Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP11P24347 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.31■□□□□ 0.2
MMP11P24347 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MMP11P24347 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MMP11P24347 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP11P24347 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP11P24347 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP11P24347 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP11P24347 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.31■□□□□ 0.2
MMP11P24347 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MMP11P24347 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.31■□□□□ 0.2
MMP11P24347 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP11P24347 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP11P24347 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP11P24347 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MMP11P24347 AC005104.2-201ENST00000427818 678 ntBASIC16.31■□□□□ 0.2
MMP11P24347 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.31■□□□□ 0.2
MMP11P24347 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP11P24347 AC108751.1-201ENST00000490852 363 ntBASIC16.31■□□□□ 0.2
MMP11P24347 RNA5SP416-201ENST00000516838 111 ntBASIC16.31■□□□□ 0.2
MMP11P24347 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
MMP11P24347 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.31■□□□□ 0.2
MMP11P24347 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.31■□□□□ 0.2
MMP11P24347 AL139424.1-201ENST00000607572 797 ntBASIC16.31■□□□□ 0.2
MMP11P24347 AC139530.3-201ENST00000620344 690 ntBASIC16.31■□□□□ 0.2
MMP11P24347 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
MMP11P24347 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP11P24347 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP11P24347 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP11P24347 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.31■□□□□ 0.2
MMP11P24347 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP11P24347 REXO1L11P-201ENST00000620964 1927 ntBASIC16.31■□□□□ 0.2
MMP11P24347 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
MMP11P24347 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.31■□□□□ 0.2
MMP11P24347 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MMP11P24347 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.31■□□□□ 0.2
MMP11P24347 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
MMP11P24347 NKILA-202ENST00000614771 2598 ntBASIC16.31■□□□□ 0.2
MMP11P24347 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP11P24347 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.3■□□□□ 0.2
MMP11P24347 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.3■□□□□ 0.2
MMP11P24347 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.3■□□□□ 0.2
MMP11P24347 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP11P24347 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
MMP11P24347 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP11P24347 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.3■□□□□ 0.2
MMP11P24347 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP11P24347 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP11P24347 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
MMP11P24347 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP11P24347 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
MMP11P24347 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP11P24347 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP11P24347 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.3■□□□□ 0.2
MMP11P24347 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.3■□□□□ 0.2
MMP11P24347 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.3■□□□□ 0.2
MMP11P24347 ELK2BP-201ENST00000415014 1224 ntBASIC16.3■□□□□ 0.2
MMP11P24347 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.3■□□□□ 0.2
MMP11P24347 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP11P24347 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP11P24347 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.3■□□□□ 0.2
MMP11P24347 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.3■□□□□ 0.2
MMP11P24347 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.3■□□□□ 0.2
MMP11P24347 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP11P24347 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP11P24347 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP11P24347 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.3■□□□□ 0.2
MMP11P24347 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP11P24347 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP11P24347 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.3■□□□□ 0.2
MMP11P24347 AC011676.5-201ENST00000624864 2660 ntBASIC16.3■□□□□ 0.2
MMP11P24347 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.3■□□□□ 0.2
MMP11P24347 AC006504.4-201ENST00000592118 1568 ntBASIC16.3■□□□□ 0.2
MMP11P24347 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP11P24347 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP11P24347 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP11P24347 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MMP11P24347 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP11P24347 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP11P24347 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
MMP11P24347 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MMP11P24347 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP11P24347 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MMP11P24347 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
MMP11P24347 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
MMP11P24347 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
MMP11P24347 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP11P24347 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MMP11P24347 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.29■□□□□ 0.2
MMP11P24347 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.29■□□□□ 0.2
MMP11P24347 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.29■□□□□ 0.2
MMP11P24347 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.29■□□□□ 0.2
MMP11P24347 AC040169.1-201ENST00000565382 521 ntBASIC16.29■□□□□ 0.2
MMP11P24347 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP11P24347 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP11P24347 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP11P24347 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.29■□□□□ 0.2
MMP11P24347 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP11P24347 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MMP11P24347 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms