Protein–RNA interactions for Protein: P62829

RPL23, 60S ribosomal protein L23, humanhuman

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL23P62829 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RPL23P62829 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RPL23P62829 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL23P62829 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL23P62829 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL23P62829 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL23P62829 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.18□□□□□ -0.3
RPL23P62829 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RPL23P62829 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RPL23P62829 AC010491.1-201ENST00000563101 2797 ntBASIC13.18□□□□□ -0.3
RPL23P62829 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL23P62829 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL23P62829 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RPL23P62829 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RPL23P62829 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL23P62829 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RPL23P62829 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
RPL23P62829 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC13.18□□□□□ -0.3
RPL23P62829 PPP1R14BP2-201ENST00000426284 444 ntBASIC13.18□□□□□ -0.3
RPL23P62829 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RPL23P62829 KSR1P1-201ENST00000446298 240 ntBASIC13.18□□□□□ -0.3
RPL23P62829 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC13.18□□□□□ -0.3
RPL23P62829 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC13.18□□□□□ -0.3
RPL23P62829 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.18□□□□□ -0.3
RPL23P62829 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL23P62829 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.18□□□□□ -0.3
RPL23P62829 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.18□□□□□ -0.3
RPL23P62829 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RPL23P62829 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL23P62829 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RPL23P62829 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL23P62829 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL23P62829 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL23P62829 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
RPL23P62829 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RPL23P62829 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL23P62829 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.18□□□□□ -0.3
RPL23P62829 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL23P62829 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.18□□□□□ -0.3
RPL23P62829 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL23P62829 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL23P62829 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.18□□□□□ -0.3
RPL23P62829 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RPL23P62829 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RPL23P62829 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL23P62829 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13.18□□□□□ -0.3
RPL23P62829 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.18□□□□□ -0.3
RPL23P62829 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.18□□□□□ -0.3
RPL23P62829 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL23P62829 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.18□□□□□ -0.3
RPL23P62829 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RPL23P62829 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RPL23P62829 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RPL23P62829 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RPL23P62829 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RPL23P62829 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RPL23P62829 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RPL23P62829 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RPL23P62829 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
RPL23P62829 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RPL23P62829 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.17□□□□□ -0.3
RPL23P62829 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RPL23P62829 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.17□□□□□ -0.3
RPL23P62829 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
RPL23P62829 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RPL23P62829 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RPL23P62829 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC13.17□□□□□ -0.3
RPL23P62829 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RPL23P62829 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RPL23P62829 ZNRF2P3-201ENST00000424200 374 ntBASIC13.17□□□□□ -0.3
RPL23P62829 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RPL23P62829 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
RPL23P62829 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC13.17□□□□□ -0.3
RPL23P62829 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC13.17□□□□□ -0.3
RPL23P62829 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC13.17□□□□□ -0.3
RPL23P62829 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC13.17□□□□□ -0.3
RPL23P62829 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC13.17□□□□□ -0.3
RPL23P62829 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC13.17□□□□□ -0.3
RPL23P62829 AL031985.4-201ENST00000642138 673 ntBASIC13.17□□□□□ -0.3
RPL23P62829 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RPL23P62829 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.17□□□□□ -0.3
RPL23P62829 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.17□□□□□ -0.3
RPL23P62829 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RPL23P62829 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RPL23P62829 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC13.17□□□□□ -0.3
RPL23P62829 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.17□□□□□ -0.3
RPL23P62829 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RPL23P62829 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RPL23P62829 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RPL23P62829 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RPL23P62829 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.17□□□□□ -0.3
RPL23P62829 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RPL23P62829 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RPL23P62829 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RPL23P62829 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RPL23P62829 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC13.16□□□□□ -0.3
RPL23P62829 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RPL23P62829 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
RPL23P62829 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RPL23P62829 AL596087.1-201ENST00000400979 1969 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms