RNA–Protein interactions for RNA: ENST00000453740.5

NELFA-209, Transcript of negative elongation factor complex member A, humanhuman

TSL 3

Gene NELFA, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-209ENST00000453740 NISCHQ9Y2I1 1504 aa39.57■■■■□ 3.93
NELFA-209ENST00000453740 CCDC180Q9P1Z9 1646 aa35.47■■■■□ 3.27
NELFA-209ENST00000453740 ABCC9O60706 1549 aa35.13■■■■□ 3.21
NELFA-209ENST00000453740 RB1CC1Q8TDY2 1594 aa33.64■■■□□ 2.98
NELFA-209ENST00000453740 NACADO15069 1562 aa33.5■■■□□ 2.95
NELFA-209ENST00000453740 DCAF8L2P0C7V8 631 aa33.19■■■□□ 2.9
NELFA-209ENST00000453740 MYO15BQ96JP2 1530 aa33.18■■■□□ 2.9
NELFA-209ENST00000453740 ZCCHC6Q5VYS8 1495 aaKnown RBP32.86■■■□□ 2.85
NELFA-209ENST00000453740 DCAF1Q9Y4B6 1507 aa32.79■■■□□ 2.84
NELFA-209ENST00000453740 UNC13AQ9UPW8 1703 aa32.77■■■□□ 2.84
NELFA-209ENST00000453740 DNAJC5BQ9UF47 199 aa32.73■■■□□ 2.83
NELFA-209ENST00000453740 PABPN1Q86U42 306 aaKnown RBP eCLIP32.7■■■□□ 2.83
NELFA-209ENST00000453740 BICRAQ9NZM4 1560 aa32.59■■■□□ 2.81
NELFA-209ENST00000453740 SHROOM4Q9ULL8 1493 aa32.36■■■□□ 2.77
NELFA-209ENST00000453740 SCRIBQ14160 1630 aa32.2■■■□□ 2.75
NELFA-209ENST00000453740 EIF4G1Q04637 1599 aaKnown RBP31.8■■■□□ 2.68
NELFA-209ENST00000453740 CC2D2AQ9P2K1 1620 aa31.79■■■□□ 2.68
NELFA-209ENST00000453740 CECR2Q9BXF3 1484 aa31.68■■■□□ 2.66
NELFA-209ENST00000453740 NCAPD3P42695 1498 aa30.91■■■□□ 2.54
NELFA-209ENST00000453740 SMARCA4P51532 1647 aa30.81■■■□□ 2.52
NELFA-209ENST00000453740 ATAD2BQ9ULI0 1458 aa30.8■■■□□ 2.52
NELFA-209ENST00000453740 SMARCA2P51531 1590 aa30.78■■■□□ 2.52
NELFA-209ENST00000453740 BAZ1AQ9NRL2 1556 aaPredicted RBP30.73■■■□□ 2.51
NELFA-209ENST00000453740 HMGXB3Q12766 1538 aa30.71■■■□□ 2.51
NELFA-209ENST00000453740 PEG3Q9GZU2 1588 aa30.58■■■□□ 2.49
NELFA-209ENST00000453740 BAZ1BQ9UIG0 1483 aaKnown RBP30.51■■■□□ 2.48
NELFA-209ENST00000453740 MROH2BQ7Z745 1585 aa30.43■■■□□ 2.46
NELFA-209ENST00000453740 ERCC6Q03468 1493 aa30.38■■■□□ 2.45
NELFA-209ENST00000453740 CUX2O14529 1486 aa30.32■■■□□ 2.44
NELFA-209ENST00000453740 NESP48681 1621 aa30.22■■■□□ 2.43
NELFA-209ENST00000453740 LAMC3Q9Y6N6 1575 aa30.17■■■□□ 2.42
NELFA-209ENST00000453740 WIZO95785 1651 aa30.05■■■□□ 2.4
NELFA-209ENST00000453740 DNAJC5Q9H3Z4 198 aa30.01■■■□□ 2.39
NELFA-209ENST00000453740 PDS5BQ9NTI5 1447 aa30■■■□□ 2.39
NELFA-209ENST00000453740 CADPSQ9ULU8 1353 aa29.95■■■□□ 2.39
NELFA-209ENST00000453740 THOC2Q8NI27 1593 aaKnown RBP29.94■■■□□ 2.38
NELFA-209ENST00000453740 RSF1Q96T23 1441 aaPredicted RBP29.91■■■□□ 2.38
NELFA-209ENST00000453740 KIF21AQ7Z4S6 1674 aa29.86■■■□□ 2.37
NELFA-209ENST00000453740 TOP2AP11388 1531 aaKnown RBP29.78■■■□□ 2.36
NELFA-209ENST00000453740 MRC2Q9UBG0 1479 aa29.69■■■□□ 2.34
NELFA-209ENST00000453740 CFTRP13569 1480 aa29.67■■■□□ 2.34
NELFA-209ENST00000453740 WDR62O43379 1518 aa29.63■■■□□ 2.33
NELFA-209ENST00000453740 CEP164Q9UPV0 1460 aa29.61■■■□□ 2.33
NELFA-209ENST00000453740 FANCD2Q9BXW9 1451 aa29.58■■■□□ 2.33
NELFA-209ENST00000453740 CCDC88BA6NC98 1476 aa29.4■■■□□ 2.3
NELFA-209ENST00000453740 PRDM2Q13029 1718 aa29.36■■■□□ 2.29
NELFA-209ENST00000453740 URB2Q14146 1524 aaKnown RBP29.3■■■□□ 2.28
NELFA-209ENST00000453740 ABCC8Q09428 1581 aa29.1■■■□□ 2.25
NELFA-209ENST00000453740 TOPBP1Q92547 1522 aa29.04■■■□□ 2.24
NELFA-209ENST00000453740 IFT140Q96RY7 1462 aa29.04■■■□□ 2.24
NELFA-209ENST00000453740 DNMBPQ6XZF7 1577 aa28.98■■■□□ 2.23
NELFA-209ENST00000453740 OSCARQ8IYS5 282 aa28.93■■■□□ 2.22
NELFA-209ENST00000453740 SUPT5HO00267 1087 aaKnown RBP28.88■■■□□ 2.21
NELFA-209ENST00000453740 ZNF608Q9ULD9 1512 aaPredicted RBP28.88■■■□□ 2.21
NELFA-209ENST00000453740 TARBP1Q13395 1621 aaKnown RBP28.77■■■□□ 2.2
NELFA-209ENST00000453740 POLA1P09884 1462 aaPredicted RBP28.77■■■□□ 2.2
NELFA-209ENST00000453740 EIF4G3O43432 1585 aaKnown RBP28.76■■■□□ 2.19
NELFA-209ENST00000453740 TRIM41Q8WV44 630 aa28.68■■■□□ 2.18
NELFA-209ENST00000453740 AQRO60306 1485 aaKnown RBP eCLIP28.66■■■□□ 2.187e-8■■■□□ 17.1
NELFA-209ENST00000453740 SOGA1O94964 1423 aa28.64■■■□□ 2.18
NELFA-209ENST00000453740 WDR97A6NE52 1622 aa28.61■■■□□ 2.17
NELFA-209ENST00000453740 FGD5Q6ZNL6 1462 aa28.59■■■□□ 2.17
NELFA-209ENST00000453740 RAD54L2Q9Y4B4 1467 aa28.59■■■□□ 2.17
NELFA-209ENST00000453740 CUX1P39880 1505 aa28.59■■■□□ 2.17
NELFA-209ENST00000453740 TDRD9Q8NDG6 1382 aaKnown RBP28.5■■■□□ 2.15
NELFA-209ENST00000453740 RIMBP3CA6NJZ7 1639 aa28.47■■■□□ 2.15
NELFA-209ENST00000453740 RIMBP3BA6NNM3 1639 aa28.47■■■□□ 2.15
NELFA-209ENST00000453740 RIMBP3Q9UFD9 1639 aa28.47■■■□□ 2.15
NELFA-209ENST00000453740 CHD1O14646 1710 aa28.47■■■□□ 2.15
NELFA-209ENST00000453740 ARHGEF11O15085 1522 aa28.43■■■□□ 2.14
NELFA-209ENST00000453740 FBLN2P98095 1184 aa28.4■■■□□ 2.14
NELFA-209ENST00000453740 GRIN2BQ13224 1484 aa28.4■■■□□ 2.14
NELFA-209ENST00000453740 MAGI1Q96QZ7 1491 aaPredicted RBP28.4■■■□□ 2.14
NELFA-209ENST00000453740 SNAPC4Q5SXM2 1469 aa28.39■■■□□ 2.13
NELFA-209ENST00000453740 ABCA10Q8WWZ4 1543 aa28.33■■■□□ 2.13
NELFA-209ENST00000453740 GAPVD1Q14C86 1478 aa28.31■■■□□ 2.12
NELFA-209ENST00000453740 CHMP7Q8WUX9 453 aaPredicted RBP28.29■■■□□ 2.12
NELFA-209ENST00000453740 SYNJ2O15056 1496 aa28.28■■■□□ 2.12
NELFA-209ENST00000453740 WRNQ14191 1432 aaPredicted RBP eCLIP28.26■■■□□ 2.12
NELFA-209ENST00000453740 ABCA5Q8WWZ7 1642 aa28.25■■■□□ 2.11
NELFA-209ENST00000453740 SYNJ1O43426 1573 aa28.24■■■□□ 2.11
NELFA-209ENST00000453740 PBRM1Q86U86 1689 aa28.24■■■□□ 2.11
NELFA-209ENST00000453740 TOP2BQ02880 1626 aa28.24■■■□□ 2.11
NELFA-209ENST00000453740 BIVM-ERCC5R4GMW8 1640 aa28.24■■■□□ 2.11
NELFA-209ENST00000453740 CLASP1Q7Z460 1538 aa28.22■■■□□ 2.11
NELFA-209ENST00000453740 CYB5RLQ6IPT4 315 aa28.17■■■□□ 2.1
NELFA-209ENST00000453740 ARAP1Q96P48 1450 aa28.15■■■□□ 2.1
NELFA-209ENST00000453740 GRIN2AQ12879 1464 aa28.02■■■□□ 2.08
NELFA-209ENST00000453740 ADAMTS12P58397 1594 aa28.01■■■□□ 2.07
NELFA-209ENST00000453740 ERICH3Q5RHP9 1530 aa28.01■■■□□ 2.07
NELFA-209ENST00000453740 FHAD1B1AJZ9 1412 aa27.98■■■□□ 2.07
NELFA-209ENST00000453740 NUP160Q12769 1436 aa27.93■■■□□ 2.06
NELFA-209ENST00000453740 CEP170Q5SW79 1584 aa27.86■■■□□ 2.05
NELFA-209ENST00000453740 TRHP20396 242 aaPredicted RBP27.78■■■□□ 2.04
NELFA-209ENST00000453740 SHROOM2Q13796 1616 aa27.78■■■□□ 2.04
NELFA-209ENST00000453740 KIF27Q86VH2 1401 aa27.71■■■□□ 2.03
NELFA-209ENST00000453740 ERCC6L2Q5T890 1561 aa27.7■■■□□ 2.03
NELFA-209ENST00000453740 IGF1RP08069 1367 aa27.64■■■□□ 2.02
NELFA-209ENST00000453740 CUL7Q14999 1698 aa27.62■■■□□ 2.01
NELFA-209ENST00000453740 RUSC2Q8N2Y8 1516 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms