RNA–Protein interactions for RNA: ENST00000484621.1

RNF38-207, Transcript of ring finger protein 38, humanhuman

TSL 4

Gene RNF38, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-207ENST00000484621 NISCHQ9Y2I1 1504 aa43.56■■■■■ 4.56
RNF38-207ENST00000484621 ABCC9O60706 1549 aa39.86■■■■□ 3.97
RNF38-207ENST00000484621 CCDC180Q9P1Z9 1646 aa39.02■■■■□ 3.84
RNF38-207ENST00000484621 DNAJC5BQ9UF47 199 aa38.13■■■■□ 3.69
RNF38-207ENST00000484621 RB1CC1Q8TDY2 1594 aa37.46■■■■□ 3.59
RNF38-207ENST00000484621 NACADO15069 1562 aa37■■■■□ 3.51
RNF38-207ENST00000484621 PABPN1Q86U42 306 aaKnown RBP eCLIP36.99■■■■□ 3.51
RNF38-207ENST00000484621 UNC13AQ9UPW8 1703 aa36.85■■■■□ 3.49
RNF38-207ENST00000484621 DCAF8L2P0C7V8 631 aa36.7■■■■□ 3.47
RNF38-207ENST00000484621 BICRAQ9NZM4 1560 aa36.61■■■■□ 3.45
RNF38-207ENST00000484621 ZCCHC6Q5VYS8 1495 aaKnown RBP36.24■■■■□ 3.39
RNF38-207ENST00000484621 MYO15BQ96JP2 1530 aa36.2■■■■□ 3.39
RNF38-207ENST00000484621 DCAF1Q9Y4B6 1507 aa36■■■■□ 3.35
RNF38-207ENST00000484621 CC2D2AQ9P2K1 1620 aa35.95■■■■□ 3.35
RNF38-207ENST00000484621 CECR2Q9BXF3 1484 aa35.91■■■■□ 3.34
RNF38-207ENST00000484621 SHROOM4Q9ULL8 1493 aa35.72■■■■□ 3.31
RNF38-207ENST00000484621 SCRIBQ14160 1630 aa35.67■■■■□ 3.3
RNF38-207ENST00000484621 EIF4G1Q04637 1599 aaKnown RBP35.67■■■■□ 3.3
RNF38-207ENST00000484621 DNAJC5Q9H3Z4 198 aa35.32■■■■□ 3.24
RNF38-207ENST00000484621 CUX2O14529 1486 aa34.48■■■■□ 3.11
RNF38-207ENST00000484621 ERCC6Q03468 1493 aa34.33■■■■□ 3.09
RNF38-207ENST00000484621 NCAPD3P42695 1498 aa34.2■■■■□ 3.07
RNF38-207ENST00000484621 NESP48681 1621 aa34.11■■■■□ 3.05
RNF38-207ENST00000484621 ATAD2BQ9ULI0 1458 aa34.07■■■■□ 3.04
RNF38-207ENST00000484621 HMGXB3Q12766 1538 aa33.9■■■■□ 3.02
RNF38-207ENST00000484621 SMARCA4P51532 1647 aa33.89■■■■□ 3.02
RNF38-207ENST00000484621 THOC2Q8NI27 1593 aaKnown RBP33.87■■■■□ 3.01
RNF38-207ENST00000484621 SMARCA2P51531 1590 aa33.82■■■■□ 3
RNF38-207ENST00000484621 BAZ1AQ9NRL2 1556 aaPredicted RBP33.79■■■■□ 3
RNF38-207ENST00000484621 BAZ1BQ9UIG0 1483 aaKnown RBP33.65■■■□□ 2.98
RNF38-207ENST00000484621 KIF21AQ7Z4S6 1674 aa33.61■■■□□ 2.97
RNF38-207ENST00000484621 MROH2BQ7Z745 1585 aa33.57■■■□□ 2.96
RNF38-207ENST00000484621 TRIM41Q8WV44 630 aa33.55■■■□□ 2.96
RNF38-207ENST00000484621 LAMC3Q9Y6N6 1575 aa33.53■■■□□ 2.96
RNF38-207ENST00000484621 PEG3Q9GZU2 1588 aa33.49■■■□□ 2.95
RNF38-207ENST00000484621 PDS5BQ9NTI5 1447 aa33.29■■■□□ 2.92
RNF38-207ENST00000484621 WIZO95785 1651 aa33.25■■■□□ 2.91
RNF38-207ENST00000484621 MRC2Q9UBG0 1479 aa33.18■■■□□ 2.9
RNF38-207ENST00000484621 WDR62O43379 1518 aa33.15■■■□□ 2.9
RNF38-207ENST00000484621 CADPSQ9ULU8 1353 aa33.12■■■□□ 2.89
RNF38-207ENST00000484621 RSF1Q96T23 1441 aaPredicted RBP33.11■■■□□ 2.89
RNF38-207ENST00000484621 CEP164Q9UPV0 1460 aa32.87■■■□□ 2.85
RNF38-207ENST00000484621 TOP2AP11388 1531 aaKnown RBP32.85■■■□□ 2.85
RNF38-207ENST00000484621 FANCD2Q9BXW9 1451 aa32.8■■■□□ 2.84
RNF38-207ENST00000484621 OSCARQ8IYS5 282 aa32.72■■■□□ 2.83
RNF38-207ENST00000484621 URB2Q14146 1524 aaKnown RBP32.68■■■□□ 2.82
RNF38-207ENST00000484621 CFTRP13569 1480 aa32.62■■■□□ 2.81
RNF38-207ENST00000484621 RIMBP3CA6NJZ7 1639 aa32.61■■■□□ 2.81
RNF38-207ENST00000484621 RIMBP3BA6NNM3 1639 aa32.61■■■□□ 2.81
RNF38-207ENST00000484621 RIMBP3Q9UFD9 1639 aa32.61■■■□□ 2.81
RNF38-207ENST00000484621 CCDC88BA6NC98 1476 aa32.47■■■□□ 2.79
RNF38-207ENST00000484621 ZNF608Q9ULD9 1512 aaPredicted RBP32.42■■■□□ 2.78
RNF38-207ENST00000484621 ARHGEF11O15085 1522 aa32.38■■■□□ 2.77
RNF38-207ENST00000484621 PRDM2Q13029 1718 aa32.32■■■□□ 2.76
RNF38-207ENST00000484621 SUPT5HO00267 1087 aaKnown RBP32.24■■■□□ 2.75
RNF38-207ENST00000484621 IFT140Q96RY7 1462 aa32.22■■■□□ 2.75
RNF38-207ENST00000484621 EIF4G3O43432 1585 aaKnown RBP32.16■■■□□ 2.74
RNF38-207ENST00000484621 TOPBP1Q92547 1522 aa32.14■■■□□ 2.74
RNF38-207ENST00000484621 CYB5RLQ6IPT4 315 aa32.11■■■□□ 2.73
RNF38-207ENST00000484621 CHD1O14646 1710 aa32.09■■■□□ 2.73
RNF38-207ENST00000484621 ARAP1Q96P48 1450 aa32.07■■■□□ 2.72
RNF38-207ENST00000484621 AQRO60306 1485 aaKnown RBP eCLIP31.97■■■□□ 2.71
RNF38-207ENST00000484621 TARBP1Q13395 1621 aaKnown RBP31.94■■■□□ 2.7
RNF38-207ENST00000484621 TRHP20396 242 aaPredicted RBP31.94■■■□□ 2.7
RNF38-207ENST00000484621 DNMBPQ6XZF7 1577 aa31.92■■■□□ 2.7
RNF38-207ENST00000484621 ABCC8Q09428 1581 aa31.81■■■□□ 2.68
RNF38-207ENST00000484621 FBLN2P98095 1184 aa31.8■■■□□ 2.68
RNF38-207ENST00000484621 POLA1P09884 1462 aaPredicted RBP31.77■■■□□ 2.68
RNF38-207ENST00000484621 RAD54L2Q9Y4B4 1467 aa31.74■■■□□ 2.67
RNF38-207ENST00000484621 CLASP1Q7Z460 1538 aa31.67■■■□□ 2.66
RNF38-207ENST00000484621 TDRD9Q8NDG6 1382 aaKnown RBP31.65■■■□□ 2.66
RNF38-207ENST00000484621 SNAPC4Q5SXM2 1469 aa31.63■■■□□ 2.65
RNF38-207ENST00000484621 SOGA1O94964 1423 aa31.53■■■□□ 2.64
RNF38-207ENST00000484621 CUX1P39880 1505 aa31.51■■■□□ 2.63
RNF38-207ENST00000484621 FGD5Q6ZNL6 1462 aa31.48■■■□□ 2.63
RNF38-207ENST00000484621 SYNJ1O43426 1573 aa31.45■■■□□ 2.63
RNF38-207ENST00000484621 AEBP2Q6ZN18 517 aaPredicted RBP31.45■■■□□ 2.63
RNF38-207ENST00000484621 CHMP7Q8WUX9 453 aaPredicted RBP31.38■■■□□ 2.61
RNF38-207ENST00000484621 MAGI1Q96QZ7 1491 aaPredicted RBP31.38■■■□□ 2.61
RNF38-207ENST00000484621 WDR97A6NE52 1622 aa31.36■■■□□ 2.61
RNF38-207ENST00000484621 GRIN2BQ13224 1484 aa31.33■■■□□ 2.61
RNF38-207ENST00000484621 SYNJ2O15056 1496 aa31.32■■■□□ 2.6
RNF38-207ENST00000484621 GAPVD1Q14C86 1478 aa31.31■■■□□ 2.6
RNF38-207ENST00000484621 PBRM1Q86U86 1689 aa31.29■■■□□ 2.6
RNF38-207ENST00000484621 ERCC6L2Q5T890 1561 aa31.26■■■□□ 2.6
RNF38-207ENST00000484621 WRNQ14191 1432 aaPredicted RBP eCLIP31.25■■■□□ 2.59
RNF38-207ENST00000484621 BIVM-ERCC5R4GMW8 1640 aa31.21■■■□□ 2.59
RNF38-207ENST00000484621 TOP2BQ02880 1626 aa31.2■■■□□ 2.59
RNF38-207ENST00000484621 ABCA5Q8WWZ7 1642 aa31.12■■■□□ 2.57
RNF38-207ENST00000484621 ABCA10Q8WWZ4 1543 aa31.11■■■□□ 2.57
RNF38-207ENST00000484621 CEP170Q5SW79 1584 aa31■■■□□ 2.55
RNF38-207ENST00000484621 GRIN2AQ12879 1464 aa30.98■■■□□ 2.55
RNF38-207ENST00000484621 KIF13AQ9H1H9 1805 aa30.94■■■□□ 2.54
RNF38-207ENST00000484621 ADAMTS12P58397 1594 aa30.94■■■□□ 2.54
RNF38-207ENST00000484621 NUP160Q12769 1436 aa30.9■■■□□ 2.54
RNF38-207ENST00000484621 SHROOM2Q13796 1616 aa30.89■■■□□ 2.54
RNF38-207ENST00000484621 ERICH3Q5RHP9 1530 aa30.75■■■□□ 2.51
RNF38-207ENST00000484621 FHAD1B1AJZ9 1412 aa30.69■■■□□ 2.5
RNF38-207ENST00000484621 PRG4Q92954 1404 aaPredicted RBP30.65■■■□□ 2.5
RNF38-207ENST00000484621 KIF27Q86VH2 1401 aa30.62■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms