RNA–Protein interactions for RNA: ENST00000521134.6

KCNQ3-204, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene KCNQ3, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-204ENST00000521134 NISCHQ9Y2I1 1504 aa21.64■■□□□ 1.05
KCNQ3-204ENST00000521134 CCDC180Q9P1Z9 1646 aa18.83■□□□□ 0.61
KCNQ3-204ENST00000521134 ZCCHC6Q5VYS8 1495 aaKnown RBP18.21■□□□□ 0.51
KCNQ3-204ENST00000521134 DCAF1Q9Y4B6 1507 aa17.97■□□□□ 0.47
KCNQ3-204ENST00000521134 PELP1Q8IZL8 1130 aaKnown RBP17.81■□□□□ 0.44
KCNQ3-204ENST00000521134 MYO15BQ96JP2 1530 aa17.73■□□□□ 0.43
KCNQ3-204ENST00000521134 DCAF8L2P0C7V8 631 aa17.67■□□□□ 0.42
KCNQ3-204ENST00000521134 SHROOM4Q9ULL8 1493 aa17.59■□□□□ 0.41
KCNQ3-204ENST00000521134 HRCP23327 699 aa17.56■□□□□ 0.4
KCNQ3-204ENST00000521134 ABCC9O60706 1549 aa17.54■□□□□ 0.4
KCNQ3-204ENST00000521134 NACADO15069 1562 aa17.51■□□□□ 0.39
KCNQ3-204ENST00000521134 MYT1Q01538 1121 aa17.35■□□□□ 0.37
KCNQ3-204ENST00000521134 RB1CC1Q8TDY2 1594 aa17.3■□□□□ 0.36
KCNQ3-204ENST00000521134 SUPT5HO00267 1087 aaKnown RBP17.3■□□□□ 0.36
KCNQ3-204ENST00000521134 SCRIBQ14160 1630 aa17.22■□□□□ 0.35
KCNQ3-204ENST00000521134 PPARGC1BQ86YN6 1023 aaKnown RBP17.14■□□□□ 0.33
KCNQ3-204ENST00000521134 SLC24A1O60721 1099 aa17.06■□□□□ 0.32
KCNQ3-204ENST00000521134 PCGF6Q9BYE7 350 aa17■□□□□ 0.31
KCNQ3-204ENST00000521134 TTBK1Q5TCY1 1321 aaPredicted RBP16.92■□□□□ 0.3
KCNQ3-204ENST00000521134 SCAF1Q9H7N4 1312 aaKnown RBP16.9■□□□□ 0.3
KCNQ3-204ENST00000521134 UNC13AQ9UPW8 1703 aa16.88■□□□□ 0.29
KCNQ3-204ENST00000521134 RSF1Q96T23 1441 aaPredicted RBP16.83■□□□□ 0.28
KCNQ3-204ENST00000521134 CHIC1Q5VXU3 224 aa16.8■□□□□ 0.28
KCNQ3-204ENST00000521134 BICRAQ9NZM4 1560 aa16.74■□□□□ 0.27
KCNQ3-204ENST00000521134 CECR2Q9BXF3 1484 aa16.74■□□□□ 0.27
KCNQ3-204ENST00000521134 BAZ1AQ9NRL2 1556 aaPredicted RBP16.7■□□□□ 0.26
KCNQ3-204ENST00000521134 MROH2BQ7Z745 1585 aa16.67■□□□□ 0.26
KCNQ3-204ENST00000521134 LOC105371045A0A1W2PR82 267 aa16.61■□□□□ 0.25
KCNQ3-204ENST00000521134 PRKCSHP14314 528 aaPredicted RBP16.61■□□□□ 0.25
KCNQ3-204ENST00000521134 SMARCA4P51532 1647 aa16.58■□□□□ 0.24
KCNQ3-204ENST00000521134 PABPN1Q86U42 306 aaKnown RBP eCLIP16.55■□□□□ 0.24
KCNQ3-204ENST00000521134 WIZO95785 1651 aa16.52■□□□□ 0.24
KCNQ3-204ENST00000521134 PEG3Q9GZU2 1588 aa16.44■□□□□ 0.22
KCNQ3-204ENST00000521134 TOP2AP11388 1531 aaKnown RBP16.43■□□□□ 0.22
KCNQ3-204ENST00000521134 APLP2Q06481 763 aa16.37■□□□□ 0.21
KCNQ3-204ENST00000521134 ZEB1P37275 1124 aaPredicted RBP16.34■□□□□ 0.21
KCNQ3-204ENST00000521134 ACIN1Q9UKV3 1341 aaKnown RBP16.34■□□□□ 0.21
KCNQ3-204ENST00000521134 ERICH6Q7L0X2 663 aa16.31■□□□□ 0.2
KCNQ3-204ENST00000521134 SMARCA2P51531 1590 aa16.31■□□□□ 0.2
KCNQ3-204ENST00000521134 ATAD2BQ9ULI0 1458 aa16.28■□□□□ 0.2
KCNQ3-204ENST00000521134 TRIM26Q12899 539 aaPredicted RBP16.26■□□□□ 0.19
KCNQ3-204ENST00000521134 NEUROD1Q13562 356 aa16.25■□□□□ 0.19
KCNQ3-204ENST00000521134 CCDC88BA6NC98 1476 aa16.24■□□□□ 0.19
KCNQ3-204ENST00000521134 GTF3C3Q9Y5Q9 886 aa16.23■□□□□ 0.19
KCNQ3-204ENST00000521134 EIF4G1Q04637 1599 aaKnown RBP16.21■□□□□ 0.19
KCNQ3-204ENST00000521134 EHMT2Q96KQ7 1210 aa16.2■□□□□ 0.18
KCNQ3-204ENST00000521134 BAZ1BQ9UIG0 1483 aaKnown RBP16.18■□□□□ 0.18
KCNQ3-204ENST00000521134 NCAPD3P42695 1498 aa16.16■□□□□ 0.18
KCNQ3-204ENST00000521134 HMGXB3Q12766 1538 aa16.14■□□□□ 0.17
KCNQ3-204ENST00000521134 DAXXQ9UER7 740 aaPredicted RBP16.09■□□□□ 0.17
KCNQ3-204ENST00000521134 CENPBP07199 599 aaPredicted RBP16.08■□□□□ 0.17
KCNQ3-204ENST00000521134 TRIM41Q8WV44 630 aa16.08■□□□□ 0.16
KCNQ3-204ENST00000521134 FAM9AQ8IZU1 332 aaPredicted RBP16.07■□□□□ 0.16
KCNQ3-204ENST00000521134 BCL11AQ9H165 835 aa16.05■□□□□ 0.16
KCNQ3-204ENST00000521134 CC2D2AQ9P2K1 1620 aa15.92■□□□□ 0.14
KCNQ3-204ENST00000521134 ABCC8Q09428 1581 aa15.87■□□□□ 0.13
KCNQ3-204ENST00000521134 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.82■□□□□ 0.12
KCNQ3-204ENST00000521134 WRNQ14191 1432 aaPredicted RBP eCLIP15.82■□□□□ 0.12
KCNQ3-204ENST00000521134 CFTRP13569 1480 aa15.82■□□□□ 0.12
KCNQ3-204ENST00000521134 DIEXFQ68CQ4 756 aaKnown RBP15.77■□□□□ 0.12
KCNQ3-204ENST00000521134 EEA1Q15075 1411 aa15.76■□□□□ 0.11
KCNQ3-204ENST00000521134 PRDM2Q13029 1718 aa15.73■□□□□ 0.11
KCNQ3-204ENST00000521134 ANP32EQ9BTT0 268 aa15.73■□□□□ 0.11
KCNQ3-204ENST00000521134 CADPSQ9ULU8 1353 aa15.73■□□□□ 0.11
KCNQ3-204ENST00000521134 SYNJ1O43426 1573 aa15.72■□□□□ 0.11
KCNQ3-204ENST00000521134 TOP2BQ02880 1626 aa15.7■□□□□ 0.1
KCNQ3-204ENST00000521134 BIVM-ERCC5R4GMW8 1640 aa15.69■□□□□ 0.1
KCNQ3-204ENST00000521134 CCER1Q8TC90 406 aaPredicted RBP15.67■□□□□ 0.1
KCNQ3-204ENST00000521134 SOGA1O94964 1423 aa15.63■□□□□ 0.09
KCNQ3-204ENST00000521134 CSRNP3Q8WYN3 585 aa15.59■□□□□ 0.09
KCNQ3-204ENST00000521134 CUX1P39880 1505 aa15.59■□□□□ 0.09
KCNQ3-204ENST00000521134 LAMC3Q9Y6N6 1575 aa15.56■□□□□ 0.08
KCNQ3-204ENST00000521134 YTHDC1Q96MU7 727 aaKnown RBP15.56■□□□□ 0.08
KCNQ3-204ENST00000521134 RUSC2Q8N2Y8 1516 aa15.54■□□□□ 0.08
KCNQ3-204ENST00000521134 FANCD2Q9BXW9 1451 aa15.52■□□□□ 0.08
KCNQ3-204ENST00000521134 KIF21BO75037 1637 aa15.5■□□□□ 0.07
KCNQ3-204ENST00000521134 TNIKQ9UKE5 1360 aa15.49■□□□□ 0.07
KCNQ3-204ENST00000521134 GOLGA3Q08378 1498 aa15.49■□□□□ 0.07
KCNQ3-204ENST00000521134 CEP164Q9UPV0 1460 aa15.48■□□□□ 0.07
KCNQ3-204ENST00000521134 AEBP2Q6ZN18 517 aaPredicted RBP15.46■□□□□ 0.07
KCNQ3-204ENST00000521134 NESP48681 1621 aa15.44■□□□□ 0.06
KCNQ3-204ENST00000521134 PDS5BQ9NTI5 1447 aa15.44■□□□□ 0.06
KCNQ3-204ENST00000521134 DNMBPQ6XZF7 1577 aa15.44■□□□□ 0.06
KCNQ3-204ENST00000521134 KIF27Q86VH2 1401 aa15.44■□□□□ 0.06
KCNQ3-204ENST00000521134 TSHZ2Q9NRE2 1034 aa15.39■□□□□ 0.05
KCNQ3-204ENST00000521134 FGD5Q6ZNL6 1462 aa15.39■□□□□ 0.05
KCNQ3-204ENST00000521134 EIF5BO60841 1220 aaKnown RBP15.39■□□□□ 0.05
KCNQ3-204ENST00000521134 ERICH3Q5RHP9 1530 aa15.39■□□□□ 0.05
KCNQ3-204ENST00000521134 DNAJC5BQ9UF47 199 aa15.38■□□□□ 0.05
KCNQ3-204ENST00000521134 TOPBP1Q92547 1522 aa15.38■□□□□ 0.05
KCNQ3-204ENST00000521134 PRXQ9BXM0 1461 aa15.38■□□□□ 0.05
KCNQ3-204ENST00000521134 CEP162Q5TB80 1403 aa15.36■□□□□ 0.05
KCNQ3-204ENST00000521134 ZNF316A6NFI3 1004 aaPredicted RBP15.34■□□□□ 0.05
KCNQ3-204ENST00000521134 UBTFP17480 764 aaKnown RBP15.34■□□□□ 0.05
KCNQ3-204ENST00000521134 RAPGEF2Q9Y4G8 1499 aa15.32■□□□□ 0.04
KCNQ3-204ENST00000521134 SUPT16HQ9Y5B9 1047 aaKnown RBP15.31■□□□□ 0.04
KCNQ3-204ENST00000521134 CUX2O14529 1486 aa15.31■□□□□ 0.04
KCNQ3-204ENST00000521134 URB2Q14146 1524 aaKnown RBP15.31■□□□□ 0.04
KCNQ3-204ENST00000521134 ABCA10Q8WWZ4 1543 aa15.31■□□□□ 0.04
KCNQ3-204ENST00000521134 CLSPNQ9HAW4 1339 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms