RNA–Protein interactions for RNA: ENST00000327238.14

MMS19-201, Transcript of MMS19 homolog, cytosolic iron-sulfur assembly component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MMS19, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMS19-201ENST00000327238 NISCHQ9Y2I1 1504 aa24.74■■□□□ 1.55
MMS19-201ENST00000327238 CCDC180Q9P1Z9 1646 aa21.34■■□□□ 1.01
MMS19-201ENST00000327238 DCAF8L2P0C7V8 631 aa20.91■□□□□ 0.94
MMS19-201ENST00000327238 ZCCHC6Q5VYS8 1495 aaKnown RBP20.75■□□□□ 0.91
MMS19-201ENST00000327238 SHROOM4Q9ULL8 1493 aa20.65■□□□□ 0.9
MMS19-201ENST00000327238 ABCC9O60706 1549 aa20.58■□□□□ 0.89
MMS19-201ENST00000327238 DCAF1Q9Y4B6 1507 aa20.24■□□□□ 0.83
MMS19-201ENST00000327238 MYO15BQ96JP2 1530 aa19.99■□□□□ 0.79
MMS19-201ENST00000327238 SCRIBQ14160 1630 aa19.97■□□□□ 0.79
MMS19-201ENST00000327238 NACADO15069 1562 aa19.94■□□□□ 0.78
MMS19-201ENST00000327238 SUPT5HO00267 1087 aaKnown RBP19.88■□□□□ 0.77
MMS19-201ENST00000327238 RB1CC1Q8TDY2 1594 aa19.81■□□□□ 0.76
MMS19-201ENST00000327238 PABPN1Q86U42 306 aaKnown RBP eCLIP19.56■□□□□ 0.724e-7■■■■□ 19.9
MMS19-201ENST00000327238 UNC13AQ9UPW8 1703 aa19.48■□□□□ 0.71
MMS19-201ENST00000327238 CECR2Q9BXF3 1484 aa19.4■□□□□ 0.7
MMS19-201ENST00000327238 RSF1Q96T23 1441 aaPredicted RBP19.3■□□□□ 0.68
MMS19-201ENST00000327238 BICRAQ9NZM4 1560 aa19.3■□□□□ 0.68
MMS19-201ENST00000327238 MROH2BQ7Z745 1585 aa19.23■□□□□ 0.67
MMS19-201ENST00000327238 WIZO95785 1651 aa19.07■□□□□ 0.64
MMS19-201ENST00000327238 BAZ1AQ9NRL2 1556 aaPredicted RBP19.05■□□□□ 0.64
MMS19-201ENST00000327238 SMARCA4P51532 1647 aa18.99■□□□□ 0.63
MMS19-201ENST00000327238 CHIC1Q5VXU3 224 aa18.88■□□□□ 0.61
MMS19-201ENST00000327238 EIF4G1Q04637 1599 aaKnown RBP18.72■□□□□ 0.59
MMS19-201ENST00000327238 TOP2AP11388 1531 aaKnown RBP18.72■□□□□ 0.59
MMS19-201ENST00000327238 ATAD2BQ9ULI0 1458 aa18.72■□□□□ 0.59
MMS19-201ENST00000327238 CCDC88BA6NC98 1476 aa18.67■□□□□ 0.58
MMS19-201ENST00000327238 BAZ1BQ9UIG0 1483 aaKnown RBP18.64■□□□□ 0.57
MMS19-201ENST00000327238 PEG3Q9GZU2 1588 aa18.63■□□□□ 0.57
MMS19-201ENST00000327238 SMARCA2P51531 1590 aa18.62■□□□□ 0.57
MMS19-201ENST00000327238 TRIM41Q8WV44 630 aa18.54■□□□□ 0.56
MMS19-201ENST00000327238 NCAPD3P42695 1498 aa18.48■□□□□ 0.55
MMS19-201ENST00000327238 CC2D2AQ9P2K1 1620 aa18.47■□□□□ 0.55
MMS19-201ENST00000327238 FAM9AQ8IZU1 332 aaPredicted RBP18.42■□□□□ 0.54
MMS19-201ENST00000327238 ABCC8Q09428 1581 aa18.4■□□□□ 0.54
MMS19-201ENST00000327238 HMGXB3Q12766 1538 aa18.38■□□□□ 0.53
MMS19-201ENST00000327238 DNAJC5BQ9UF47 199 aa18.36■□□□□ 0.53
MMS19-201ENST00000327238 LOC105371045A0A1W2PR82 267 aa18.36■□□□□ 0.53
MMS19-201ENST00000327238 EHMT2Q96KQ7 1210 aa18.35■□□□□ 0.53
MMS19-201ENST00000327238 WRNQ14191 1432 aaPredicted RBP eCLIP18.16■□□□□ 0.5
MMS19-201ENST00000327238 CFTRP13569 1480 aa18.12■□□□□ 0.49
MMS19-201ENST00000327238 CADPSQ9ULU8 1353 aa18.09■□□□□ 0.49
MMS19-201ENST00000327238 SYNJ1O43426 1573 aa18.09■□□□□ 0.49
MMS19-201ENST00000327238 NESP48681 1621 aa18.09■□□□□ 0.49
MMS19-201ENST00000327238 SOGA1O94964 1423 aa18.08■□□□□ 0.48
MMS19-201ENST00000327238 RUSC2Q8N2Y8 1516 aa18.04■□□□□ 0.48
MMS19-201ENST00000327238 CUX1P39880 1505 aa17.94■□□□□ 0.46
MMS19-201ENST00000327238 FANCD2Q9BXW9 1451 aa17.92■□□□□ 0.46
MMS19-201ENST00000327238 TOP2BQ02880 1626 aa17.9■□□□□ 0.46
MMS19-201ENST00000327238 CSRNP3Q8WYN3 585 aa17.89■□□□□ 0.45
MMS19-201ENST00000327238 PRDM2Q13029 1718 aa17.84■□□□□ 0.45
MMS19-201ENST00000327238 BIVM-ERCC5R4GMW8 1640 aa17.82■□□□□ 0.44
MMS19-201ENST00000327238 LAMC3Q9Y6N6 1575 aa17.8■□□□□ 0.44
MMS19-201ENST00000327238 UBTFP17480 764 aaKnown RBP17.79■□□□□ 0.44
MMS19-201ENST00000327238 CEP164Q9UPV0 1460 aa17.76■□□□□ 0.43
MMS19-201ENST00000327238 FGD5Q6ZNL6 1462 aa17.76■□□□□ 0.43
MMS19-201ENST00000327238 PDS5BQ9NTI5 1447 aa17.74■□□□□ 0.43
MMS19-201ENST00000327238 RANGAP1P46060 587 aaPredicted RBP17.74■□□□□ 0.43
MMS19-201ENST00000327238 EEA1Q15075 1411 aa17.74■□□□□ 0.43
MMS19-201ENST00000327238 KIF21AQ7Z4S6 1674 aa17.71■□□□□ 0.43
MMS19-201ENST00000327238 RAD54L2Q9Y4B4 1467 aa17.71■□□□□ 0.43
MMS19-201ENST00000327238 TOPBP1Q92547 1522 aa17.7■□□□□ 0.42
MMS19-201ENST00000327238 URB2Q14146 1524 aaKnown RBP17.7■□□□□ 0.42
MMS19-201ENST00000327238 CUX2O14529 1486 aa17.69■□□□□ 0.42
MMS19-201ENST00000327238 KIF27Q86VH2 1401 aa17.66■□□□□ 0.42
MMS19-201ENST00000327238 DNMBPQ6XZF7 1577 aa17.66■□□□□ 0.42
MMS19-201ENST00000327238 RAPGEF2Q9Y4G8 1499 aa17.65■□□□□ 0.42
MMS19-201ENST00000327238 POLA1P09884 1462 aaPredicted RBP17.65■□□□□ 0.42
MMS19-201ENST00000327238 PPARGC1BQ86YN6 1023 aaKnown RBP17.64■□□□□ 0.41
MMS19-201ENST00000327238 GOLGA3Q08378 1498 aa17.62■□□□□ 0.41
MMS19-201ENST00000327238 CEP162Q5TB80 1403 aa17.58■□□□□ 0.41
MMS19-201ENST00000327238 TDRD9Q8NDG6 1382 aaKnown RBP17.58■□□□□ 0.4
MMS19-201ENST00000327238 TNIKQ9UKE5 1360 aa17.58■□□□□ 0.4
MMS19-201ENST00000327238 ERCC6Q03468 1493 aa17.57■□□□□ 0.4
MMS19-201ENST00000327238 IGF1RP08069 1367 aa17.56■□□□□ 0.4
MMS19-201ENST00000327238 PCGF6Q9BYE7 350 aa17.54■□□□□ 0.4
MMS19-201ENST00000327238 KIF21BO75037 1637 aa17.54■□□□□ 0.4
MMS19-201ENST00000327238 TTBK1Q5TCY1 1321 aaPredicted RBP17.53■□□□□ 0.4
MMS19-201ENST00000327238 PRXQ9BXM0 1461 aa17.53■□□□□ 0.4
MMS19-201ENST00000327238 MRC2Q9UBG0 1479 aa17.51■□□□□ 0.39
MMS19-201ENST00000327238 ABCA10Q8WWZ4 1543 aa17.49■□□□□ 0.39
MMS19-201ENST00000327238 CARMIL1Q5VZK9 1371 aa17.47■□□□□ 0.39
MMS19-201ENST00000327238 CLIP1P30622 1438 aa17.43■□□□□ 0.38
MMS19-201ENST00000327238 AQRO60306 1485 aaKnown RBP eCLIP17.43■□□□□ 0.383e-9■■■■■ 36.3
MMS19-201ENST00000327238 THOC2Q8NI27 1593 aaKnown RBP17.42■□□□□ 0.38
MMS19-201ENST00000327238 ERICH3Q5RHP9 1530 aa17.4■□□□□ 0.38
MMS19-201ENST00000327238 GAPVD1Q14C86 1478 aa17.39■□□□□ 0.38
MMS19-201ENST00000327238 ZNF608Q9ULD9 1512 aaPredicted RBP17.38■□□□□ 0.37
MMS19-201ENST00000327238 TARBP1Q13395 1621 aaKnown RBP17.38■□□□□ 0.37
MMS19-201ENST00000327238 WDR62O43379 1518 aa17.38■□□□□ 0.37
MMS19-201ENST00000327238 WDR97A6NE52 1622 aa17.36■□□□□ 0.37
MMS19-201ENST00000327238 P3H3Q8IVL6 736 aa17.33■□□□□ 0.36
MMS19-201ENST00000327238 ABCA5Q8WWZ7 1642 aa17.33■□□□□ 0.36
MMS19-201ENST00000327238 TRIM26Q12899 539 aaPredicted RBP17.31■□□□□ 0.36
MMS19-201ENST00000327238 IFT140Q96RY7 1462 aa17.27■□□□□ 0.36
MMS19-201ENST00000327238 ARAP1Q96P48 1450 aa17.25■□□□□ 0.35
MMS19-201ENST00000327238 FBLN2P98095 1184 aa17.23■□□□□ 0.35
MMS19-201ENST00000327238 ARHGAP35Q9NRY4 1499 aa17.22■□□□□ 0.35
MMS19-201ENST00000327238 CUL7Q14999 1698 aa17.22■□□□□ 0.35
MMS19-201ENST00000327238 VPS8Q8N3P4 1428 aa17.22■□□□□ 0.35
MMS19-201ENST00000327238 PBRM1Q86U86 1689 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms