RNA–Protein interactions for RNA: ENST00000454289.7

TSFM-204, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSFM, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-204ENST00000454289 NISCHQ9Y2I1 1504 aa29.21■■■□□ 2.27
TSFM-204ENST00000454289 CCDC180Q9P1Z9 1646 aa25.34■■□□□ 1.65
TSFM-204ENST00000454289 ZCCHC6Q5VYS8 1495 aaKnown RBP24.58■■□□□ 1.53
TSFM-204ENST00000454289 DCAF1Q9Y4B6 1507 aa24.1■■□□□ 1.45
TSFM-204ENST00000454289 DCAF8L2P0C7V8 631 aa24.09■■□□□ 1.45
TSFM-204ENST00000454289 SHROOM4Q9ULL8 1493 aa24.05■■□□□ 1.44
TSFM-204ENST00000454289 ABCC9O60706 1549 aa23.85■■□□□ 1.41
TSFM-204ENST00000454289 MYO15BQ96JP2 1530 aa23.72■■□□□ 1.39
TSFM-204ENST00000454289 NACADO15069 1562 aa23.54■■□□□ 1.36
TSFM-204ENST00000454289 SCRIBQ14160 1630 aa23.41■■□□□ 1.34
TSFM-204ENST00000454289 RB1CC1Q8TDY2 1594 aa23.3■■□□□ 1.32
TSFM-204ENST00000454289 SUPT5HO00267 1087 aaKnown RBP23.22■■□□□ 1.31
TSFM-204ENST00000454289 UNC13AQ9UPW8 1703 aa22.92■■□□□ 1.26
TSFM-204ENST00000454289 RSF1Q96T23 1441 aaPredicted RBP22.76■■□□□ 1.23
TSFM-204ENST00000454289 CECR2Q9BXF3 1484 aa22.73■■□□□ 1.23
TSFM-204ENST00000454289 BICRAQ9NZM4 1560 aa22.66■■□□□ 1.22
TSFM-204ENST00000454289 MROH2BQ7Z745 1585 aa22.61■■□□□ 1.21
TSFM-204ENST00000454289 PABPN1Q86U42 306 aaKnown RBP eCLIP22.55■■□□□ 1.2
TSFM-204ENST00000454289 BAZ1AQ9NRL2 1556 aaPredicted RBP22.51■■□□□ 1.19
TSFM-204ENST00000454289 WIZO95785 1651 aa22.44■■□□□ 1.18
TSFM-204ENST00000454289 SMARCA4P51532 1647 aa22.42■■□□□ 1.18
TSFM-204ENST00000454289 CHIC1Q5VXU3 224 aa22.33■■□□□ 1.16
TSFM-204ENST00000454289 TOP2AP11388 1531 aaKnown RBP22.17■■□□□ 1.14
TSFM-204ENST00000454289 PEG3Q9GZU2 1588 aa22.1■■□□□ 1.13
TSFM-204ENST00000454289 SMARCA2P51531 1590 aa22■■□□□ 1.11
TSFM-204ENST00000454289 ATAD2BQ9ULI0 1458 aa22■■□□□ 1.11
TSFM-204ENST00000454289 CCDC88BA6NC98 1476 aa21.98■■□□□ 1.11
TSFM-204ENST00000454289 EIF4G1Q04637 1599 aaKnown RBP21.93■■□□□ 1.1
TSFM-204ENST00000454289 BAZ1BQ9UIG0 1483 aaKnown RBP21.87■■□□□ 1.09
TSFM-204ENST00000454289 TRIM41Q8WV44 630 aa21.77■■□□□ 1.08
TSFM-204ENST00000454289 NCAPD3P42695 1498 aa21.74■■□□□ 1.07
TSFM-204ENST00000454289 HMGXB3Q12766 1538 aa21.73■■□□□ 1.07
TSFM-204ENST00000454289 ABCC8Q09428 1581 aa21.61■■□□□ 1.05
TSFM-204ENST00000454289 CC2D2AQ9P2K1 1620 aa21.57■■□□□ 1.04
TSFM-204ENST00000454289 LOC105371045A0A1W2PR82 267 aa21.51■■□□□ 1.03
TSFM-204ENST00000454289 FAM9AQ8IZU1 332 aaPredicted RBP21.44■■□□□ 1.02
TSFM-204ENST00000454289 WRNQ14191 1432 aaPredicted RBP eCLIP21.39■■□□□ 1.02
TSFM-204ENST00000454289 SYNJ1O43426 1573 aa21.34■■□□□ 1.01
TSFM-204ENST00000454289 CFTRP13569 1480 aa21.33■■□□□ 1
TSFM-204ENST00000454289 SOGA1O94964 1423 aa21.24■□□□□ 0.99
TSFM-204ENST00000454289 PRDM2Q13029 1718 aa21.24■□□□□ 0.99
TSFM-204ENST00000454289 CADPSQ9ULU8 1353 aa21.21■□□□□ 0.99
TSFM-204ENST00000454289 TOP2BQ02880 1626 aa21.2■□□□□ 0.98
TSFM-204ENST00000454289 BIVM-ERCC5R4GMW8 1640 aa21.18■□□□□ 0.98
TSFM-204ENST00000454289 RUSC2Q8N2Y8 1516 aa21.17■□□□□ 0.98
TSFM-204ENST00000454289 EHMT2Q96KQ7 1210 aa21.17■□□□□ 0.98
TSFM-204ENST00000454289 EEA1Q15075 1411 aa21.15■□□□□ 0.98
TSFM-204ENST00000454289 CUX1P39880 1505 aa21.12■□□□□ 0.97
TSFM-204ENST00000454289 CSRNP3Q8WYN3 585 aa21.06■□□□□ 0.96
TSFM-204ENST00000454289 DNAJC5BQ9UF47 199 aa21.04■□□□□ 0.96
TSFM-204ENST00000454289 NESP48681 1621 aa21.02■□□□□ 0.96
TSFM-204ENST00000454289 FANCD2Q9BXW9 1451 aa20.99■□□□□ 0.95
TSFM-204ENST00000454289 LAMC3Q9Y6N6 1575 aa20.96■□□□□ 0.95
TSFM-204ENST00000454289 GOLGA3Q08378 1498 aa20.91■□□□□ 0.94
TSFM-204ENST00000454289 KIF21BO75037 1637 aa20.91■□□□□ 0.94
TSFM-204ENST00000454289 CEP164Q9UPV0 1460 aa20.89■□□□□ 0.93
TSFM-204ENST00000454289 TNIKQ9UKE5 1360 aa20.88■□□□□ 0.93
TSFM-204ENST00000454289 FGD5Q6ZNL6 1462 aa20.85■□□□□ 0.93
TSFM-204ENST00000454289 DNMBPQ6XZF7 1577 aa20.84■□□□□ 0.93
TSFM-204ENST00000454289 KIF27Q86VH2 1401 aa20.82■□□□□ 0.92
TSFM-204ENST00000454289 UBTFP17480 764 aaKnown RBP20.82■□□□□ 0.92
TSFM-204ENST00000454289 CEP162Q5TB80 1403 aa20.81■□□□□ 0.92
TSFM-204ENST00000454289 TOPBP1Q92547 1522 aa20.8■□□□□ 0.92
TSFM-204ENST00000454289 RAPGEF2Q9Y4G8 1499 aa20.79■□□□□ 0.92
TSFM-204ENST00000454289 PDS5BQ9NTI5 1447 aa20.79■□□□□ 0.92
TSFM-204ENST00000454289 PRXQ9BXM0 1461 aa20.76■□□□□ 0.91
TSFM-204ENST00000454289 KIF21AQ7Z4S6 1674 aa20.75■□□□□ 0.91
TSFM-204ENST00000454289 CUX2O14529 1486 aa20.75■□□□□ 0.91
TSFM-204ENST00000454289 URB2Q14146 1524 aaKnown RBP20.75■□□□□ 0.91
TSFM-204ENST00000454289 PCGF6Q9BYE7 350 aa20.72■□□□□ 0.91
TSFM-204ENST00000454289 ERICH3Q5RHP9 1530 aa20.72■□□□□ 0.91
TSFM-204ENST00000454289 POLA1P09884 1462 aaPredicted RBP20.71■□□□□ 0.91
TSFM-204ENST00000454289 RAD54L2Q9Y4B4 1467 aa20.68■□□□□ 0.9
TSFM-204ENST00000454289 ABCA10Q8WWZ4 1543 aa20.65■□□□□ 0.9
TSFM-204ENST00000454289 IGF1RP08069 1367 aa20.64■□□□□ 0.89
TSFM-204ENST00000454289 TRIM26Q12899 539 aaPredicted RBP20.62■□□□□ 0.89
TSFM-204ENST00000454289 CLIP1P30622 1438 aa20.6■□□□□ 0.89
TSFM-204ENST00000454289 WDR97A6NE52 1622 aa20.58■□□□□ 0.89
TSFM-204ENST00000454289 MRC2Q9UBG0 1479 aa20.54■□□□□ 0.88
TSFM-204ENST00000454289 CARMIL1Q5VZK9 1371 aa20.53■□□□□ 0.88
TSFM-204ENST00000454289 PPARGC1BQ86YN6 1023 aaKnown RBP20.51■□□□□ 0.87
TSFM-204ENST00000454289 ABCA5Q8WWZ7 1642 aa20.48■□□□□ 0.87
TSFM-204ENST00000454289 RANGAP1P46060 587 aaPredicted RBP20.48■□□□□ 0.87
TSFM-204ENST00000454289 TARBP1Q13395 1621 aaKnown RBP20.47■□□□□ 0.87
TSFM-204ENST00000454289 TDRD9Q8NDG6 1382 aaKnown RBP20.44■□□□□ 0.86
TSFM-204ENST00000454289 CUL7Q14999 1698 aa20.44■□□□□ 0.86
TSFM-204ENST00000454289 VPS8Q8N3P4 1428 aa20.43■□□□□ 0.86
TSFM-204ENST00000454289 WDR62O43379 1518 aa20.42■□□□□ 0.86
TSFM-204ENST00000454289 GAPVD1Q14C86 1478 aa20.41■□□□□ 0.86
TSFM-204ENST00000454289 ARAP1Q96P48 1450 aa20.4■□□□□ 0.86
TSFM-204ENST00000454289 ERCC6Q03468 1493 aa20.39■□□□□ 0.85
TSFM-204ENST00000454289 ARHGAP35Q9NRY4 1499 aa20.34■□□□□ 0.85
TSFM-204ENST00000454289 THOC2Q8NI27 1593 aaKnown RBP20.34■□□□□ 0.85
TSFM-204ENST00000454289 IFT140Q96RY7 1462 aa20.31■□□□□ 0.84
TSFM-204ENST00000454289 TTBK1Q5TCY1 1321 aaPredicted RBP20.31■□□□□ 0.84
TSFM-204ENST00000454289 PBRM1Q86U86 1689 aa20.3■□□□□ 0.84
TSFM-204ENST00000454289 AQRO60306 1485 aaKnown RBP eCLIP20.28■□□□□ 0.841e-6■■■■■ 37.7
TSFM-204ENST00000454289 HRCP23327 699 aa20.28■□□□□ 0.84
TSFM-204ENST00000454289 CTTNBP2Q8WZ74 1663 aa20.26■□□□□ 0.83
TSFM-204ENST00000454289 ZNF608Q9ULD9 1512 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms