Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 PSMC6-214ENST00000557240 625 ntTSL 54.9□□□□□ -1.639e-7■■■□□ 15.2
RPS3P23396 RBM22-208ENST00000522469 989 ntTSL 24.74□□□□□ -1.651e-8■■■□□ 15.2
RPS3P23396 PSMC6-210ENST00000555339 583 ntTSL 54.53□□□□□ -1.689e-7■■■□□ 15.2
RPS3P23396 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.724e-7■■■□□ 15.2
RPS3P23396 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.18□□□□□ -1.744e-7■■■□□ 15.2
RPS3P23396 CTPS1-212ENST00000498694 599 ntTSL 33.97□□□□□ -1.774e-7■■■□□ 15.2
RPS3P23396 PDCD6IP-213ENST00000487821 750 ntTSL 43.75□□□□□ -1.814e-18■■■□□ 15.2
RPS3P23396 HMGCR-213ENST00000515776 501 ntTSL 23.73□□□□□ -1.814e-12■■■□□ 15.2
RPS3P23396 RPS4XP22-201ENST00000480755 780 ntBASIC3.29□□□□□ -1.881e-8■■■□□ 15.2
RPS3P23396 PDCD6IP-202ENST00000412887 842 ntTSL 33.08□□□□□ -1.924e-18■■■□□ 15.2
RPS3P23396 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.68□□□□□ -1.987e-13■■■□□ 15.2
RPS3P23396 SUCLG1-208ENST00000491123 1073 ntTSL 31.99□□□□□ -2.094e-7■■■□□ 15.2
RPS3P23396 PTRH2-205ENST00000587935 409 ntTSL 31.2□□□□□ -2.224e-7■■■□□ 15.2
RPS3P23396 MDK-209ENST00000489525 1339 ntTSL 524.12■■□□□ 1.451e-14■■■□□ 15.2
RPS3P23396 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.318e-15■■■□□ 15.2
RPS3P23396 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.21e-14■■■□□ 15.2
RPS3P23396 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.39■■□□□ 1.171e-14■■■□□ 15.2
RPS3P23396 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.22■□□□□ 0.831e-14■■■□□ 15.2
RPS3P23396 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.54■□□□□ 0.721e-14■■■□□ 15.2
RPS3P23396 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.591e-14■■■□□ 15.2
RPS3P23396 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.521e-14■■■□□ 15.2
RPS3P23396 MDK-211ENST00000533283 498 ntTSL 315.31■□□□□ 0.041e-14■■■□□ 15.2
RPS3P23396 RPL27-202ENST00000586277 460 ntTSL 37.56□□□□□ -1.22e-16■■■□□ 15.2
RPS3P23396 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.536e-7■■■□□ 15.2
RPS3P23396 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.316e-7■■■□□ 15.2
RPS3P23396 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.236e-7■■■□□ 15.2
RPS3P23396 SEMA3B-214ENST00000619119 3158 ntTSL 515.4■□□□□ 0.066e-7■■■□□ 15.2
RPS3P23396 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.046e-7■■■□□ 15.2
RPS3P23396 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.334e-9■■■□□ 15.2
RPS3P23396 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.244e-9■■■□□ 15.2
RPS3P23396 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.94e-9■■■□□ 15.2
RPS3P23396 PTOV1-209ENST00000597793 1716 ntTSL 1 (best)19.03■□□□□ 0.647e-9■■■□□ 15.2
RPS3P23396 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.92■□□□□ 0.144e-9■■■□□ 15.2
RPS3P23396 PTOV1-210ENST00000598325 1438 ntTSL 515.28■□□□□ 0.044e-9■■■□□ 15.2
RPS3P23396 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.48□□□□□ -0.094e-9■■■□□ 15.2
RPS3P23396 PTOV1-218ENST00000601612 1480 ntTSL 213.22□□□□□ -0.294e-9■■■□□ 15.2
RPS3P23396 PTOV1-216ENST00000601093 522 ntTSL 211.38□□□□□ -0.597e-9■■■□□ 15.2
RPS3P23396 CAPRIN1-205ENST00000528856 595 ntTSL 522.98■■□□□ 1.274e-7■■■□□ 15.1
RPS3P23396 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.34e-7■■■□□ 15.1
RPS3P23396 CAPRIN1-202ENST00000389645 3498 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.544e-7■■■□□ 15.1
RPS3P23396 CAPRIN1-201ENST00000341394 4108 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.814e-7■■■□□ 15.1
RPS3P23396 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.984e-7■■■□□ 15.1
RPS3P23396 AP2B1-207ENST00000591561 756 ntTSL 35.24□□□□□ -1.573e-6■■■□□ 15.1
RPS3P23396 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.471e-8■■■□□ 15.1
RPS3P23396 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.42■□□□□ 0.381e-8■■■□□ 15.1
RPS3P23396 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.411e-6■■■□□ 15.1
RPS3P23396 PRAME-204ENST00000403441 567 ntAPPRIS ALT2 TSL 311.79□□□□□ -0.525e-44■■■□□ 15.1
RPS3P23396 PRAME-210ENST00000442481 581 ntTSL 311.21□□□□□ -0.615e-44■■■□□ 15.1
RPS3P23396 UQCRH-202ENST00000460947 621 ntTSL 28.62□□□□□ -1.033e-8■■■□□ 15.1
RPS3P23396 MFSD12-205ENST00000585814 1002 ntTSL 315.16■□□□□ 0.023e-7■■■□□ 15.1
RPS3P23396 MFSD12-213ENST00000592652 486 ntTSL 513.52□□□□□ -0.253e-7■■■□□ 15.1
RPS3P23396 CLTC-206ENST00000475458 479 ntTSL 21.81□□□□□ -2.121e-6■■■□□ 15.1
RPS3P23396 PFKL-205ENST00000466134 5986 ntTSL 219.48■□□□□ 0.712e-7■■■□□ 15.1
RPS3P23396 PFKL-207ENST00000474114 6007 ntTSL 1 (best)18.07■□□□□ 0.481e-7■■■□□ 15.1
RPS3P23396 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.312e-7■■■□□ 15.1
RPS3P23396 PFKL-202ENST00000397961 3390 ntTSL 1 (best)14.21□□□□□ -0.132e-7■■■□□ 15.1
RPS3P23396 AHCY-206ENST00000606061 1170 ntTSL 219.46■□□□□ 0.711e-9■■■□□ 15.1
RPS3P23396 SERPINA5-210ENST00000556064 462 ntTSL 411.33□□□□□ -0.67e-72■■■□□ 15.1
RPS3P23396 GNAS-244ENST00000485673 715 ntTSL 527.32■■□□□ 1.965e-46■■■□□ 15.1
RPS3P23396 GNAS-235ENST00000478585 543 ntTSL 225.3■■□□□ 1.645e-46■■■□□ 15.1
RPS3P23396 GNAS-206ENST00000349036 581 ntTSL 512.31□□□□□ -0.445e-46■■■□□ 15.1
RPS3P23396 GNAS-216ENST00000419558 729 ntTSL 310.34□□□□□ -0.755e-46■■■□□ 15.1
RPS3P23396 NOTUM-202ENST00000425009 996 ntTSL 323.5■■□□□ 1.354e-15■■■□□ 15.1
RPS3P23396 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.24■□□□□ 0.352e-87■■■□□ 15.1
RPS3P23396 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.164e-7■■■□□ 15.1
RPS3P23396 PTK7-208ENST00000470019 4016 ntTSL 514.31□□□□□ -0.124e-7■■■□□ 15.1
RPS3P23396 PTK7-201ENST00000230418 3958 ntTSL 1 (best)13.97□□□□□ -0.174e-7■■■□□ 15.1
RPS3P23396 PTK7-215ENST00000487673 5282 ntTSL 213.84□□□□□ -0.194e-7■■■□□ 15.1
RPS3P23396 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.63□□□□□ -0.234e-7■■■□□ 15.1
RPS3P23396 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.51□□□□□ -0.254e-7■■■□□ 15.1
RPS3P23396 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC12.59□□□□□ -0.394e-7■■■□□ 15.1
RPS3P23396 OS9-223ENST00000553208 1022 ntTSL 312.35□□□□□ -0.435e-7■■■□□ 15.1
RPS3P23396 MMS19-204ENST00000415383 3401 ntTSL 1 (best)11.06□□□□□ -0.644e-6■■■□□ 15.1
RPS3P23396 MMS19-201ENST00000327238 3165 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.674e-6■■■□□ 15.1
RPS3P23396 MMS19-203ENST00000370782 3532 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.694e-6■■■□□ 15.1
RPS3P23396 MMS19-209ENST00000438925 3797 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.734e-6■■■□□ 15.1
RPS3P23396 MMS19-202ENST00000355839 3555 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.824e-6■■■□□ 15.1
RPS3P23396 PEG10-208ENST00000615790 6394 ntTSL 1 (best) BASIC9.16□□□□□ -0.944e-21■■■□□ 15.1
RPS3P23396 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.034e-21■■■□□ 15.1
RPS3P23396 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.034e-21■■■□□ 15.1
RPS3P23396 CYP51A1-205ENST00000482924 555 ntTSL 24.78□□□□□ -1.642e-8■■■□□ 15.1
RPS3P23396 STT3A-210ENST00000527606 569 ntTSL 415.14■□□□□ 0.015e-8■■■□□ 15.1
RPS3P23396 MTTP-208ENST00000511045 3154 ntTSL 2 BASIC8.42□□□□□ -1.066e-7■■■□□ 15.1
RPS3P23396 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.456e-7■■■□□ 15.1
RPS3P23396 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.746e-7■■■□□ 15.1
RPS3P23396 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.782e-7■■■□□ 15.1
RPS3P23396 CYP27A1-205ENST00000494263 2566 ntTSL 217.22■□□□□ 0.352e-7■■■□□ 15.1
RPS3P23396 FKBP2-204ENST00000535135 639 ntTSL 323.98■■□□□ 1.433e-7■■■□□ 15.1
RPS3P23396 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.423e-9■■■□□ 15.1
RPS3P23396 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.283e-7■■■□□ 15.1
RPS3P23396 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.89■□□□□ 0.773e-7■■■□□ 15.1
RPS3P23396 ERLIN2-208ENST00000521644 1602 ntTSL 519.72■□□□□ 0.753e-7■■■□□ 15.1
RPS3P23396 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.733e-9■■■□□ 15.1
RPS3P23396 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.94■□□□□ 0.623e-7■■■□□ 15.1
RPS3P23396 FKBP2-205ENST00000536642 637 ntTSL 218.34■□□□□ 0.533e-7■■■□□ 15.1
RPS3P23396 PLCB1-224ENST00000636319 2930 ntTSL 518.11■□□□□ 0.493e-7■■■□□ 15.1
RPS3P23396 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.9■□□□□ 0.463e-7■■■□□ 15.1
RPS3P23396 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.459e-8■■■□□ 15.1
RPS3P23396 PRODH2-202ENST00000587695 1956 ntTSL 217.76■□□□□ 0.433e-7■■■□□ 15.1
RPS3P23396 EMC3-203ENST00000470827 570 ntTSL 417.66■□□□□ 0.423e-7■■■□□ 15.1
Retrieved 100 of 24,271 protein–RNA pairs in 180.8 ms