RNA–Protein interactions for RNA: ENST00000395636.6

PHACTR3-205, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 1 (best) BASIC

Gene PHACTR3, Length 2,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-205ENST00000395636 NISCHQ9Y2I1 1504 aa26.03■■□□□ 1.76
PHACTR3-205ENST00000395636 CCDC180Q9P1Z9 1646 aa22.57■■□□□ 1.2
PHACTR3-205ENST00000395636 ZCCHC6Q5VYS8 1495 aaKnown RBP21.85■■□□□ 1.09
PHACTR3-205ENST00000395636 DCAF8L2P0C7V8 631 aa21.74■■□□□ 1.07
PHACTR3-205ENST00000395636 ABCC9O60706 1549 aa21.6■■□□□ 1.05
PHACTR3-205ENST00000395636 SHROOM4Q9ULL8 1493 aa21.52■■□□□ 1.04
PHACTR3-205ENST00000395636 DCAF1Q9Y4B6 1507 aa21.37■■□□□ 1.01
PHACTR3-205ENST00000395636 MYO15BQ96JP2 1530 aa21.07■□□□□ 0.96
PHACTR3-205ENST00000395636 NACADO15069 1562 aa21.03■□□□□ 0.96
PHACTR3-205ENST00000395636 SCRIBQ14160 1630 aa20.98■□□□□ 0.95
PHACTR3-205ENST00000395636 RB1CC1Q8TDY2 1594 aa20.88■□□□□ 0.93
PHACTR3-205ENST00000395636 SUPT5HO00267 1087 aaKnown RBP20.67■□□□□ 0.9
PHACTR3-205ENST00000395636 UNC13AQ9UPW8 1703 aa20.63■□□□□ 0.89
PHACTR3-205ENST00000395636 PABPN1Q86U42 306 aaKnown RBP eCLIP20.46■□□□□ 0.87
PHACTR3-205ENST00000395636 BICRAQ9NZM4 1560 aa20.39■□□□□ 0.85
PHACTR3-205ENST00000395636 CECR2Q9BXF3 1484 aa20.37■□□□□ 0.85
PHACTR3-205ENST00000395636 RSF1Q96T23 1441 aaPredicted RBP20.26■□□□□ 0.83
PHACTR3-205ENST00000395636 MROH2BQ7Z745 1585 aa20.21■□□□□ 0.83
PHACTR3-205ENST00000395636 PELP1Q8IZL8 1130 aaKnown RBP20.09■□□□□ 0.81
PHACTR3-205ENST00000395636 WIZO95785 1651 aa20.06■□□□□ 0.8
PHACTR3-205ENST00000395636 BAZ1AQ9NRL2 1556 aaPredicted RBP20.04■□□□□ 0.8
PHACTR3-205ENST00000395636 SMARCA4P51532 1647 aa20.02■□□□□ 0.8
PHACTR3-205ENST00000395636 EIF4G1Q04637 1599 aaKnown RBP19.73■□□□□ 0.75
PHACTR3-205ENST00000395636 HRCP23327 699 aa19.72■□□□□ 0.75
PHACTR3-205ENST00000395636 CHIC1Q5VXU3 224 aa19.72■□□□□ 0.75
PHACTR3-205ENST00000395636 TOP2AP11388 1531 aaKnown RBP19.71■□□□□ 0.75
PHACTR3-205ENST00000395636 ATAD2BQ9ULI0 1458 aa19.7■□□□□ 0.74
PHACTR3-205ENST00000395636 PEG3Q9GZU2 1588 aa19.68■□□□□ 0.74
PHACTR3-205ENST00000395636 CCDC88BA6NC98 1476 aa19.61■□□□□ 0.73
PHACTR3-205ENST00000395636 SMARCA2P51531 1590 aa19.6■□□□□ 0.73
PHACTR3-205ENST00000395636 MYT1Q01538 1121 aa19.59■□□□□ 0.73
PHACTR3-205ENST00000395636 BAZ1BQ9UIG0 1483 aaKnown RBP19.57■□□□□ 0.72
PHACTR3-205ENST00000395636 CC2D2AQ9P2K1 1620 aa19.48■□□□□ 0.71
PHACTR3-205ENST00000395636 NCAPD3P42695 1498 aa19.46■□□□□ 0.71
PHACTR3-205ENST00000395636 HMGXB3Q12766 1538 aa19.4■□□□□ 0.7
PHACTR3-205ENST00000395636 TRIM41Q8WV44 630 aa19.31■□□□□ 0.68
PHACTR3-205ENST00000395636 ABCC8Q09428 1581 aa19.29■□□□□ 0.68
PHACTR3-205ENST00000395636 DNAJC5BQ9UF47 199 aa19.27■□□□□ 0.67
PHACTR3-205ENST00000395636 FAM9AQ8IZU1 332 aaPredicted RBP19.13■□□□□ 0.65
PHACTR3-205ENST00000395636 LOC105371045A0A1W2PR82 267 aa19.09■□□□□ 0.65
PHACTR3-205ENST00000395636 CFTRP13569 1480 aa19.07■□□□□ 0.64
PHACTR3-205ENST00000395636 WRNQ14191 1432 aaPredicted RBP eCLIP19.03■□□□□ 0.64
PHACTR3-205ENST00000395636 SYNJ1O43426 1573 aa19.03■□□□□ 0.64
PHACTR3-205ENST00000395636 PPARGC1BQ86YN6 1023 aaKnown RBP19.02■□□□□ 0.64
PHACTR3-205ENST00000395636 CADPSQ9ULU8 1353 aa19.01■□□□□ 0.63
PHACTR3-205ENST00000395636 NESP48681 1621 aa19.01■□□□□ 0.63
PHACTR3-205ENST00000395636 EHMT2Q96KQ7 1210 aa18.99■□□□□ 0.63
PHACTR3-205ENST00000395636 SOGA1O94964 1423 aa18.92■□□□□ 0.62
PHACTR3-205ENST00000395636 PCGF6Q9BYE7 350 aa18.92■□□□□ 0.62
PHACTR3-205ENST00000395636 PRDM2Q13029 1718 aa18.91■□□□□ 0.62
PHACTR3-205ENST00000395636 RUSC2Q8N2Y8 1516 aa18.9■□□□□ 0.62
PHACTR3-205ENST00000395636 CUX1P39880 1505 aa18.87■□□□□ 0.61
PHACTR3-205ENST00000395636 TOP2BQ02880 1626 aa18.85■□□□□ 0.61
PHACTR3-205ENST00000395636 SCAF1Q9H7N4 1312 aaKnown RBP18.83■□□□□ 0.61
PHACTR3-205ENST00000395636 FANCD2Q9BXW9 1451 aa18.83■□□□□ 0.6
PHACTR3-205ENST00000395636 BIVM-ERCC5R4GMW8 1640 aa18.8■□□□□ 0.6
PHACTR3-205ENST00000395636 LAMC3Q9Y6N6 1575 aa18.77■□□□□ 0.6
PHACTR3-205ENST00000395636 KIF21AQ7Z4S6 1674 aa18.7■□□□□ 0.58
PHACTR3-205ENST00000395636 CSRNP3Q8WYN3 585 aa18.68■□□□□ 0.58
PHACTR3-205ENST00000395636 CEP164Q9UPV0 1460 aa18.67■□□□□ 0.58
PHACTR3-205ENST00000395636 PDS5BQ9NTI5 1447 aa18.65■□□□□ 0.58
PHACTR3-205ENST00000395636 FGD5Q6ZNL6 1462 aa18.65■□□□□ 0.58
PHACTR3-205ENST00000395636 TRIM26Q12899 539 aaPredicted RBP18.64■□□□□ 0.58
PHACTR3-205ENST00000395636 URB2Q14146 1524 aaKnown RBP18.64■□□□□ 0.57
PHACTR3-205ENST00000395636 TOPBP1Q92547 1522 aa18.63■□□□□ 0.57
PHACTR3-205ENST00000395636 EEA1Q15075 1411 aa18.61■□□□□ 0.57
PHACTR3-205ENST00000395636 DNMBPQ6XZF7 1577 aa18.6■□□□□ 0.57
PHACTR3-205ENST00000395636 RAD54L2Q9Y4B4 1467 aa18.58■□□□□ 0.56
PHACTR3-205ENST00000395636 TTBK1Q5TCY1 1321 aaPredicted RBP18.57■□□□□ 0.56
PHACTR3-205ENST00000395636 POLA1P09884 1462 aaPredicted RBP18.56■□□□□ 0.56
PHACTR3-205ENST00000395636 ZEB1P37275 1124 aaPredicted RBP18.55■□□□□ 0.56
PHACTR3-205ENST00000395636 CUX2O14529 1486 aa18.53■□□□□ 0.56
PHACTR3-205ENST00000395636 UBTFP17480 764 aaKnown RBP18.51■□□□□ 0.55
PHACTR3-205ENST00000395636 KIF27Q86VH2 1401 aa18.5■□□□□ 0.55
PHACTR3-205ENST00000395636 RAPGEF2Q9Y4G8 1499 aa18.5■□□□□ 0.55
PHACTR3-205ENST00000395636 GOLGA3Q08378 1498 aa18.46■□□□□ 0.55
PHACTR3-205ENST00000395636 KIF21BO75037 1637 aa18.46■□□□□ 0.55
PHACTR3-205ENST00000395636 MRC2Q9UBG0 1479 aa18.43■□□□□ 0.54
PHACTR3-205ENST00000395636 ERCC6Q03468 1493 aa18.43■□□□□ 0.54
PHACTR3-205ENST00000395636 IGF1RP08069 1367 aa18.42■□□□□ 0.54
PHACTR3-205ENST00000395636 PRXQ9BXM0 1461 aa18.41■□□□□ 0.54
PHACTR3-205ENST00000395636 TNIKQ9UKE5 1360 aa18.41■□□□□ 0.54
PHACTR3-205ENST00000395636 ABCA10Q8WWZ4 1543 aa18.41■□□□□ 0.54
PHACTR3-205ENST00000395636 TDRD9Q8NDG6 1382 aaKnown RBP18.4■□□□□ 0.54
PHACTR3-205ENST00000395636 RANGAP1P46060 587 aaPredicted RBP18.4■□□□□ 0.54
PHACTR3-205ENST00000395636 CEP162Q5TB80 1403 aa18.39■□□□□ 0.53
PHACTR3-205ENST00000395636 WDR97A6NE52 1622 aa18.37■□□□□ 0.53
PHACTR3-205ENST00000395636 TARBP1Q13395 1621 aaKnown RBP18.35■□□□□ 0.53
PHACTR3-205ENST00000395636 ACIN1Q9UKV3 1341 aaKnown RBP18.33■□□□□ 0.53
PHACTR3-205ENST00000395636 WDR62O43379 1518 aa18.33■□□□□ 0.52
PHACTR3-205ENST00000395636 THOC2Q8NI27 1593 aaKnown RBP18.32■□□□□ 0.52
PHACTR3-205ENST00000395636 CARMIL1Q5VZK9 1371 aa18.3■□□□□ 0.52
PHACTR3-205ENST00000395636 ERICH3Q5RHP9 1530 aa18.3■□□□□ 0.52
PHACTR3-205ENST00000395636 ABCA5Q8WWZ7 1642 aa18.28■□□□□ 0.52
PHACTR3-205ENST00000395636 AQRO60306 1485 aaKnown RBP eCLIP18.27■□□□□ 0.52
PHACTR3-205ENST00000395636 GAPVD1Q14C86 1478 aa18.27■□□□□ 0.51
PHACTR3-205ENST00000395636 ZNF608Q9ULD9 1512 aaPredicted RBP18.26■□□□□ 0.51
PHACTR3-205ENST00000395636 CLIP1P30622 1438 aa18.22■□□□□ 0.51
PHACTR3-205ENST00000395636 IFT140Q96RY7 1462 aa18.18■□□□□ 0.5
PHACTR3-205ENST00000395636 PBRM1Q86U86 1689 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms