RNA–Protein interactions for RNA: ENST00000595258.1

KHSRP-206, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 5

Gene KHSRP, Length 672 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-206ENST00000595258 NISCHQ9Y2I1 1504 aa41.23■■■■■ 4.19
KHSRP-206ENST00000595258 ABCC9O60706 1549 aa38.03■■■■□ 3.68
KHSRP-206ENST00000595258 CCDC180Q9P1Z9 1646 aa37.25■■■■□ 3.55
KHSRP-206ENST00000595258 DNAJC5BQ9UF47 199 aa36.51■■■■□ 3.44
KHSRP-206ENST00000595258 RB1CC1Q8TDY2 1594 aa35.81■■■■□ 3.32
KHSRP-206ENST00000595258 NACADO15069 1562 aa35.41■■■■□ 3.26
KHSRP-206ENST00000595258 PABPN1Q86U42 306 aaKnown RBP eCLIP35.32■■■■□ 3.24
KHSRP-206ENST00000595258 UNC13AQ9UPW8 1703 aa35.09■■■■□ 3.21
KHSRP-206ENST00000595258 DCAF8L2P0C7V8 631 aa35.01■■■■□ 3.2
KHSRP-206ENST00000595258 BICRAQ9NZM4 1560 aa34.95■■■■□ 3.18
KHSRP-206ENST00000595258 MYO15BQ96JP2 1530 aa34.73■■■■□ 3.15
KHSRP-206ENST00000595258 CECR2Q9BXF3 1484 aa34.33■■■■□ 3.09
KHSRP-206ENST00000595258 CC2D2AQ9P2K1 1620 aa34.32■■■■□ 3.08
KHSRP-206ENST00000595258 SHROOM4Q9ULL8 1493 aa34.27■■■■□ 3.08
KHSRP-206ENST00000595258 EIF4G1Q04637 1599 aaKnown RBP34.07■■■■□ 3.05
KHSRP-206ENST00000595258 ZCCHC6Q5VYS8 1495 aaKnown RBP34.01■■■■□ 3.04
KHSRP-206ENST00000595258 DCAF1Q9Y4B6 1507 aa34.01■■■■□ 3.04
KHSRP-206ENST00000595258 DNAJC5Q9H3Z4 198 aa33.98■■■■□ 3.03
KHSRP-206ENST00000595258 SCRIBQ14160 1630 aa33.9■■■■□ 3.02
KHSRP-206ENST00000595258 CUX2O14529 1486 aa33.05■■■□□ 2.88
KHSRP-206ENST00000595258 ERCC6Q03468 1493 aa32.8■■■□□ 2.84
KHSRP-206ENST00000595258 NCAPD3P42695 1498 aa32.77■■■□□ 2.84
KHSRP-206ENST00000595258 ATAD2BQ9ULI0 1458 aa32.55■■■□□ 2.8
KHSRP-206ENST00000595258 NESP48681 1621 aa32.51■■■□□ 2.8
KHSRP-206ENST00000595258 HMGXB3Q12766 1538 aa32.41■■■□□ 2.78
KHSRP-206ENST00000595258 SMARCA2P51531 1590 aa32.34■■■□□ 2.77
KHSRP-206ENST00000595258 SMARCA4P51532 1647 aa32.3■■■□□ 2.76
KHSRP-206ENST00000595258 THOC2Q8NI27 1593 aaKnown RBP32.3■■■□□ 2.76
KHSRP-206ENST00000595258 BAZ1BQ9UIG0 1483 aaKnown RBP32.12■■■□□ 2.73
KHSRP-206ENST00000595258 LAMC3Q9Y6N6 1575 aa32.07■■■□□ 2.72
KHSRP-206ENST00000595258 TRIM41Q8WV44 630 aa32.06■■■□□ 2.72
KHSRP-206ENST00000595258 PEG3Q9GZU2 1588 aa32.03■■■□□ 2.72
KHSRP-206ENST00000595258 KIF21AQ7Z4S6 1674 aa32.01■■■□□ 2.71
KHSRP-206ENST00000595258 BAZ1AQ9NRL2 1556 aaPredicted RBP31.99■■■□□ 2.71
KHSRP-206ENST00000595258 PDS5BQ9NTI5 1447 aa31.9■■■□□ 2.7
KHSRP-206ENST00000595258 MROH2BQ7Z745 1585 aa31.79■■■□□ 2.68
KHSRP-206ENST00000595258 CADPSQ9ULU8 1353 aa31.71■■■□□ 2.67
KHSRP-206ENST00000595258 MRC2Q9UBG0 1479 aa31.7■■■□□ 2.66
KHSRP-206ENST00000595258 WDR62O43379 1518 aa31.68■■■□□ 2.66
KHSRP-206ENST00000595258 OSCARQ8IYS5 282 aa31.43■■■□□ 2.62
KHSRP-206ENST00000595258 CEP164Q9UPV0 1460 aa31.39■■■□□ 2.62
KHSRP-206ENST00000595258 WIZO95785 1651 aa31.35■■■□□ 2.61
KHSRP-206ENST00000595258 FANCD2Q9BXW9 1451 aa31.33■■■□□ 2.61
KHSRP-206ENST00000595258 CFTRP13569 1480 aa31.21■■■□□ 2.59
KHSRP-206ENST00000595258 URB2Q14146 1524 aaKnown RBP31.18■■■□□ 2.58
KHSRP-206ENST00000595258 RIMBP3CA6NJZ7 1639 aa31.13■■■□□ 2.57
KHSRP-206ENST00000595258 RIMBP3BA6NNM3 1639 aa31.13■■■□□ 2.57
KHSRP-206ENST00000595258 RIMBP3Q9UFD9 1639 aa31.13■■■□□ 2.57
KHSRP-206ENST00000595258 ARHGEF11O15085 1522 aa30.96■■■□□ 2.55
KHSRP-206ENST00000595258 ZNF608Q9ULD9 1512 aaPredicted RBP30.93■■■□□ 2.54
KHSRP-206ENST00000595258 RSF1Q96T23 1441 aaPredicted RBP30.86■■■□□ 2.53
KHSRP-206ENST00000595258 TOP2AP11388 1531 aaKnown RBP30.86■■■□□ 2.53
KHSRP-206ENST00000595258 IFT140Q96RY7 1462 aa30.82■■■□□ 2.52
KHSRP-206ENST00000595258 CYB5RLQ6IPT4 315 aa30.75■■■□□ 2.51
KHSRP-206ENST00000595258 PRDM2Q13029 1718 aa30.74■■■□□ 2.51
KHSRP-206ENST00000595258 TOPBP1Q92547 1522 aa30.68■■■□□ 2.5
KHSRP-206ENST00000595258 EIF4G3O43432 1585 aaKnown RBP30.64■■■□□ 2.5
KHSRP-206ENST00000595258 ARAP1Q96P48 1450 aa30.63■■■□□ 2.49
KHSRP-206ENST00000595258 TRHP20396 242 aaPredicted RBP30.57■■■□□ 2.48
KHSRP-206ENST00000595258 CCDC88BA6NC98 1476 aa30.57■■■□□ 2.48
KHSRP-206ENST00000595258 CHD1O14646 1710 aa30.56■■■□□ 2.48
KHSRP-206ENST00000595258 AQRO60306 1485 aaKnown RBP eCLIP30.53■■■□□ 2.488e-8■■■■■ 29.1
KHSRP-206ENST00000595258 TARBP1Q13395 1621 aaKnown RBP30.49■■■□□ 2.47
KHSRP-206ENST00000595258 ABCC8Q09428 1581 aa30.48■■■□□ 2.47
KHSRP-206ENST00000595258 DNMBPQ6XZF7 1577 aa30.45■■■□□ 2.47
KHSRP-206ENST00000595258 FBLN2P98095 1184 aa30.36■■■□□ 2.45
KHSRP-206ENST00000595258 POLA1P09884 1462 aaPredicted RBP30.32■■■□□ 2.44
KHSRP-206ENST00000595258 RAD54L2Q9Y4B4 1467 aa30.25■■■□□ 2.43
KHSRP-206ENST00000595258 CLASP1Q7Z460 1538 aa30.24■■■□□ 2.43
KHSRP-206ENST00000595258 TDRD9Q8NDG6 1382 aaKnown RBP30.21■■■□□ 2.43
KHSRP-206ENST00000595258 AEBP2Q6ZN18 517 aaPredicted RBP30.17■■■□□ 2.42
KHSRP-206ENST00000595258 SNAPC4Q5SXM2 1469 aa30.15■■■□□ 2.42
KHSRP-206ENST00000595258 SOGA1O94964 1423 aa30.13■■■□□ 2.41
KHSRP-206ENST00000595258 SYNJ1O43426 1573 aa30.05■■■□□ 2.4
KHSRP-206ENST00000595258 CHMP7Q8WUX9 453 aaPredicted RBP30.04■■■□□ 2.4
KHSRP-206ENST00000595258 WDR97A6NE52 1622 aa30.03■■■□□ 2.4
KHSRP-206ENST00000595258 MAGI1Q96QZ7 1491 aaPredicted RBP30.02■■■□□ 2.4
KHSRP-206ENST00000595258 FGD5Q6ZNL6 1462 aa30■■■□□ 2.39
KHSRP-206ENST00000595258 SYNJ2O15056 1496 aa29.95■■■□□ 2.39
KHSRP-206ENST00000595258 GRIN2BQ13224 1484 aa29.94■■■□□ 2.38
KHSRP-206ENST00000595258 GAPVD1Q14C86 1478 aa29.93■■■□□ 2.38
KHSRP-206ENST00000595258 CUX1P39880 1505 aa29.9■■■□□ 2.38
KHSRP-206ENST00000595258 ERCC6L2Q5T890 1561 aa29.76■■■□□ 2.35
KHSRP-206ENST00000595258 PBRM1Q86U86 1689 aa29.76■■■□□ 2.35
KHSRP-206ENST00000595258 ABCA5Q8WWZ7 1642 aa29.65■■■□□ 2.34
KHSRP-206ENST00000595258 ABCA10Q8WWZ4 1543 aa29.63■■■□□ 2.33
KHSRP-206ENST00000595258 GRIN2AQ12879 1464 aa29.58■■■□□ 2.33
KHSRP-206ENST00000595258 CEP170Q5SW79 1584 aa29.58■■■□□ 2.33
KHSRP-206ENST00000595258 NUP160Q12769 1436 aa29.55■■■□□ 2.32
KHSRP-206ENST00000595258 KIF13AQ9H1H9 1805 aa29.52■■■□□ 2.32
KHSRP-206ENST00000595258 SHROOM2Q13796 1616 aa29.5■■■□□ 2.31
KHSRP-206ENST00000595258 ADAMTS12P58397 1594 aa29.47■■■□□ 2.31
KHSRP-206ENST00000595258 FHAD1B1AJZ9 1412 aa29.35■■■□□ 2.29
KHSRP-206ENST00000595258 WRNQ14191 1432 aaPredicted RBP eCLIP29.32■■■□□ 2.28
KHSRP-206ENST00000595258 PRG4Q92954 1404 aaPredicted RBP29.28■■■□□ 2.28
KHSRP-206ENST00000595258 ABCC10Q5T3U5 1492 aa29.26■■■□□ 2.27
KHSRP-206ENST00000595258 KDM4FA0A1W2PPD8 638 aa29.24■■■□□ 2.27
KHSRP-206ENST00000595258 FAM69CQ0P6D2 419 aa29.23■■■□□ 2.27
KHSRP-206ENST00000595258 JPH4Q96JJ6 628 aa29.22■■■□□ 2.27
KHSRP-206ENST00000595258 ERICH3Q5RHP9 1530 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 265 ms