1.029e-6■■□□□ 13.2
XRN2Q9H0D6 MAP2K3-206ENST00000479129 574 ntTSL 321.4■■□□□ 1.029e-6■■□□□ 13.2
XRN2Q9H0D6 MAP2K3-207ENST00000483928 511 ntTSL 521.4■■□□□ 1.029e-6■■□□□ 13.2
XRN2Q9H0D6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC21.4■■□□□ 1.029e-6■■□□□ 13.2
XRN2Q9H0D6 MEF2D-205ENST00000475587 1627 ntTSL 521.34■■□□□ 1.019e-6■■□□□ 13.2
XRN2Q9H0D6 SLC22A18-207ENST00000463571 1030 ntTSL 521.3■■□□□ 19e-6■■□□□ 13.2
XRN2Q9H0D6 RAC1-204ENST00000488373 845 ntTSL 1 (best)21.21■□□□□ 0.999e-6■■□□□ 13.2
XRN2Q9H0D6 DDX56-207ENST00000448192 691 ntTSL 221.17■□□□□ 0.989e-6■■□□□ 13.2
XRN2Q9H0D6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.12■□□□□ 0.972e-12■■□□□ 13.2
XRN2Q9H0D6 PLCD3-206ENST00000544446 503 ntTSL 421.11■□□□□ 0.979e-6■■□□□ 13.2
XRN2Q9H0D6 RNF38-207ENST00000484621 667 ntTSL 421.08■□□□□ 0.979e-6■■□□□ 13.2
XRN2Q9H0D6 SSUH2-205ENST00000420394 1634 ntTSL 1 (best)21.03■□□□□ 0.969e-6■■□□□ 13.2
XRN2Q9H0D6 CPSF4-205ENST00000440514 578 ntTSL 321■□□□□ 0.959e-6■■□□□ 13.2
XRN2Q9H0D6 LBX2-205ENST00000550249 1236 ntTSL 1 (best)20.98■□□□□ 0.959e-6■■□□□ 13.2
XRN2Q9H0D6 VPS9D1-203ENST00000563798 459 ntTSL 320.79■□□□□ 0.929e-6■■□□□ 13.2
XRN2Q9H0D6 MAP2K3-211ENST00000529517 514 ntTSL 420.78■□□□□ 0.929e-6■■□□□ 13.2
XRN2Q9H0D6 MAP2K3-212ENST00000534743 541 ntTSL 420.78■□□□□ 0.929e-6■■□□□ 13.2
XRN2Q9H0D6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.69■□□□□ 0.99e-6■■□□□ 13.2
XRN2Q9H0D6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.65■□□□□ 0.99e-6■■□□□ 13.2
XRN2Q9H0D6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.899e-6■■□□□ 13.2
XRN2Q9H0D6 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.899e-6■■□□□ 13.2
XRN2Q9H0D6 MMD-202ENST00000571578 670 ntTSL 320.59■□□□□ 0.892e-12■■□□□ 13.2
XRN2Q9H0D6 CTSB-223ENST00000532370 693 ntTSL 220.44■□□□□ 0.869e-6■■□□□ 13.2
XRN2Q9H0D6 KHSRP-206ENST00000595258 672 ntTSL 520.15■□□□□ 0.829e-6■■□□□ 13.2
XRN2Q9H0D6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.82e-12■■□□□ 13.2
XRN2Q9H0D6 ACADVL-201ENST00000322910 2352 ntTSL 219.94■□□□□ 0.782e-12■■□□□ 13.2
XRN2Q9H0D6 PLCD3-208ENST00000590644 595 ntTSL 419.92■□□□□ 0.789e-6■■□□□ 13.2
XRN2Q9H0D6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.779e-6■■□□□ 13.2
XRN2Q9H0D6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.769e-6■■□□□ 13.2
XRN2Q9H0D6 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.749e-6■■□□□ 13.2
XRN2Q9H0D6 IL4I1-206ENST00000596022 747 ntTSL 219.7■□□□□ 0.749e-6■■□□□ 13.2
XRN2Q9H0D6 SLC22A18-208ENST00000467719 2635 ntTSL 1 (best)19.68■□□□□ 0.749e-6■■□□□ 13.2
XRN2Q9H0D6 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.749e-6■■□□□ 13.2
XRN2Q9H0D6 FAM76B-210ENST00000542135 610 ntTSL 219.54■□□□□ 0.729e-6■■□□□ 13.2
XRN2Q9H0D6 ACADVL-207ENST00000577433 803 ntTSL 219.52■□□□□ 0.722e-12■■□□□ 13.2
XRN2Q9H0D6 MIR943-201ENST00000401286 94 ntBASIC19.52■□□□□ 0.729e-6■■□□□ 13.2
XRN2Q9H0D6 TNPO2-208ENST00000587654 575 ntTSL 419.45■□□□□ 0.79e-6■■□□□ 13.2
XRN2Q9H0D6 ERGIC3-217ENST00000488935 389 ntTSL 219.38■□□□□ 0.699e-6■■□□□ 13.2
XRN2Q9H0D6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.28■□□□□ 0.682e-12■■□□□ 13.2
XRN2Q9H0D6 INSIG2-202ENST00000411929 574 ntTSL 219.26■□□□□ 0.679e-6■■□□□ 13.2
XRN2Q9H0D6 GADD45B-205ENST00000587887 276 ntTSL 1 (best)19.21■□□□□ 0.679e-6■■□□□ 13.2
XRN2Q9H0D6 NELFA-209ENST00000453740 738 ntTSL 319.17■□□□□ 0.669e-6■■□□□ 13.2
XRN2Q9H0D6 IL4I1-208ENST00000601717 2261 ntTSL 1 (best)18.98■□□□□ 0.639e-6■■□□□ 13.2
XRN2Q9H0D6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.629e-6■■□□□ 13.2
XRN2Q9H0D6 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.82■□□□□ 0.66e-6■■□□□ 13.2
XRN2Q9H0D6 KHSRP-209ENST00000597704 706 ntTSL 518.82■□□□□ 0.69e-6■■□□□ 13.2
XRN2Q9H0D6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.69e-6■■□□□ 13.2
XRN2Q9H0D6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.69e-6■■□□□ 13.2
XRN2Q9H0D6 SGSH-202ENST00000570427 583 ntTSL 318.78■□□□□ 0.69e-6■■□□□ 13.2
XRN2Q9H0D6 AEN-202ENST00000557787 1242 ntTSL 1 (best)18.73■□□□□ 0.599e-6■■□□□ 13.2
XRN2Q9H0D6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.589e-6■■□□□ 13.2
XRN2Q9H0D6 ATP5C1-210ENST00000493053 1096 ntTSL 518.67■□□□□ 0.589e-6■■□□□ 13.2
XRN2Q9H0D6 ERGIC3-216ENST00000488384 766 ntTSL 218.66■□□□□ 0.589e-6■■□□□ 13.2
XRN2Q9H0D6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.64■□□□□ 0.579e-6■■□□□ 13.2
XRN2Q9H0D6 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.61■□□□□ 0.579e-6■■□□□ 13.2
XRN2Q9H0D6 NELFA-215ENST00000488452 560 ntTSL 418.59■□□□□ 0.579e-6■■□□□ 13.2
XRN2Q9H0D6 OGG1-212ENST00000426518 874 ntTSL 518.53■□□□□ 0.569e-6■■□□□ 13.2
XRN2Q9H0D6 DMKN-262ENST00000593342 271 ntAPPRIS ALT2 TSL 318.45■□□□□ 0.549e-6■■□□□ 13.2
XRN2Q9H0D6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.43■□□□□ 0.549e-6■■□□□ 13.2
XRN2Q9H0D6 RPH3AL-217ENST00000575634 571 ntTSL 418.4■□□□□ 0.549e-6■■□□□ 13.2
XRN2Q9H0D6 ATP5C1-206ENST00000465936 292 ntTSL 318.33■□□□□ 0.529e-6■■□□□ 13.2
XRN2Q9H0D6 URM1-206ENST00000483206 731 ntTSL 218.32■□□□□ 0.529e-6■■□□□ 13.2
XRN2Q9H0D6 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.3■□□□□ 0.529e-6■■□□□ 13.2
XRN2Q9H0D6 PGPEP1-207ENST00000597663 363 ntTSL 318.3■□□□□ 0.529e-6■■□□□ 13.2
XRN2Q9H0D6 NUP62-204ENST00000594673 564 ntTSL 518.26■□□□□ 0.519e-6■■□□□ 13.2
XRN2Q9H0D6 BSCL2-214ENST00000464544 794 ntTSL 218.19■□□□□ 0.59e-6■■□□□ 13.2
XRN2Q9H0D6 BSCL2-217ENST00000524862 865 ntTSL 518.19■□□□□ 0.59e-6■■□□□ 13.2
XRN2Q9H0D6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.59e-6■■□□□ 13.2
XRN2Q9H0D6 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.489e-6■■□□□ 13.2
XRN2Q9H0D6 SGSH-207ENST00000571675 571 ntTSL 218.06■□□□□ 0.489e-6■■□□□ 13.2
XRN2Q9H0D6 NUP62-219ENST00000599830 588 ntTSL 418.03■□□□□ 0.489e-6■■□□□ 13.2
XRN2Q9H0D6 NELFA-213ENST00000467661 1707 ntTSL 1 (best)17.93■□□□□ 0.469e-6■■□□□ 13.2
XRN2Q9H0D6 AGAP3-210ENST00000473140 624 ntTSL 417.93■□□□□ 0.469e-6■■□□□ 13.2
XRN2Q9H0D6 TMEM63B-208ENST00000532634 828 ntTSL 317.82■□□□□ 0.449e-6■■□□□ 13.2
XRN2Q9H0D6 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.82■□□□□ 0.449e-6■■□□□ 13.2
XRN2Q9H0D6 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.79■□□□□ 0.442e-12■■□□□ 13.2
XRN2Q9H0D6 NUP62-206ENST00000595463 563 ntTSL 417.79■□□□□ 0.449e-6■■□□□ 13.2
XRN2Q9H0D6 DMKN-250ENST00000486756 811 ntTSL 417.79■□□□□ 0.449e-6■■□□□ 13.2
Retrieved 100 of 21,068 protein–RNA pairs in 183.7 ms