Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 TUBB8P12-201ENST00000308911 1335 ntBASIC19.96■□□□□ 0.79
CDK5RAP2Q96SN8 TUBB7P-202ENST00000428444 1305 ntBASIC19.96■□□□□ 0.79
CDK5RAP2Q96SN8 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDK5RAP2Q96SN8 TUBB8P7-204ENST00000567960 1332 ntBASIC19.96■□□□□ 0.79
CDK5RAP2Q96SN8 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDK5RAP2Q96SN8 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDK5RAP2Q96SN8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CDK5RAP2Q96SN8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDK5RAP2Q96SN8 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDK5RAP2Q96SN8 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDK5RAP2Q96SN8 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
CDK5RAP2Q96SN8 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDK5RAP2Q96SN8 SPDYE14P-201ENST00000442619 822 ntBASIC19.96■□□□□ 0.79
CDK5RAP2Q96SN8 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
CDK5RAP2Q96SN8 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.96■□□□□ 0.79
CDK5RAP2Q96SN8 AC051619.7-201ENST00000568314 623 ntBASIC19.96■□□□□ 0.79
CDK5RAP2Q96SN8 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CDK5RAP2Q96SN8 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.96■□□□□ 0.79
CDK5RAP2Q96SN8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDK5RAP2Q96SN8 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDK5RAP2Q96SN8 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.96■□□□□ 0.79
CDK5RAP2Q96SN8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CDK5RAP2Q96SN8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDK5RAP2Q96SN8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDK5RAP2Q96SN8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
CDK5RAP2Q96SN8 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDK5RAP2Q96SN8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDK5RAP2Q96SN8 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDK5RAP2Q96SN8 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
CDK5RAP2Q96SN8 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.95■□□□□ 0.78
CDK5RAP2Q96SN8 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDK5RAP2Q96SN8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.95■□□□□ 0.78
CDK5RAP2Q96SN8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDK5RAP2Q96SN8 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDK5RAP2Q96SN8 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.95■□□□□ 0.78
CDK5RAP2Q96SN8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDK5RAP2Q96SN8 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.95■□□□□ 0.78
CDK5RAP2Q96SN8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
CDK5RAP2Q96SN8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDK5RAP2Q96SN8 AC092068.3-201ENST00000587894 2016 ntBASIC19.95■□□□□ 0.78
CDK5RAP2Q96SN8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDK5RAP2Q96SN8 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 AC004835.2-201ENST00000603762 682 ntBASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 SNX33P1-201ENST00000592116 1762 ntBASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 AP000842.3-202ENST00000569238 1080 ntBASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.94■□□□□ 0.78
CDK5RAP2Q96SN8 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDK5RAP2Q96SN8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.93■□□□□ 0.78
CDK5RAP2Q96SN8 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDK5RAP2Q96SN8 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDK5RAP2Q96SN8 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDK5RAP2Q96SN8 TOP3BP1-201ENST00000420768 1380 ntBASIC19.93■□□□□ 0.78
CDK5RAP2Q96SN8 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDK5RAP2Q96SN8 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.93■□□□□ 0.78
CDK5RAP2Q96SN8 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDK5RAP2Q96SN8 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDK5RAP2Q96SN8 AC092474.2-201ENST00000424288 719 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms