RNA–Protein interactions for RNA: ENST00000597704.1

KHSRP-209, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 5

Gene KHSRP, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-209ENST00000597704 NISCHQ9Y2I1 1504 aa39.19■■■■□ 3.86
KHSRP-209ENST00000597704 CCDC180Q9P1Z9 1646 aa35.03■■■■□ 3.2
KHSRP-209ENST00000597704 ABCC9O60706 1549 aa34.38■■■■□ 3.09
KHSRP-209ENST00000597704 RB1CC1Q8TDY2 1594 aa33■■■□□ 2.87
KHSRP-209ENST00000597704 NACADO15069 1562 aa32.92■■■□□ 2.86
KHSRP-209ENST00000597704 DCAF8L2P0C7V8 631 aa32.7■■■□□ 2.83
KHSRP-209ENST00000597704 MYO15BQ96JP2 1530 aa32.65■■■□□ 2.82
KHSRP-209ENST00000597704 ZCCHC6Q5VYS8 1495 aaKnown RBP32.61■■■□□ 2.81
KHSRP-209ENST00000597704 UNC13AQ9UPW8 1703 aa32.44■■■□□ 2.78
KHSRP-209ENST00000597704 DCAF1Q9Y4B6 1507 aa32.43■■■□□ 2.78
KHSRP-209ENST00000597704 BICRAQ9NZM4 1560 aa32.08■■■□□ 2.73
KHSRP-209ENST00000597704 PABPN1Q86U42 306 aaKnown RBP eCLIP32.04■■■□□ 2.72
KHSRP-209ENST00000597704 SCRIBQ14160 1630 aa31.89■■■□□ 2.7
KHSRP-209ENST00000597704 DNAJC5BQ9UF47 199 aa31.77■■■□□ 2.68
KHSRP-209ENST00000597704 SHROOM4Q9ULL8 1493 aa31.65■■■□□ 2.66
KHSRP-209ENST00000597704 EIF4G1Q04637 1599 aaKnown RBP31.2■■■□□ 2.58
KHSRP-209ENST00000597704 CC2D2AQ9P2K1 1620 aa31.15■■■□□ 2.58
KHSRP-209ENST00000597704 CECR2Q9BXF3 1484 aa30.91■■■□□ 2.54
KHSRP-209ENST00000597704 SMARCA4P51532 1647 aa30.5■■■□□ 2.47
KHSRP-209ENST00000597704 BAZ1AQ9NRL2 1556 aaPredicted RBP30.38■■■□□ 2.45
KHSRP-209ENST00000597704 NCAPD3P42695 1498 aa30.35■■■□□ 2.45
KHSRP-209ENST00000597704 ATAD2BQ9ULI0 1458 aa30.34■■■□□ 2.45
KHSRP-209ENST00000597704 SMARCA2P51531 1590 aa30.3■■■□□ 2.44
KHSRP-209ENST00000597704 HMGXB3Q12766 1538 aa30.22■■■□□ 2.43
KHSRP-209ENST00000597704 MROH2BQ7Z745 1585 aa30.21■■■□□ 2.43
KHSRP-209ENST00000597704 PEG3Q9GZU2 1588 aa30.21■■■□□ 2.43
KHSRP-209ENST00000597704 BAZ1BQ9UIG0 1483 aaKnown RBP30.06■■■□□ 2.4
KHSRP-209ENST00000597704 WIZO95785 1651 aa29.91■■■□□ 2.38
KHSRP-209ENST00000597704 RSF1Q96T23 1441 aaPredicted RBP29.75■■■□□ 2.35
KHSRP-209ENST00000597704 NESP48681 1621 aa29.72■■■□□ 2.35
KHSRP-209ENST00000597704 ERCC6Q03468 1493 aa29.62■■■□□ 2.33
KHSRP-209ENST00000597704 LAMC3Q9Y6N6 1575 aa29.62■■■□□ 2.33
KHSRP-209ENST00000597704 TOP2AP11388 1531 aaKnown RBP29.55■■■□□ 2.32
KHSRP-209ENST00000597704 KIF21AQ7Z4S6 1674 aa29.46■■■□□ 2.31
KHSRP-209ENST00000597704 CUX2O14529 1486 aa29.43■■■□□ 2.3
KHSRP-209ENST00000597704 CADPSQ9ULU8 1353 aa29.42■■■□□ 2.3
KHSRP-209ENST00000597704 THOC2Q8NI27 1593 aaKnown RBP29.37■■■□□ 2.29
KHSRP-209ENST00000597704 PDS5BQ9NTI5 1447 aa29.36■■■□□ 2.29
KHSRP-209ENST00000597704 CFTRP13569 1480 aa29.23■■■□□ 2.27
KHSRP-209ENST00000597704 CCDC88BA6NC98 1476 aa29.17■■■□□ 2.26
KHSRP-209ENST00000597704 PRDM2Q13029 1718 aa29.17■■■□□ 2.26
KHSRP-209ENST00000597704 FANCD2Q9BXW9 1451 aa29.1■■■□□ 2.25
KHSRP-209ENST00000597704 MRC2Q9UBG0 1479 aa29.1■■■□□ 2.25
KHSRP-209ENST00000597704 CEP164Q9UPV0 1460 aa29.09■■■□□ 2.25
KHSRP-209ENST00000597704 WDR62O43379 1518 aa29.05■■■□□ 2.24
KHSRP-209ENST00000597704 DNAJC5Q9H3Z4 198 aa28.96■■■□□ 2.23
KHSRP-209ENST00000597704 URB2Q14146 1524 aaKnown RBP28.87■■■□□ 2.21
KHSRP-209ENST00000597704 SUPT5HO00267 1087 aaKnown RBP28.75■■■□□ 2.19
KHSRP-209ENST00000597704 TOPBP1Q92547 1522 aa28.65■■■□□ 2.18
KHSRP-209ENST00000597704 DNMBPQ6XZF7 1577 aa28.61■■■□□ 2.17
KHSRP-209ENST00000597704 ABCC8Q09428 1581 aa28.59■■■□□ 2.17
KHSRP-209ENST00000597704 IFT140Q96RY7 1462 aa28.49■■■□□ 2.15
KHSRP-209ENST00000597704 ZNF608Q9ULD9 1512 aaPredicted RBP28.41■■■□□ 2.14
KHSRP-209ENST00000597704 TARBP1Q13395 1621 aaKnown RBP28.4■■■□□ 2.14
KHSRP-209ENST00000597704 POLA1P09884 1462 aaPredicted RBP28.38■■■□□ 2.13
KHSRP-209ENST00000597704 CUX1P39880 1505 aa28.36■■■□□ 2.13
KHSRP-209ENST00000597704 EIF4G3O43432 1585 aaKnown RBP28.33■■■□□ 2.12
KHSRP-209ENST00000597704 FGD5Q6ZNL6 1462 aa28.27■■■□□ 2.12
KHSRP-209ENST00000597704 RAD54L2Q9Y4B4 1467 aa28.25■■■□□ 2.11
KHSRP-209ENST00000597704 SOGA1O94964 1423 aa28.22■■■□□ 2.11
KHSRP-209ENST00000597704 AQRO60306 1485 aaKnown RBP eCLIP28.19■■■□□ 2.14e-9■■■■■ 32.6
KHSRP-209ENST00000597704 WDR97A6NE52 1622 aa28.16■■■□□ 2.1
KHSRP-209ENST00000597704 OSCARQ8IYS5 282 aa28.11■■■□□ 2.09
KHSRP-209ENST00000597704 BIVM-ERCC5R4GMW8 1640 aa28.1■■■□□ 2.09
KHSRP-209ENST00000597704 TDRD9Q8NDG6 1382 aaKnown RBP28.09■■■□□ 2.09
KHSRP-209ENST00000597704 CHD1O14646 1710 aa28.08■■■□□ 2.09
KHSRP-209ENST00000597704 TOP2BQ02880 1626 aa28.07■■■□□ 2.08
KHSRP-209ENST00000597704 SYNJ1O43426 1573 aa28.05■■■□□ 2.08
KHSRP-209ENST00000597704 WRNQ14191 1432 aaPredicted RBP eCLIP28.03■■■□□ 2.08
KHSRP-209ENST00000597704 ABCA10Q8WWZ4 1543 aa28■■■□□ 2.07
KHSRP-209ENST00000597704 PBRM1Q86U86 1689 aa27.98■■■□□ 2.07
KHSRP-209ENST00000597704 ABCA5Q8WWZ7 1642 aa27.96■■■□□ 2.07
KHSRP-209ENST00000597704 SNAPC4Q5SXM2 1469 aa27.94■■■□□ 2.06
KHSRP-209ENST00000597704 GRIN2BQ13224 1484 aa27.93■■■□□ 2.06
KHSRP-209ENST00000597704 GAPVD1Q14C86 1478 aa27.91■■■□□ 2.06
KHSRP-209ENST00000597704 MAGI1Q96QZ7 1491 aaPredicted RBP27.89■■■□□ 2.06
KHSRP-209ENST00000597704 FBLN2P98095 1184 aa27.82■■■□□ 2.04
KHSRP-209ENST00000597704 RIMBP3CA6NJZ7 1639 aa27.81■■■□□ 2.04
KHSRP-209ENST00000597704 RIMBP3BA6NNM3 1639 aa27.81■■■□□ 2.04
KHSRP-209ENST00000597704 RIMBP3Q9UFD9 1639 aa27.81■■■□□ 2.04
KHSRP-209ENST00000597704 SYNJ2O15056 1496 aa27.78■■■□□ 2.04
KHSRP-209ENST00000597704 ARHGEF11O15085 1522 aa27.73■■■□□ 2.03
KHSRP-209ENST00000597704 CHMP7Q8WUX9 453 aaPredicted RBP27.72■■■□□ 2.03
KHSRP-209ENST00000597704 CLASP1Q7Z460 1538 aa27.7■■■□□ 2.02
KHSRP-209ENST00000597704 ADAMTS12P58397 1594 aa27.69■■■□□ 2.02
KHSRP-209ENST00000597704 TRIM41Q8WV44 630 aa27.67■■■□□ 2.02
KHSRP-209ENST00000597704 ERICH3Q5RHP9 1530 aa27.66■■■□□ 2.02
KHSRP-209ENST00000597704 GRIN2AQ12879 1464 aa27.58■■■□□ 2.01
KHSRP-209ENST00000597704 FHAD1B1AJZ9 1412 aa27.57■■■□□ 2
KHSRP-209ENST00000597704 CEP170Q5SW79 1584 aa27.5■■□□□ 1.99
KHSRP-209ENST00000597704 ARAP1Q96P48 1450 aa27.5■■□□□ 1.99
KHSRP-209ENST00000597704 NUP160Q12769 1436 aa27.49■■□□□ 1.99
KHSRP-209ENST00000597704 KIF27Q86VH2 1401 aa27.45■■□□□ 1.98
KHSRP-209ENST00000597704 CYB5RLQ6IPT4 315 aa27.41■■□□□ 1.98
KHSRP-209ENST00000597704 CUL7Q14999 1698 aa27.4■■□□□ 1.98
KHSRP-209ENST00000597704 IGF1RP08069 1367 aa27.38■■□□□ 1.97
KHSRP-209ENST00000597704 SHROOM2Q13796 1616 aa27.37■■□□□ 1.97
KHSRP-209ENST00000597704 ERCC6L2Q5T890 1561 aa27.31■■□□□ 1.96
KHSRP-209ENST00000597704 RUSC2Q8N2Y8 1516 aa27.28■■□□□ 1.96
KHSRP-209ENST00000597704 CARMIL1Q5VZK9 1371 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms