Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
SVIPQ8NHG7 AC073476.3-201ENST00000563949 2507 ntBASIC10.62□□□□□ -0.71
SVIPQ8NHG7 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC10.62□□□□□ -0.71
SVIPQ8NHG7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SVIPQ8NHG7 CD99L2-203ENST00000370377 3604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
SVIPQ8NHG7 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SVIPQ8NHG7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
SVIPQ8NHG7 FAM13A-213ENST00000509094 2762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
SVIPQ8NHG7 REXO1L5P-201ENST00000622260 2098 ntBASIC10.62□□□□□ -0.71
SVIPQ8NHG7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
SVIPQ8NHG7 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
SVIPQ8NHG7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SVIPQ8NHG7 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC10.62□□□□□ -0.71
SVIPQ8NHG7 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC10.62□□□□□ -0.71
SVIPQ8NHG7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
SVIPQ8NHG7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SVIPQ8NHG7 AC116050.2-201ENST00000612102 1779 ntBASIC10.62□□□□□ -0.71
SVIPQ8NHG7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC10.62□□□□□ -0.71
SVIPQ8NHG7 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SVIPQ8NHG7 TSFM-204ENST00000454289 2192 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
SVIPQ8NHG7 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SVIPQ8NHG7 KCNQ3-204ENST00000521134 2577 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
SVIPQ8NHG7 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
SVIPQ8NHG7 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SVIPQ8NHG7 LINC00330-201ENST00000414562 2036 ntTSL 2 BASIC10.62□□□□□ -0.71
SVIPQ8NHG7 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC10.62□□□□□ -0.71
SVIPQ8NHG7 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
SVIPQ8NHG7 AC022596.2-201ENST00000635352 3078 ntBASIC10.61□□□□□ -0.71
SVIPQ8NHG7 SON-203ENST00000381679 7860 ntTSL 5 BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 VOPP1-208ENST00000433959 2900 ntTSL 2 BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 AC019294.4-201ENST00000561777 2905 ntBASIC10.61□□□□□ -0.71
SVIPQ8NHG7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 LINC00342-202ENST00000448494 2351 ntTSL 2 BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 NFXL1-206ENST00000507489 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 FGF14-AS2-201ENST00000606448 1074 ntBASIC10.61□□□□□ -0.71
SVIPQ8NHG7 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 AC079465.1-201ENST00000416046 3361 ntTSL 2 BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 PCBP1-AS1-227ENST00000435880 2386 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 ZHX1-206ENST00000522655 3357 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 AC022929.2-201ENST00000612997 2127 ntBASIC10.61□□□□□ -0.71
SVIPQ8NHG7 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 AC008026.3-201ENST00000583426 1707 ntTSL 2 BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 PIGO-201ENST00000298004 2588 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 OLFML2B-203ENST00000367940 2685 ntAPPRIS ALT1 TSL 2 BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
SVIPQ8NHG7 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
SVIPQ8NHG7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SVIPQ8NHG7 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SVIPQ8NHG7 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SVIPQ8NHG7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
SVIPQ8NHG7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
SVIPQ8NHG7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SVIPQ8NHG7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC10.6□□□□□ -0.71
SVIPQ8NHG7 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
SVIPQ8NHG7 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
SVIPQ8NHG7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC10.6□□□□□ -0.71
SVIPQ8NHG7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC10.6□□□□□ -0.71
SVIPQ8NHG7 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SVIPQ8NHG7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SVIPQ8NHG7 PHACTR3-205ENST00000395636 2372 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SVIPQ8NHG7 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms