RNA–Protein interactions for RNA: ENST00000587654.5

TNPO2-208, Transcript of transportin 2, humanhuman

TSL 4

Gene TNPO2, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-208ENST00000587654 NISCHQ9Y2I1 1504 aa40.04■■■■■ 4
TNPO2-208ENST00000587654 ABCC9O60706 1549 aa36.22■■■■□ 3.39
TNPO2-208ENST00000587654 CCDC180Q9P1Z9 1646 aa36.16■■■■□ 3.38
TNPO2-208ENST00000587654 RB1CC1Q8TDY2 1594 aa34.45■■■■□ 3.1
TNPO2-208ENST00000587654 NACADO15069 1562 aa34.15■■■■□ 3.06
TNPO2-208ENST00000587654 DNAJC5BQ9UF47 199 aa34.07■■■■□ 3.04
TNPO2-208ENST00000587654 UNC13AQ9UPW8 1703 aa33.77■■■■□ 3
TNPO2-208ENST00000587654 DCAF8L2P0C7V8 631 aa33.68■■■□□ 2.98
TNPO2-208ENST00000587654 MYO15BQ96JP2 1530 aa33.6■■■□□ 2.97
TNPO2-208ENST00000587654 PABPN1Q86U42 306 aaKnown RBP eCLIP33.58■■■□□ 2.97
TNPO2-208ENST00000587654 BICRAQ9NZM4 1560 aa33.47■■■□□ 2.95
TNPO2-208ENST00000587654 ZCCHC6Q5VYS8 1495 aaKnown RBP33.18■■■□□ 2.9
TNPO2-208ENST00000587654 DCAF1Q9Y4B6 1507 aa33.1■■■□□ 2.89
TNPO2-208ENST00000587654 SHROOM4Q9ULL8 1493 aa33.01■■■□□ 2.88
TNPO2-208ENST00000587654 SCRIBQ14160 1630 aa32.88■■■□□ 2.85
TNPO2-208ENST00000587654 CC2D2AQ9P2K1 1620 aa32.77■■■□□ 2.84
TNPO2-208ENST00000587654 CECR2Q9BXF3 1484 aa32.66■■■□□ 2.82
TNPO2-208ENST00000587654 EIF4G1Q04637 1599 aaKnown RBP32.65■■■□□ 2.82
TNPO2-208ENST00000587654 NCAPD3P42695 1498 aa31.46■■■□□ 2.63
TNPO2-208ENST00000587654 DNAJC5Q9H3Z4 198 aa31.45■■■□□ 2.63
TNPO2-208ENST00000587654 CUX2O14529 1486 aa31.35■■■□□ 2.61
TNPO2-208ENST00000587654 ATAD2BQ9ULI0 1458 aa31.35■■■□□ 2.61
TNPO2-208ENST00000587654 SMARCA4P51532 1647 aa31.35■■■□□ 2.61
TNPO2-208ENST00000587654 HMGXB3Q12766 1538 aa31.3■■■□□ 2.6
TNPO2-208ENST00000587654 SMARCA2P51531 1590 aa31.3■■■□□ 2.6
TNPO2-208ENST00000587654 ERCC6Q03468 1493 aa31.29■■■□□ 2.6
TNPO2-208ENST00000587654 BAZ1AQ9NRL2 1556 aaPredicted RBP31.12■■■□□ 2.57
TNPO2-208ENST00000587654 NESP48681 1621 aa31.06■■■□□ 2.56
TNPO2-208ENST00000587654 BAZ1BQ9UIG0 1483 aaKnown RBP31.06■■■□□ 2.56
TNPO2-208ENST00000587654 PEG3Q9GZU2 1588 aa31.04■■■□□ 2.56
TNPO2-208ENST00000587654 THOC2Q8NI27 1593 aaKnown RBP30.91■■■□□ 2.54
TNPO2-208ENST00000587654 LAMC3Q9Y6N6 1575 aa30.87■■■□□ 2.53
TNPO2-208ENST00000587654 MROH2BQ7Z745 1585 aa30.85■■■□□ 2.53
TNPO2-208ENST00000587654 KIF21AQ7Z4S6 1674 aa30.77■■■□□ 2.52
TNPO2-208ENST00000587654 PDS5BQ9NTI5 1447 aa30.61■■■□□ 2.49
TNPO2-208ENST00000587654 WIZO95785 1651 aa30.51■■■□□ 2.47
TNPO2-208ENST00000587654 CADPSQ9ULU8 1353 aa30.46■■■□□ 2.47
TNPO2-208ENST00000587654 MRC2Q9UBG0 1479 aa30.42■■■□□ 2.46
TNPO2-208ENST00000587654 WDR62O43379 1518 aa30.39■■■□□ 2.46
TNPO2-208ENST00000587654 CEP164Q9UPV0 1460 aa30.25■■■□□ 2.43
TNPO2-208ENST00000587654 FANCD2Q9BXW9 1451 aa30.17■■■□□ 2.42
TNPO2-208ENST00000587654 CFTRP13569 1480 aa30.12■■■□□ 2.41
TNPO2-208ENST00000587654 TOP2AP11388 1531 aaKnown RBP30.12■■■□□ 2.41
TNPO2-208ENST00000587654 RSF1Q96T23 1441 aaPredicted RBP30.08■■■□□ 2.41
TNPO2-208ENST00000587654 PRDM2Q13029 1718 aa29.99■■■□□ 2.39
TNPO2-208ENST00000587654 TRIM41Q8WV44 630 aa29.97■■■□□ 2.39
TNPO2-208ENST00000587654 URB2Q14146 1524 aaKnown RBP29.96■■■□□ 2.39
TNPO2-208ENST00000587654 OSCARQ8IYS5 282 aa29.73■■■□□ 2.35
TNPO2-208ENST00000587654 CCDC88BA6NC98 1476 aa29.69■■■□□ 2.34
TNPO2-208ENST00000587654 IFT140Q96RY7 1462 aa29.64■■■□□ 2.34
TNPO2-208ENST00000587654 ZNF608Q9ULD9 1512 aaPredicted RBP29.61■■■□□ 2.33
TNPO2-208ENST00000587654 TOPBP1Q92547 1522 aa29.6■■■□□ 2.33
TNPO2-208ENST00000587654 RIMBP3CA6NJZ7 1639 aa29.56■■■□□ 2.32
TNPO2-208ENST00000587654 RIMBP3BA6NNM3 1639 aa29.56■■■□□ 2.32
TNPO2-208ENST00000587654 RIMBP3Q9UFD9 1639 aa29.56■■■□□ 2.32
TNPO2-208ENST00000587654 EIF4G3O43432 1585 aaKnown RBP29.52■■■□□ 2.32
TNPO2-208ENST00000587654 DNMBPQ6XZF7 1577 aa29.51■■■□□ 2.31
TNPO2-208ENST00000587654 ABCC8Q09428 1581 aa29.48■■■□□ 2.31
TNPO2-208ENST00000587654 ARHGEF11O15085 1522 aa29.4■■■□□ 2.3
TNPO2-208ENST00000587654 TARBP1Q13395 1621 aaKnown RBP29.39■■■□□ 2.3
TNPO2-208ENST00000587654 CHD1O14646 1710 aa29.37■■■□□ 2.29
TNPO2-208ENST00000587654 POLA1P09884 1462 aaPredicted RBP29.28■■■□□ 2.28
TNPO2-208ENST00000587654 AQRO60306 1485 aaKnown RBP eCLIP29.26■■■□□ 2.279e-8■■■■□ 21.4
TNPO2-208ENST00000587654 RAD54L2Q9Y4B4 1467 aa29.14■■■□□ 2.26
TNPO2-208ENST00000587654 WDR97A6NE52 1622 aa29.12■■■□□ 2.25
TNPO2-208ENST00000587654 ARAP1Q96P48 1450 aa29.1■■■□□ 2.25
TNPO2-208ENST00000587654 FGD5Q6ZNL6 1462 aa29.06■■■□□ 2.24
TNPO2-208ENST00000587654 SOGA1O94964 1423 aa29.06■■■□□ 2.24
TNPO2-208ENST00000587654 CYB5RLQ6IPT4 315 aa29.04■■■□□ 2.24
TNPO2-208ENST00000587654 SNAPC4Q5SXM2 1469 aa29.04■■■□□ 2.24
TNPO2-208ENST00000587654 FBLN2P98095 1184 aa29.03■■■□□ 2.24
TNPO2-208ENST00000587654 TDRD9Q8NDG6 1382 aaKnown RBP29.02■■■□□ 2.24
TNPO2-208ENST00000587654 CUX1P39880 1505 aa29.02■■■□□ 2.24
TNPO2-208ENST00000587654 CLASP1Q7Z460 1538 aa28.99■■■□□ 2.23
TNPO2-208ENST00000587654 MAGI1Q96QZ7 1491 aaPredicted RBP28.95■■■□□ 2.22
TNPO2-208ENST00000587654 SYNJ1O43426 1573 aa28.93■■■□□ 2.22
TNPO2-208ENST00000587654 PBRM1Q86U86 1689 aa28.9■■■□□ 2.22
TNPO2-208ENST00000587654 GRIN2BQ13224 1484 aa28.89■■■□□ 2.22
TNPO2-208ENST00000587654 SYNJ2O15056 1496 aa28.84■■■□□ 2.21
TNPO2-208ENST00000587654 CHMP7Q8WUX9 453 aaPredicted RBP28.8■■■□□ 2.2
TNPO2-208ENST00000587654 TRHP20396 242 aaPredicted RBP28.79■■■□□ 2.2
TNPO2-208ENST00000587654 ABCA5Q8WWZ7 1642 aa28.77■■■□□ 2.2
TNPO2-208ENST00000587654 GAPVD1Q14C86 1478 aa28.75■■■□□ 2.19
TNPO2-208ENST00000587654 ABCA10Q8WWZ4 1543 aa28.73■■■□□ 2.19
TNPO2-208ENST00000587654 ADAMTS12P58397 1594 aa28.58■■■□□ 2.17
TNPO2-208ENST00000587654 BIVM-ERCC5R4GMW8 1640 aa28.56■■■□□ 2.16
TNPO2-208ENST00000587654 GRIN2AQ12879 1464 aa28.54■■■□□ 2.16
TNPO2-208ENST00000587654 TOP2BQ02880 1626 aa28.51■■■□□ 2.15
TNPO2-208ENST00000587654 WRNQ14191 1432 aaPredicted RBP eCLIP28.51■■■□□ 2.15
TNPO2-208ENST00000587654 CEP170Q5SW79 1584 aa28.5■■■□□ 2.15
TNPO2-208ENST00000587654 ERCC6L2Q5T890 1561 aa28.49■■■□□ 2.15
TNPO2-208ENST00000587654 SUPT5HO00267 1087 aaKnown RBP28.46■■■□□ 2.15
TNPO2-208ENST00000587654 NUP160Q12769 1436 aa28.45■■■□□ 2.15
TNPO2-208ENST00000587654 SHROOM2Q13796 1616 aa28.43■■■□□ 2.14
TNPO2-208ENST00000587654 FHAD1B1AJZ9 1412 aa28.37■■■□□ 2.13
TNPO2-208ENST00000587654 ERICH3Q5RHP9 1530 aa28.37■■■□□ 2.13
TNPO2-208ENST00000587654 RUSC2Q8N2Y8 1516 aa28.19■■■□□ 2.1
TNPO2-208ENST00000587654 KIF13AQ9H1H9 1805 aa28.18■■■□□ 2.1
TNPO2-208ENST00000587654 PRG4Q92954 1404 aaPredicted RBP28.14■■■□□ 2.1
TNPO2-208ENST00000587654 AEBP2Q6ZN18 517 aaPredicted RBP28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms