Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GAPDHP04406 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GAPDHP04406 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GAPDHP04406 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GAPDHP04406 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.39□□□□□ -0.11
GAPDHP04406 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GAPDHP04406 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.39□□□□□ -0.11
GAPDHP04406 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GAPDHP04406 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GAPDHP04406 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GAPDHP04406 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GAPDHP04406 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
GAPDHP04406 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GAPDHP04406 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
GAPDHP04406 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.39□□□□□ -0.11
GAPDHP04406 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
GAPDHP04406 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
GAPDHP04406 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
GAPDHP04406 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
GAPDHP04406 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
GAPDHP04406 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.38□□□□□ -0.11
GAPDHP04406 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
GAPDHP04406 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.38□□□□□ -0.11
GAPDHP04406 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.38□□□□□ -0.11
GAPDHP04406 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.38□□□□□ -0.11
GAPDHP04406 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.38□□□□□ -0.11
GAPDHP04406 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.38□□□□□ -0.11
GAPDHP04406 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
GAPDHP04406 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.38□□□□□ -0.11
GAPDHP04406 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.38□□□□□ -0.11
GAPDHP04406 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
GAPDHP04406 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.38□□□□□ -0.11
GAPDHP04406 Z69720.1-201ENST00000601483 472 ntBASIC14.38□□□□□ -0.11
GAPDHP04406 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.38□□□□□ -0.11
GAPDHP04406 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAPDHP04406 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
GAPDHP04406 FER1L4-210ENST00000615531 5998 ntBASIC14.38□□□□□ -0.11
GAPDHP04406 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.38□□□□□ -0.11
GAPDHP04406 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
GAPDHP04406 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.38□□□□□ -0.11
GAPDHP04406 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GAPDHP04406 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.37□□□□□ -0.11
GAPDHP04406 AC005915.1-201ENST00000624912 2018 ntBASIC14.37□□□□□ -0.11
GAPDHP04406 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.37□□□□□ -0.11
GAPDHP04406 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.37□□□□□ -0.11
GAPDHP04406 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
GAPDHP04406 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.37□□□□□ -0.11
GAPDHP04406 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.37□□□□□ -0.11
GAPDHP04406 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
GAPDHP04406 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
GAPDHP04406 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GAPDHP04406 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GAPDHP04406 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GAPDHP04406 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GAPDHP04406 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
GAPDHP04406 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GAPDHP04406 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GAPDHP04406 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
GAPDHP04406 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GAPDHP04406 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
GAPDHP04406 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
GAPDHP04406 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GAPDHP04406 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GAPDHP04406 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
GAPDHP04406 DRAXINP1-201ENST00000437611 948 ntBASIC14.37□□□□□ -0.11
GAPDHP04406 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.37□□□□□ -0.11
GAPDHP04406 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.37□□□□□ -0.11
GAPDHP04406 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.37□□□□□ -0.11
GAPDHP04406 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.37□□□□□ -0.11
GAPDHP04406 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms