RNA–Protein interactions for RNA: ENST00000475458.1

CLTC-206, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-206ENST00000475458 CHIC1Q5VXU3 224 aa14.76□□□□□ -0.05
CLTC-206ENST00000475458 AEBP2Q6ZN18 517 aaPredicted RBP14.57□□□□□ -0.08
CLTC-206ENST00000475458 PHF23Q9BUL5 403 aaPredicted RBP13.09□□□□□ -0.31
CLTC-206ENST00000475458 PLPPR3Q6T4P5 718 aa12.21□□□□□ -0.45
CLTC-206ENST00000475458 SENP3Q9H4L4 574 aaPredicted RBP12.19□□□□□ -0.46
CLTC-206ENST00000475458 POTEDQ86YR6 584 aa11.91□□□□□ -0.5
CLTC-206ENST00000475458 ADRA2BP18089 450 aa11.5□□□□□ -0.57
CLTC-206ENST00000475458 PPP6R1Q9UPN7 881 aa11.35□□□□□ -0.59
CLTC-206ENST00000475458 KCNA4P22459 653 aa11.31□□□□□ -0.6
CLTC-206ENST00000475458 FOXD1Q16676 465 aa11.29□□□□□ -0.6
CLTC-206ENST00000475458 EHMT2Q96KQ7 1210 aa11.24□□□□□ -0.61
CLTC-206ENST00000475458 PPP4R3CPQ6ZMV5 832 aa10.87□□□□□ -0.67
CLTC-206ENST00000475458 CSRNP3Q8WYN3 585 aa10.85□□□□□ -0.67
CLTC-206ENST00000475458 SLC4A1APQ9BWU0 796 aaKnown RBP10.85□□□□□ -0.67
CLTC-206ENST00000475458 PIAS4Q8N2W9 510 aaPredicted RBP10.76□□□□□ -0.69
CLTC-206ENST00000475458 NCBP3Q53F19 620 aaKnown RBP10.7□□□□□ -0.7
CLTC-206ENST00000475458 NPM3O75607 178 aaKnown RBP10.61□□□□□ -0.71
CLTC-206ENST00000475458 ZBTB22O15209 634 aa10.45□□□□□ -0.74
CLTC-206ENST00000475458 CNKSR2Q8WXI2 1034 aa10.41□□□□□ -0.74
CLTC-206ENST00000475458 SCAF1Q9H7N4 1312 aaKnown RBP10.31□□□□□ -0.76
CLTC-206ENST00000475458 FOXD4L1Q9NU39 408 aa10.21□□□□□ -0.77
CLTC-206ENST00000475458 DNAJC5BQ9UF47 199 aa10.18□□□□□ -0.78
CLTC-206ENST00000475458 MAPK8IP2Q13387 824 aaPredicted RBP10.15□□□□□ -0.78
CLTC-206ENST00000475458 MSH5O43196 834 aa10.12□□□□□ -0.79
CLTC-206ENST00000475458 RNF216Q9NWF9 866 aaPredicted RBP10.06□□□□□ -0.8
CLTC-206ENST00000475458 RTN4Q9NQC3 1192 aaKnown RBP9.95□□□□□ -0.82
CLTC-206ENST00000475458 SLC24A1O60721 1099 aa9.93□□□□□ -0.82
CLTC-206ENST00000475458 AMER1Q5JTC6 1135 aaPredicted RBP9.9□□□□□ -0.82
CLTC-206ENST00000475458 SLC4A2P04920 1241 aa9.89□□□□□ -0.83
CLTC-206ENST00000475458 HOXD11P31277 338 aaPredicted RBP9.88□□□□□ -0.83
CLTC-206ENST00000475458 DMRT2Q9Y5R5 561 aa9.85□□□□□ -0.83
CLTC-206ENST00000475458 ATXN8OSP0DMR3 200 aa9.78□□□□□ -0.84
CLTC-206ENST00000475458 MYCNP04198 464 aaPredicted RBP9.76□□□□□ -0.85
CLTC-206ENST00000475458 FKBP8Q14318 412 aa9.75□□□□□ -0.85
CLTC-206ENST00000475458 ATF5Q9Y2D1 282 aaPredicted RBP9.52□□□□□ -0.89
CLTC-206ENST00000475458 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.4□□□□□ -0.92e-7■□□□□ 9.8
CLTC-206ENST00000475458 DCAF8L1A6NGE4 600 aa9.38□□□□□ -0.91
CLTC-206ENST00000475458 SAMD1Q6SPF0 538 aaPredicted RBP9.37□□□□□ -0.91
CLTC-206ENST00000475458 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.35□□□□□ -0.91
CLTC-206ENST00000475458 HNRNPUL2Q1KMD3 747 aaKnown RBP9.35□□□□□ -0.91
CLTC-206ENST00000475458 U3KPZ7 1027 aaPredicted RBP9.35□□□□□ -0.91
CLTC-206ENST00000475458 ZNF219Q9P2Y4 722 aaPredicted RBP9.24□□□□□ -0.93
CLTC-206ENST00000475458 CACNB1Q02641 598 aaPredicted RBP9.2□□□□□ -0.94
CLTC-206ENST00000475458 FBXO3Q9UK99 471 aa9.18□□□□□ -0.94
CLTC-206ENST00000475458 SPDYE4A6NLX3 237 aa9.16□□□□□ -0.94
CLTC-206ENST00000475458 PLCB2Q00722 1185 aa9.14□□□□□ -0.95
CLTC-206ENST00000475458 MKRN4PQ13434 485 aaPredicted RBP9.13□□□□□ -0.95
CLTC-206ENST00000475458 PROM2Q8N271 834 aa9.12□□□□□ -0.95
CLTC-206ENST00000475458 APLP2Q06481 763 aa9.1□□□□□ -0.95
CLTC-206ENST00000475458 VASPP50552 380 aaPredicted RBP9.09□□□□□ -0.95
CLTC-206ENST00000475458 POTEHQ6S545 545 aa9.07□□□□□ -0.96
CLTC-206ENST00000475458 IFNLR1Q8IU57 520 aaPredicted RBP9.04□□□□□ -0.96
CLTC-206ENST00000475458 HAP1P54257 671 aaPredicted RBP9.01□□□□□ -0.97
CLTC-206ENST00000475458 FBLN2P98095 1184 aa8.99□□□□□ -0.97
CLTC-206ENST00000475458 DCAF8L2P0C7V8 631 aa8.98□□□□□ -0.97
CLTC-206ENST00000475458 PKD2Q13563 968 aa8.97□□□□□ -0.97
CLTC-206ENST00000475458 TRHP20396 242 aaPredicted RBP8.93□□□□□ -0.98
CLTC-206ENST00000475458 SPINK5Q9NQ38 1064 aaPredicted RBP8.92□□□□□ -0.98
CLTC-206ENST00000475458 POLA2Q14181 598 aa8.91□□□□□ -0.98
CLTC-206ENST00000475458 BCANQ96GW7 911 aa8.88□□□□□ -0.99
CLTC-206ENST00000475458 VSIG10Q8N0Z9 540 aa8.87□□□□□ -0.99
CLTC-206ENST00000475458 PRKCSHP14314 528 aaPredicted RBP8.85□□□□□ -0.99
CLTC-206ENST00000475458 CAPN15O75808 1086 aa8.82□□□□□ -1
CLTC-206ENST00000475458 SPOCK2Q92563 424 aa8.8□□□□□ -1
CLTC-206ENST00000475458 TAOK2Q9UL54 1235 aa8.8□□□□□ -1
CLTC-206ENST00000475458 NPM1P06748 294 aaKnown RBP eCLIP8.79□□□□□ -1
CLTC-206ENST00000475458 KLHL34Q8N239 644 aa8.78□□□□□ -1
CLTC-206ENST00000475458 BBXQ8WY36 941 aaPredicted RBP8.78□□□□□ -1
CLTC-206ENST00000475458 KDM2AQ9Y2K7 1162 aa8.78□□□□□ -1
CLTC-206ENST00000475458 ECM2O94769 699 aaPredicted RBP8.77□□□□□ -1.01
CLTC-206ENST00000475458 RNF39Q9H2S5 420 aa8.77□□□□□ -1.01
CLTC-206ENST00000475458 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.76□□□□□ -1.01
CLTC-206ENST00000475458 ZBTB12Q9Y330 459 aaPredicted RBP8.76□□□□□ -1.01
CLTC-206ENST00000475458 PAXIP1Q6ZW49 1069 aaPredicted RBP8.74□□□□□ -1.01
CLTC-206ENST00000475458 ABCB7O75027 752 aa8.73□□□□□ -1.01
CLTC-206ENST00000475458 CFAP44Q96MT7 982 aa8.71□□□□□ -1.02
CLTC-206ENST00000475458 RGL2O15211 777 aa8.7□□□□□ -1.02
CLTC-206ENST00000475458 STAG3Q9UJ98 1225 aa8.69□□□□□ -1.02
CLTC-206ENST00000475458 TPRNQ4KMQ1 711 aa8.67□□□□□ -1.02
CLTC-206ENST00000475458 ZNF692Q9BU19 519 aaPredicted RBP8.67□□□□□ -1.02
CLTC-206ENST00000475458 C1QBPQ07021 282 aaKnown RBP8.66□□□□□ -1.02
CLTC-206ENST00000475458 PLCD3Q8N3E9 789 aa8.66□□□□□ -1.02
CLTC-206ENST00000475458 TSHZ2Q9NRE2 1034 aa8.64□□□□□ -1.03
CLTC-206ENST00000475458 SPRYD3Q8NCJ5 442 aa8.63□□□□□ -1.03
CLTC-206ENST00000475458 SSUH2Q9Y2M2 353 aa8.63□□□□□ -1.03
CLTC-206ENST00000475458 SPDYE2BA6NHP3 402 aa8.61□□□□□ -1.03
CLTC-206ENST00000475458 SPDYE6P0CI01 402 aa8.61□□□□□ -1.03
CLTC-206ENST00000475458 SPDYE2Q495Y8 402 aa8.61□□□□□ -1.03
CLTC-206ENST00000475458 OSCARQ8IYS5 282 aa8.61□□□□□ -1.03
CLTC-206ENST00000475458 MIER1Q8N108 512 aa8.61□□□□□ -1.03
CLTC-206ENST00000475458 PABPN1Q86U42 306 aaKnown RBP eCLIP8.59□□□□□ -1.03
CLTC-206ENST00000475458 CHGAP10645 457 aaKnown RBP8.57□□□□□ -1.04
CLTC-206ENST00000475458 CIZ1Q9ULV3 898 aaPredicted RBP8.56□□□□□ -1.04
CLTC-206ENST00000475458 DSG3P32926 999 aa8.55□□□□□ -1.04
CLTC-206ENST00000475458 DNAJC5Q9H3Z4 198 aa8.52□□□□□ -1.05
CLTC-206ENST00000475458 ZBTB47Q9UFB7 747 aaPredicted RBP8.49□□□□□ -1.05
CLTC-206ENST00000475458 HS6ST3Q8IZP7 471 aa8.48□□□□□ -1.05
CLTC-206ENST00000475458 PLEKHG5O94827 1062 aa8.47□□□□□ -1.05
CLTC-206ENST00000475458 TRIM41Q8WV44 630 aa8.47□□□□□ -1.05
CLTC-206ENST00000475458 NBR1Q14596 966 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms