Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VGLL1Q99990 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
VGLL1Q99990 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
VGLL1Q99990 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VGLL1Q99990 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VGLL1Q99990 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VGLL1Q99990 HBZP1-201ENST00000354915 429 ntBASIC13.06□□□□□ -0.32
VGLL1Q99990 MYCLP1-201ENST00000372451 1075 ntBASIC13.06□□□□□ -0.32
VGLL1Q99990 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.06□□□□□ -0.32
VGLL1Q99990 AC117947.1-201ENST00000427448 529 ntBASIC13.06□□□□□ -0.32
VGLL1Q99990 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.06□□□□□ -0.32
VGLL1Q99990 AL137013.1-201ENST00000432946 1228 ntBASIC13.06□□□□□ -0.32
VGLL1Q99990 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC13.06□□□□□ -0.32
VGLL1Q99990 KRT18P38-201ENST00000449496 1282 ntBASIC13.06□□□□□ -0.32
VGLL1Q99990 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VGLL1Q99990 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.06□□□□□ -0.32
VGLL1Q99990 IGHV3-52-201ENST00000519770 353 ntBASIC13.06□□□□□ -0.32
VGLL1Q99990 VENTXP5-201ENST00000523979 775 ntBASIC13.06□□□□□ -0.32
VGLL1Q99990 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.06□□□□□ -0.32
VGLL1Q99990 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
VGLL1Q99990 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.06□□□□□ -0.32
VGLL1Q99990 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.06□□□□□ -0.32
VGLL1Q99990 AC109462.3-201ENST00000573934 613 ntBASIC13.06□□□□□ -0.32
VGLL1Q99990 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC13.06□□□□□ -0.32
VGLL1Q99990 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.06□□□□□ -0.32
VGLL1Q99990 AL390719.2-201ENST00000606993 987 ntBASIC13.06□□□□□ -0.32
VGLL1Q99990 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VGLL1Q99990 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VGLL1Q99990 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
VGLL1Q99990 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
VGLL1Q99990 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.06□□□□□ -0.32
VGLL1Q99990 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
VGLL1Q99990 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC13.06□□□□□ -0.32
VGLL1Q99990 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VGLL1Q99990 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.06□□□□□ -0.32
VGLL1Q99990 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.06□□□□□ -0.32
VGLL1Q99990 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.06□□□□□ -0.32
VGLL1Q99990 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VGLL1Q99990 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VGLL1Q99990 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VGLL1Q99990 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.06□□□□□ -0.32
VGLL1Q99990 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VGLL1Q99990 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VGLL1Q99990 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.06□□□□□ -0.32
VGLL1Q99990 Z83836.1-201ENST00000624605 1642 ntBASIC13.06□□□□□ -0.32
VGLL1Q99990 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VGLL1Q99990 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
VGLL1Q99990 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VGLL1Q99990 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
VGLL1Q99990 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VGLL1Q99990 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VGLL1Q99990 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
VGLL1Q99990 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VGLL1Q99990 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VGLL1Q99990 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VGLL1Q99990 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VGLL1Q99990 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VGLL1Q99990 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VGLL1Q99990 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VGLL1Q99990 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VGLL1Q99990 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VGLL1Q99990 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
VGLL1Q99990 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.05□□□□□ -0.32
VGLL1Q99990 AC092171.3-201ENST00000610122 2651 ntBASIC13.05□□□□□ -0.32
VGLL1Q99990 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VGLL1Q99990 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VGLL1Q99990 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VGLL1Q99990 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VGLL1Q99990 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VGLL1Q99990 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VGLL1Q99990 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.05□□□□□ -0.32
VGLL1Q99990 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
VGLL1Q99990 RNF126P1-202ENST00000569893 925 ntBASIC13.05□□□□□ -0.32
VGLL1Q99990 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC13.05□□□□□ -0.32
VGLL1Q99990 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.05□□□□□ -0.32
VGLL1Q99990 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
VGLL1Q99990 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VGLL1Q99990 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VGLL1Q99990 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
VGLL1Q99990 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC13.05□□□□□ -0.32
VGLL1Q99990 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.05□□□□□ -0.32
VGLL1Q99990 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
VGLL1Q99990 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.05□□□□□ -0.32
VGLL1Q99990 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
VGLL1Q99990 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VGLL1Q99990 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VGLL1Q99990 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.05□□□□□ -0.32
VGLL1Q99990 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VGLL1Q99990 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
VGLL1Q99990 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.05□□□□□ -0.32
VGLL1Q99990 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VGLL1Q99990 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VGLL1Q99990 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VGLL1Q99990 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
VGLL1Q99990 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VGLL1Q99990 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VGLL1Q99990 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.04□□□□□ -0.32
VGLL1Q99990 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.04□□□□□ -0.32
VGLL1Q99990 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
VGLL1Q99990 AL603756.1-201ENST00000606511 2163 ntBASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms