RNA–Protein interactions for RNA: ENST00000397821.7

SH3KBP1-205, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3KBP1, Length 4,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-205ENST00000397821 DCAF8L2P0C7V8 631 aa24.19■■□□□ 1.46
SH3KBP1-205ENST00000397821 NISCHQ9Y2I1 1504 aa24.13■■□□□ 1.45
SH3KBP1-205ENST00000397821 SUPT5HO00267 1087 aaKnown RBP23.8■■□□□ 1.4
SH3KBP1-205ENST00000397821 SHROOM4Q9ULL8 1493 aa23.23■■□□□ 1.31
SH3KBP1-205ENST00000397821 EHMT2Q96KQ7 1210 aa22.95■■□□□ 1.26
SH3KBP1-205ENST00000397821 PCGF6Q9BYE7 350 aa22.94■■□□□ 1.26
SH3KBP1-205ENST00000397821 PELP1Q8IZL8 1130 aaKnown RBP22.82■■□□□ 1.24
SH3KBP1-205ENST00000397821 FAM9AQ8IZU1 332 aaPredicted RBP22.43■■□□□ 1.18
SH3KBP1-205ENST00000397821 CENPBP07199 599 aaPredicted RBP22.4■■□□□ 1.18
SH3KBP1-205ENST00000397821 ZEB1P37275 1124 aaPredicted RBP22.33■■□□□ 1.17
SH3KBP1-205ENST00000397821 TTBK1Q5TCY1 1321 aaPredicted RBP22.28■■□□□ 1.16
SH3KBP1-205ENST00000397821 APLP2Q06481 763 aa22.2■■□□□ 1.14
SH3KBP1-205ENST00000397821 MYT1Q01538 1121 aa22.15■■□□□ 1.14
SH3KBP1-205ENST00000397821 CCER1Q8TC90 406 aaPredicted RBP22.14■■□□□ 1.14
SH3KBP1-205ENST00000397821 HRCP23327 699 aa22.12■■□□□ 1.13
SH3KBP1-205ENST00000397821 ERICH6Q7L0X2 663 aa21.94■■□□□ 1.1
SH3KBP1-205ENST00000397821 YTHDC1Q96MU7 727 aaKnown RBP21.93■■□□□ 1.1
SH3KBP1-205ENST00000397821 TRIM41Q8WV44 630 aa21.91■■□□□ 1.1
SH3KBP1-205ENST00000397821 TRIM26Q12899 539 aaPredicted RBP21.8■■□□□ 1.08
SH3KBP1-205ENST00000397821 PPARGC1BQ86YN6 1023 aaKnown RBP21.77■■□□□ 1.08
SH3KBP1-205ENST00000397821 RANGAP1P46060 587 aaPredicted RBP21.67■■□□□ 1.06
SH3KBP1-205ENST00000397821 NEFLP07196 543 aa21.6■■□□□ 1.05
SH3KBP1-205ENST00000397821 LOC105371045A0A1W2PR82 267 aa21.55■■□□□ 1.04
SH3KBP1-205ENST00000397821 UBTFP17480 764 aaKnown RBP21.53■■□□□ 1.04
SH3KBP1-205ENST00000397821 CHIC1Q5VXU3 224 aa21.51■■□□□ 1.03
SH3KBP1-205ENST00000397821 ATP1B4Q9UN42 357 aaPredicted RBP21.26■□□□□ 0.99
SH3KBP1-205ENST00000397821 DIEXFQ68CQ4 756 aaKnown RBP21.21■□□□□ 0.99
SH3KBP1-205ENST00000397821 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.18■□□□□ 0.98
SH3KBP1-205ENST00000397821 GTF3C3Q9Y5Q9 886 aa21.11■□□□□ 0.97
SH3KBP1-205ENST00000397821 HNRNPUL2Q1KMD3 747 aaKnown RBP21.09■□□□□ 0.97
SH3KBP1-205ENST00000397821 ITGAEP38570 1179 aa20.97■□□□□ 0.95
SH3KBP1-205ENST00000397821 ACIN1Q9UKV3 1341 aaKnown RBP20.83■□□□□ 0.93
SH3KBP1-205ENST00000397821 DAXXQ9UER7 740 aaPredicted RBP20.8■□□□□ 0.92
SH3KBP1-205ENST00000397821 BCANQ96GW7 911 aa20.75■□□□□ 0.91
SH3KBP1-205ENST00000397821 POLR3GLQ9BT43 218 aa20.72■□□□□ 0.91
SH3KBP1-205ENST00000397821 CNGB1Q14028 1251 aaPredicted RBP20.7■□□□□ 0.9
SH3KBP1-205ENST00000397821 RTL5Q5HYW3 569 aaPredicted RBP20.69■□□□□ 0.9
SH3KBP1-205ENST00000397821 ZNF316A6NFI3 1004 aaPredicted RBP20.62■□□□□ 0.89
SH3KBP1-205ENST00000397821 SCAF1Q9H7N4 1312 aaKnown RBP20.46■□□□□ 0.87
SH3KBP1-205ENST00000397821 NEUROD1Q13562 356 aa20.44■□□□□ 0.86
SH3KBP1-205ENST00000397821 CDK11AQ9UQ88 783 aaPredicted RBP20.42■□□□□ 0.86
SH3KBP1-205ENST00000397821 ANP32CO43423 234 aa20.34■□□□□ 0.85
SH3KBP1-205ENST00000397821 FAM50AQ14320 339 aaKnown RBP20.32■□□□□ 0.84
SH3KBP1-205ENST00000397821 CLSPNQ9HAW4 1339 aa20.31■□□□□ 0.84
SH3KBP1-205ENST00000397821 DCAF1Q9Y4B6 1507 aa20.22■□□□□ 0.83
SH3KBP1-205ENST00000397821 ABCC9O60706 1549 aa20.2■□□□□ 0.82
SH3KBP1-205ENST00000397821 FKBP8Q14318 412 aa20.18■□□□□ 0.82
SH3KBP1-205ENST00000397821 TRIM52Q96A61 297 aa20.13■□□□□ 0.81
SH3KBP1-205ENST00000397821 ZCCHC6Q5VYS8 1495 aaKnown RBP20.11■□□□□ 0.81
SH3KBP1-205ENST00000397821 CCDC180Q9P1Z9 1646 aa20.08■□□□□ 0.81
SH3KBP1-205ENST00000397821 ANP32AP39687 249 aaKnown RBP20.05■□□□□ 0.8
SH3KBP1-205ENST00000397821 MYT1LQ9UL68 1186 aa20.01■□□□□ 0.79
SH3KBP1-205ENST00000397821 MIER1Q8N108 512 aa20■□□□□ 0.79
SH3KBP1-205ENST00000397821 CSRNP3Q8WYN3 585 aa19.99■□□□□ 0.79
SH3KBP1-205ENST00000397821 ZNF326Q5BKZ1 582 aaKnown RBP19.98■□□□□ 0.79
SH3KBP1-205ENST00000397821 SLC4A1APQ9BWU0 796 aaKnown RBP19.98■□□□□ 0.79
SH3KBP1-205ENST00000397821 EIF5BO60841 1220 aaKnown RBP19.97■□□□□ 0.79
SH3KBP1-205ENST00000397821 NPM2Q86SE8 214 aaKnown RBP19.96■□□□□ 0.79
SH3KBP1-205ENST00000397821 DDX10Q13206 875 aaKnown RBP19.93■□□□□ 0.78
SH3KBP1-205ENST00000397821 HNRNPUQ00839 825 aaKnown RBP eCLIP19.9■□□□□ 0.78
SH3KBP1-205ENST00000397821 MYO15BQ96JP2 1530 aa19.86■□□□□ 0.77
SH3KBP1-205ENST00000397821 NBR1Q14596 966 aa19.83■□□□□ 0.77
SH3KBP1-205ENST00000397821 PABPN1Q86U42 306 aaKnown RBP eCLIP19.78■□□□□ 0.76
SH3KBP1-205ENST00000397821 ANP32EQ9BTT0 268 aa19.76■□□□□ 0.75
SH3KBP1-205ENST00000397821 FAM9BQ8IZU0 186 aa19.74■□□□□ 0.75
SH3KBP1-205ENST00000397821 P3H3Q8IVL6 736 aa19.72■□□□□ 0.75
SH3KBP1-205ENST00000397821 IRX6P78412 446 aaPredicted RBP19.71■□□□□ 0.75
SH3KBP1-205ENST00000397821 ZBTB47Q9UFB7 747 aaPredicted RBP19.71■□□□□ 0.75
SH3KBP1-205ENST00000397821 CANXP27824 592 aaKnown RBP19.7■□□□□ 0.74
SH3KBP1-205ENST00000397821 TONSLQ96HA7 1378 aa19.67■□□□□ 0.74
SH3KBP1-205ENST00000397821 CCDC136Q96JN2 1154 aa19.67■□□□□ 0.74
SH3KBP1-205ENST00000397821 BCL11AQ9H165 835 aa19.64■□□□□ 0.73
SH3KBP1-205ENST00000397821 SCRIBQ14160 1630 aa19.64■□□□□ 0.73
SH3KBP1-205ENST00000397821 HIRIP3Q9BW71 556 aaPredicted RBP19.6■□□□□ 0.73
SH3KBP1-205ENST00000397821 SALL2Q9Y467 1007 aaPredicted RBP19.58■□□□□ 0.72
SH3KBP1-205ENST00000397821 ARID3CA6NKF2 412 aa19.53■□□□□ 0.72
SH3KBP1-205ENST00000397821 MRS2Q9HD23 443 aa19.53■□□□□ 0.72
SH3KBP1-205ENST00000397821 GLIPR1L2Q4G1C9 344 aa19.52■□□□□ 0.71
SH3KBP1-205ENST00000397821 SUPT16HQ9Y5B9 1047 aaKnown RBP19.49■□□□□ 0.71
SH3KBP1-205ENST00000397821 TMC1Q8TDI8 760 aa19.46■□□□□ 0.71
SH3KBP1-205ENST00000397821 ARXQ96QS3 562 aa19.46■□□□□ 0.71
SH3KBP1-205ENST00000397821 ANP32BQ92688 251 aaKnown RBP19.44■□□□□ 0.7
SH3KBP1-205ENST00000397821 UPF2Q9HAU5 1272 aaKnown RBP19.43■□□□□ 0.7
SH3KBP1-205ENST00000397821 HSP90AA1P07900 732 aaKnown RBP19.41■□□□□ 0.7
SH3KBP1-205ENST00000397821 ZNF777Q9ULD5 760 aaPredicted RBP19.37■□□□□ 0.69
SH3KBP1-205ENST00000397821 CHIC2Q9UKJ5 165 aa19.33■□□□□ 0.69
SH3KBP1-205ENST00000397821 CLIP1P30622 1438 aa19.32■□□□□ 0.68
SH3KBP1-205ENST00000397821 NEFMP07197 916 aa19.31■□□□□ 0.68
SH3KBP1-205ENST00000397821 CEP162Q5TB80 1403 aa19.3■□□□□ 0.68
SH3KBP1-205ENST00000397821 RTN4Q9NQC3 1192 aaKnown RBP19.29■□□□□ 0.68
SH3KBP1-205ENST00000397821 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.28■□□□□ 0.68
SH3KBP1-205ENST00000397821 EIF4G2P78344 907 aaKnown RBP eCLIP19.27■□□□□ 0.68
SH3KBP1-205ENST00000397821 SENP3-EIF4A1A0A087X0R7 540 aa19.26■□□□□ 0.67
SH3KBP1-205ENST00000397821 RB1CC1Q8TDY2 1594 aa19.26■□□□□ 0.67
SH3KBP1-205ENST00000397821 NACADO15069 1562 aa19.26■□□□□ 0.67
SH3KBP1-205ENST00000397821 FBLN2P98095 1184 aa19.25■□□□□ 0.67
SH3KBP1-205ENST00000397821 RBM19Q9Y4C8 960 aaKnown RBP19.23■□□□□ 0.67
SH3KBP1-205ENST00000397821 SLC24A1O60721 1099 aa19.22■□□□□ 0.67
SH3KBP1-205ENST00000397821 PPP4R2Q9NY27 417 aa19.21■□□□□ 0.67
SH3KBP1-205ENST00000397821 RSF1Q96T23 1441 aaPredicted RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms