RNA–Protein interactions for RNA: ENST00000467913.1

PLXNB1-210, Transcript of plexin B1, humanhuman

TSL 2

Gene PLXNB1, Length 688 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-210ENST00000467913 NISCHQ9Y2I1 1504 aa44.4■■■■■ 4.7
PLXNB1-210ENST00000467913 ABCC9O60706 1549 aa40.17■■■■■ 4.02
PLXNB1-210ENST00000467913 CCDC180Q9P1Z9 1646 aa39.88■■■■□ 3.97
PLXNB1-210ENST00000467913 RB1CC1Q8TDY2 1594 aa38.06■■■■□ 3.68
PLXNB1-210ENST00000467913 DNAJC5BQ9UF47 199 aa37.87■■■■□ 3.65
PLXNB1-210ENST00000467913 NACADO15069 1562 aa37.73■■■■□ 3.63
PLXNB1-210ENST00000467913 DCAF8L2P0C7V8 631 aa37.59■■■■□ 3.61
PLXNB1-210ENST00000467913 PABPN1Q86U42 306 aaKnown RBP eCLIP37.37■■■■□ 3.57
PLXNB1-210ENST00000467913 UNC13AQ9UPW8 1703 aa37.27■■■■□ 3.56
PLXNB1-210ENST00000467913 MYO15BQ96JP2 1530 aa37.11■■■■□ 3.53
PLXNB1-210ENST00000467913 BICRAQ9NZM4 1560 aa37.04■■■■□ 3.52
PLXNB1-210ENST00000467913 ZCCHC6Q5VYS8 1495 aaKnown RBP36.78■■■■□ 3.48
PLXNB1-210ENST00000467913 DCAF1Q9Y4B6 1507 aa36.59■■■■□ 3.45
PLXNB1-210ENST00000467913 SCRIBQ14160 1630 aa36.45■■■■□ 3.42
PLXNB1-210ENST00000467913 SHROOM4Q9ULL8 1493 aa36.37■■■■□ 3.41
PLXNB1-210ENST00000467913 CC2D2AQ9P2K1 1620 aa36.25■■■■□ 3.39
PLXNB1-210ENST00000467913 CECR2Q9BXF3 1484 aa36.17■■■■□ 3.38
PLXNB1-210ENST00000467913 EIF4G1Q04637 1599 aaKnown RBP36.11■■■■□ 3.37
PLXNB1-210ENST00000467913 NCAPD3P42695 1498 aa34.85■■■■□ 3.17
PLXNB1-210ENST00000467913 DNAJC5Q9H3Z4 198 aa34.8■■■■□ 3.16
PLXNB1-210ENST00000467913 ATAD2BQ9ULI0 1458 aa34.77■■■■□ 3.16
PLXNB1-210ENST00000467913 SMARCA4P51532 1647 aa34.69■■■■□ 3.14
PLXNB1-210ENST00000467913 ERCC6Q03468 1493 aa34.65■■■■□ 3.14
PLXNB1-210ENST00000467913 SMARCA2P51531 1590 aa34.62■■■■□ 3.13
PLXNB1-210ENST00000467913 CUX2O14529 1486 aa34.59■■■■□ 3.13
PLXNB1-210ENST00000467913 HMGXB3Q12766 1538 aa34.59■■■■□ 3.13
PLXNB1-210ENST00000467913 NESP48681 1621 aa34.48■■■■□ 3.11
PLXNB1-210ENST00000467913 BAZ1AQ9NRL2 1556 aaPredicted RBP34.45■■■■□ 3.1
PLXNB1-210ENST00000467913 BAZ1BQ9UIG0 1483 aaKnown RBP34.41■■■■□ 3.1
PLXNB1-210ENST00000467913 PEG3Q9GZU2 1588 aa34.31■■■■□ 3.08
PLXNB1-210ENST00000467913 MROH2BQ7Z745 1585 aa34.26■■■■□ 3.07
PLXNB1-210ENST00000467913 THOC2Q8NI27 1593 aaKnown RBP34.13■■■■□ 3.05
PLXNB1-210ENST00000467913 LAMC3Q9Y6N6 1575 aa34.1■■■■□ 3.05
PLXNB1-210ENST00000467913 KIF21AQ7Z4S6 1674 aa34■■■■□ 3.03
PLXNB1-210ENST00000467913 PDS5BQ9NTI5 1447 aa33.88■■■■□ 3.01
PLXNB1-210ENST00000467913 WIZO95785 1651 aa33.84■■■■□ 3.01
PLXNB1-210ENST00000467913 CADPSQ9ULU8 1353 aa33.79■■■■□ 3
PLXNB1-210ENST00000467913 MRC2Q9UBG0 1479 aa33.66■■■□□ 2.98
PLXNB1-210ENST00000467913 WDR62O43379 1518 aa33.59■■■□□ 2.97
PLXNB1-210ENST00000467913 CEP164Q9UPV0 1460 aa33.49■■■□□ 2.95
PLXNB1-210ENST00000467913 RSF1Q96T23 1441 aaPredicted RBP33.45■■■□□ 2.95
PLXNB1-210ENST00000467913 FANCD2Q9BXW9 1451 aa33.44■■■□□ 2.94
PLXNB1-210ENST00000467913 CFTRP13569 1480 aa33.38■■■□□ 2.93
PLXNB1-210ENST00000467913 TOP2AP11388 1531 aaKnown RBP33.37■■■□□ 2.93
PLXNB1-210ENST00000467913 TRIM41Q8WV44 630 aa33.29■■■□□ 2.92
PLXNB1-210ENST00000467913 URB2Q14146 1524 aaKnown RBP33.22■■■□□ 2.91
PLXNB1-210ENST00000467913 PRDM2Q13029 1718 aa33.02■■■□□ 2.88
PLXNB1-210ENST00000467913 CCDC88BA6NC98 1476 aa33■■■□□ 2.87
PLXNB1-210ENST00000467913 OSCARQ8IYS5 282 aa32.97■■■□□ 2.87
PLXNB1-210ENST00000467913 ZNF608Q9ULD9 1512 aaPredicted RBP32.86■■■□□ 2.85
PLXNB1-210ENST00000467913 TOPBP1Q92547 1522 aa32.81■■■□□ 2.84
PLXNB1-210ENST00000467913 IFT140Q96RY7 1462 aa32.8■■■□□ 2.84
PLXNB1-210ENST00000467913 RIMBP3CA6NJZ7 1639 aa32.66■■■□□ 2.82
PLXNB1-210ENST00000467913 RIMBP3BA6NNM3 1639 aa32.66■■■□□ 2.82
PLXNB1-210ENST00000467913 RIMBP3Q9UFD9 1639 aa32.66■■■□□ 2.82
PLXNB1-210ENST00000467913 EIF4G3O43432 1585 aaKnown RBP32.65■■■□□ 2.82
PLXNB1-210ENST00000467913 DNMBPQ6XZF7 1577 aa32.65■■■□□ 2.82
PLXNB1-210ENST00000467913 ABCC8Q09428 1581 aa32.61■■■□□ 2.81
PLXNB1-210ENST00000467913 ARHGEF11O15085 1522 aa32.52■■■□□ 2.8
PLXNB1-210ENST00000467913 TARBP1Q13395 1621 aaKnown RBP32.52■■■□□ 2.8
PLXNB1-210ENST00000467913 AQRO60306 1485 aaKnown RBP eCLIP32.52■■■□□ 2.88e-8■■■■■ 61.4
PLXNB1-210ENST00000467913 POLA1P09884 1462 aaPredicted RBP32.46■■■□□ 2.79
PLXNB1-210ENST00000467913 CHD1O14646 1710 aa32.44■■■□□ 2.78
PLXNB1-210ENST00000467913 RAD54L2Q9Y4B4 1467 aa32.39■■■□□ 2.78
PLXNB1-210ENST00000467913 FBLN2P98095 1184 aa32.32■■■□□ 2.76
PLXNB1-210ENST00000467913 TDRD9Q8NDG6 1382 aaKnown RBP32.29■■■□□ 2.76
PLXNB1-210ENST00000467913 CYB5RLQ6IPT4 315 aa32.28■■■□□ 2.76
PLXNB1-210ENST00000467913 SOGA1O94964 1423 aa32.27■■■□□ 2.76
PLXNB1-210ENST00000467913 FGD5Q6ZNL6 1462 aa32.24■■■□□ 2.75
PLXNB1-210ENST00000467913 ARAP1Q96P48 1450 aa32.22■■■□□ 2.75
PLXNB1-210ENST00000467913 CUX1P39880 1505 aa32.2■■■□□ 2.74
PLXNB1-210ENST00000467913 SNAPC4Q5SXM2 1469 aa32.18■■■□□ 2.74
PLXNB1-210ENST00000467913 WDR97A6NE52 1622 aa32.08■■■□□ 2.73
PLXNB1-210ENST00000467913 CLASP1Q7Z460 1538 aa32.05■■■□□ 2.72
PLXNB1-210ENST00000467913 MAGI1Q96QZ7 1491 aaPredicted RBP32.02■■■□□ 2.72
PLXNB1-210ENST00000467913 GRIN2BQ13224 1484 aa32.01■■■□□ 2.71
PLXNB1-210ENST00000467913 CHMP7Q8WUX9 453 aaPredicted RBP32■■■□□ 2.71
PLXNB1-210ENST00000467913 TRHP20396 242 aaPredicted RBP31.98■■■□□ 2.71
PLXNB1-210ENST00000467913 SYNJ1O43426 1573 aa31.97■■■□□ 2.71
PLXNB1-210ENST00000467913 SYNJ2O15056 1496 aa31.93■■■□□ 2.7
PLXNB1-210ENST00000467913 PBRM1Q86U86 1689 aa31.92■■■□□ 2.7
PLXNB1-210ENST00000467913 GAPVD1Q14C86 1478 aa31.89■■■□□ 2.7
PLXNB1-210ENST00000467913 SUPT5HO00267 1087 aaKnown RBP31.87■■■□□ 2.69
PLXNB1-210ENST00000467913 ABCA10Q8WWZ4 1543 aa31.83■■■□□ 2.69
PLXNB1-210ENST00000467913 ABCA5Q8WWZ7 1642 aa31.82■■■□□ 2.69
PLXNB1-210ENST00000467913 WRNQ14191 1432 aaPredicted RBP eCLIP31.64■■■□□ 2.66
PLXNB1-210ENST00000467913 GRIN2AQ12879 1464 aa31.63■■■□□ 2.65
PLXNB1-210ENST00000467913 ADAMTS12P58397 1594 aa31.61■■■□□ 2.65
PLXNB1-210ENST00000467913 ERCC6L2Q5T890 1561 aa31.61■■■□□ 2.65
PLXNB1-210ENST00000467913 BIVM-ERCC5R4GMW8 1640 aa31.59■■■□□ 2.65
PLXNB1-210ENST00000467913 TOP2BQ02880 1626 aa31.58■■■□□ 2.65
PLXNB1-210ENST00000467913 CEP170Q5SW79 1584 aa31.56■■■□□ 2.64
PLXNB1-210ENST00000467913 NUP160Q12769 1436 aa31.52■■■□□ 2.64
PLXNB1-210ENST00000467913 FHAD1B1AJZ9 1412 aa31.46■■■□□ 2.63
PLXNB1-210ENST00000467913 SHROOM2Q13796 1616 aa31.4■■■□□ 2.62
PLXNB1-210ENST00000467913 ERICH3Q5RHP9 1530 aa31.39■■■□□ 2.62
PLXNB1-210ENST00000467913 PRG4Q92954 1404 aaPredicted RBP31.24■■■□□ 2.59
PLXNB1-210ENST00000467913 RUSC2Q8N2Y8 1516 aa31.18■■■□□ 2.58
PLXNB1-210ENST00000467913 JPH4Q96JJ6 628 aa31.16■■■□□ 2.58
PLXNB1-210ENST00000467913 AEBP2Q6ZN18 517 aaPredicted RBP31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms