RNA–Protein interactions for RNA: ENST00000473140.1

AGAP3-210, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 4

Gene AGAP3, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-210ENST00000473140 NISCHQ9Y2I1 1504 aa36.42■■■■□ 3.42
AGAP3-210ENST00000473140 ABCC9O60706 1549 aa33.19■■■□□ 2.9
AGAP3-210ENST00000473140 CCDC180Q9P1Z9 1646 aa32.8■■■□□ 2.84
AGAP3-210ENST00000473140 DNAJC5BQ9UF47 199 aa31.48■■■□□ 2.63
AGAP3-210ENST00000473140 RB1CC1Q8TDY2 1594 aa31.47■■■□□ 2.63
AGAP3-210ENST00000473140 NACADO15069 1562 aa31.18■■■□□ 2.58
AGAP3-210ENST00000473140 DCAF8L2P0C7V8 631 aa31.04■■■□□ 2.56
AGAP3-210ENST00000473140 PABPN1Q86U42 306 aaKnown RBP eCLIP30.89■■■□□ 2.54
AGAP3-210ENST00000473140 MYO15BQ96JP2 1530 aa30.65■■■□□ 2.5
AGAP3-210ENST00000473140 UNC13AQ9UPW8 1703 aa30.59■■■□□ 2.49
AGAP3-210ENST00000473140 BICRAQ9NZM4 1560 aa30.47■■■□□ 2.47
AGAP3-210ENST00000473140 SHROOM4Q9ULL8 1493 aa30.16■■■□□ 2.42
AGAP3-210ENST00000473140 DCAF1Q9Y4B6 1507 aa30.1■■■□□ 2.41
AGAP3-210ENST00000473140 ZCCHC6Q5VYS8 1495 aaKnown RBP30.06■■■□□ 2.4
AGAP3-210ENST00000473140 CECR2Q9BXF3 1484 aa29.98■■■□□ 2.39
AGAP3-210ENST00000473140 CC2D2AQ9P2K1 1620 aa29.94■■■□□ 2.38
AGAP3-210ENST00000473140 SCRIBQ14160 1630 aa29.82■■■□□ 2.36
AGAP3-210ENST00000473140 EIF4G1Q04637 1599 aaKnown RBP29.79■■■□□ 2.36
AGAP3-210ENST00000473140 DNAJC5Q9H3Z4 198 aa29.3■■■□□ 2.28
AGAP3-210ENST00000473140 CUX2O14529 1486 aa28.83■■■□□ 2.21
AGAP3-210ENST00000473140 NCAPD3P42695 1498 aa28.81■■■□□ 2.2
AGAP3-210ENST00000473140 ERCC6Q03468 1493 aa28.75■■■□□ 2.19
AGAP3-210ENST00000473140 ATAD2BQ9ULI0 1458 aa28.62■■■□□ 2.17
AGAP3-210ENST00000473140 SMARCA2P51531 1590 aa28.55■■■□□ 2.16
AGAP3-210ENST00000473140 HMGXB3Q12766 1538 aa28.5■■■□□ 2.15
AGAP3-210ENST00000473140 SMARCA4P51532 1647 aa28.44■■■□□ 2.14
AGAP3-210ENST00000473140 NESP48681 1621 aa28.36■■■□□ 2.13
AGAP3-210ENST00000473140 BAZ1BQ9UIG0 1483 aaKnown RBP28.34■■■□□ 2.13
AGAP3-210ENST00000473140 BAZ1AQ9NRL2 1556 aaPredicted RBP28.32■■■□□ 2.12
AGAP3-210ENST00000473140 PEG3Q9GZU2 1588 aa28.2■■■□□ 2.1
AGAP3-210ENST00000473140 LAMC3Q9Y6N6 1575 aa28.19■■■□□ 2.1
AGAP3-210ENST00000473140 THOC2Q8NI27 1593 aaKnown RBP28.11■■■□□ 2.09
AGAP3-210ENST00000473140 PDS5BQ9NTI5 1447 aa28.11■■■□□ 2.09
AGAP3-210ENST00000473140 MROH2BQ7Z745 1585 aa28.02■■■□□ 2.08
AGAP3-210ENST00000473140 KIF21AQ7Z4S6 1674 aa27.94■■■□□ 2.06
AGAP3-210ENST00000473140 CADPSQ9ULU8 1353 aa27.93■■■□□ 2.06
AGAP3-210ENST00000473140 TRIM41Q8WV44 630 aa27.82■■■□□ 2.04
AGAP3-210ENST00000473140 MRC2Q9UBG0 1479 aa27.81■■■□□ 2.04
AGAP3-210ENST00000473140 WDR62O43379 1518 aa27.71■■■□□ 2.03
AGAP3-210ENST00000473140 CEP164Q9UPV0 1460 aa27.64■■■□□ 2.01
AGAP3-210ENST00000473140 WIZO95785 1651 aa27.63■■■□□ 2.01
AGAP3-210ENST00000473140 FANCD2Q9BXW9 1451 aa27.57■■■□□ 2
AGAP3-210ENST00000473140 OSCARQ8IYS5 282 aa27.55■■■□□ 2
AGAP3-210ENST00000473140 CFTRP13569 1480 aa27.49■■□□□ 1.99
AGAP3-210ENST00000473140 RSF1Q96T23 1441 aaPredicted RBP27.35■■□□□ 1.97
AGAP3-210ENST00000473140 TOP2AP11388 1531 aaKnown RBP27.31■■□□□ 1.96
AGAP3-210ENST00000473140 URB2Q14146 1524 aaKnown RBP27.31■■□□□ 1.96
AGAP3-210ENST00000473140 IFT140Q96RY7 1462 aa27.13■■□□□ 1.93
AGAP3-210ENST00000473140 PRDM2Q13029 1718 aa27.07■■□□□ 1.92
AGAP3-210ENST00000473140 RIMBP3CA6NJZ7 1639 aa27.04■■□□□ 1.92
AGAP3-210ENST00000473140 RIMBP3BA6NNM3 1639 aa27.04■■□□□ 1.92
AGAP3-210ENST00000473140 RIMBP3Q9UFD9 1639 aa27.04■■□□□ 1.92
AGAP3-210ENST00000473140 CCDC88BA6NC98 1476 aa27.03■■□□□ 1.92
AGAP3-210ENST00000473140 ABCC8Q09428 1581 aa27.02■■□□□ 1.92
AGAP3-210ENST00000473140 ZNF608Q9ULD9 1512 aaPredicted RBP27.02■■□□□ 1.92
AGAP3-210ENST00000473140 TOPBP1Q92547 1522 aa26.98■■□□□ 1.91
AGAP3-210ENST00000473140 ARHGEF11O15085 1522 aa26.95■■□□□ 1.9
AGAP3-210ENST00000473140 CYB5RLQ6IPT4 315 aa26.89■■□□□ 1.9
AGAP3-210ENST00000473140 DNMBPQ6XZF7 1577 aa26.84■■□□□ 1.89
AGAP3-210ENST00000473140 EIF4G3O43432 1585 aaKnown RBP26.83■■□□□ 1.89
AGAP3-210ENST00000473140 FBLN2P98095 1184 aa26.79■■□□□ 1.88
AGAP3-210ENST00000473140 AQRO60306 1485 aaKnown RBP eCLIP26.79■■□□□ 1.881e-7■■■■■ 28.3
AGAP3-210ENST00000473140 TRHP20396 242 aaPredicted RBP26.74■■□□□ 1.87
AGAP3-210ENST00000473140 TARBP1Q13395 1621 aaKnown RBP26.72■■□□□ 1.87
AGAP3-210ENST00000473140 CHD1O14646 1710 aa26.68■■□□□ 1.86
AGAP3-210ENST00000473140 POLA1P09884 1462 aaPredicted RBP26.68■■□□□ 1.86
AGAP3-210ENST00000473140 ARAP1Q96P48 1450 aa26.63■■□□□ 1.85
AGAP3-210ENST00000473140 SOGA1O94964 1423 aa26.63■■□□□ 1.85
AGAP3-210ENST00000473140 TDRD9Q8NDG6 1382 aaKnown RBP26.59■■□□□ 1.85
AGAP3-210ENST00000473140 RAD54L2Q9Y4B4 1467 aa26.57■■□□□ 1.84
AGAP3-210ENST00000473140 CHMP7Q8WUX9 453 aaPredicted RBP26.56■■□□□ 1.84
AGAP3-210ENST00000473140 WDR97A6NE52 1622 aa26.51■■□□□ 1.83
AGAP3-210ENST00000473140 SNAPC4Q5SXM2 1469 aa26.48■■□□□ 1.83
AGAP3-210ENST00000473140 FGD5Q6ZNL6 1462 aa26.45■■□□□ 1.82
AGAP3-210ENST00000473140 MAGI1Q96QZ7 1491 aaPredicted RBP26.45■■□□□ 1.82
AGAP3-210ENST00000473140 SYNJ1O43426 1573 aa26.43■■□□□ 1.82
AGAP3-210ENST00000473140 GRIN2BQ13224 1484 aa26.42■■□□□ 1.82
AGAP3-210ENST00000473140 CLASP1Q7Z460 1538 aa26.41■■□□□ 1.82
AGAP3-210ENST00000473140 SYNJ2O15056 1496 aa26.36■■□□□ 1.81
AGAP3-210ENST00000473140 CUX1P39880 1505 aa26.34■■□□□ 1.81
AGAP3-210ENST00000473140 AEBP2Q6ZN18 517 aaPredicted RBP26.29■■□□□ 1.8
AGAP3-210ENST00000473140 GAPVD1Q14C86 1478 aa26.26■■□□□ 1.79
AGAP3-210ENST00000473140 ABCA10Q8WWZ4 1543 aa26.16■■□□□ 1.78
AGAP3-210ENST00000473140 PBRM1Q86U86 1689 aa26.15■■□□□ 1.78
AGAP3-210ENST00000473140 ABCA5Q8WWZ7 1642 aa26.07■■□□□ 1.76
AGAP3-210ENST00000473140 WRNQ14191 1432 aaPredicted RBP eCLIP26.05■■□□□ 1.76
AGAP3-210ENST00000473140 GRIN2AQ12879 1464 aa26.04■■□□□ 1.76
AGAP3-210ENST00000473140 NUP160Q12769 1436 aa25.97■■□□□ 1.75
AGAP3-210ENST00000473140 SUPT5HO00267 1087 aaKnown RBP25.94■■□□□ 1.74
AGAP3-210ENST00000473140 FHAD1B1AJZ9 1412 aa25.94■■□□□ 1.74
AGAP3-210ENST00000473140 CEP170Q5SW79 1584 aa25.92■■□□□ 1.74
AGAP3-210ENST00000473140 ERCC6L2Q5T890 1561 aa25.92■■□□□ 1.74
AGAP3-210ENST00000473140 ADAMTS12P58397 1594 aa25.9■■□□□ 1.74
AGAP3-210ENST00000473140 TOP2BQ02880 1626 aa25.84■■□□□ 1.73
AGAP3-210ENST00000473140 SHROOM2Q13796 1616 aa25.84■■□□□ 1.73
AGAP3-210ENST00000473140 ERICH3Q5RHP9 1530 aa25.83■■□□□ 1.73
AGAP3-210ENST00000473140 JPH4Q96JJ6 628 aa25.82■■□□□ 1.72
AGAP3-210ENST00000473140 BIVM-ERCC5R4GMW8 1640 aa25.81■■□□□ 1.72
AGAP3-210ENST00000473140 PRG4Q92954 1404 aaPredicted RBP25.79■■□□□ 1.72
AGAP3-210ENST00000473140 NPM1P06748 294 aaKnown RBP eCLIP25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms