RNA–Protein interactions for RNA: ENST00000415383.5

MMS19-204, Transcript of MMS19 homolog, cytosolic iron-sulfur assembly component, humanhuman

TSL 1 (best)

Gene MMS19, Length 3,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMS19-204ENST00000415383 NISCHQ9Y2I1 1504 aa24.43■■□□□ 1.5
MMS19-204ENST00000415383 CCDC180Q9P1Z9 1646 aa20.82■□□□□ 0.92
MMS19-204ENST00000415383 SHROOM4Q9ULL8 1493 aa20.7■□□□□ 0.9
MMS19-204ENST00000415383 ZCCHC6Q5VYS8 1495 aaKnown RBP20.59■□□□□ 0.89
MMS19-204ENST00000415383 DCAF8L2P0C7V8 631 aa20.41■□□□□ 0.86
MMS19-204ENST00000415383 SUPT5HO00267 1087 aaKnown RBP20.09■□□□□ 0.81
MMS19-204ENST00000415383 DCAF1Q9Y4B6 1507 aa19.95■□□□□ 0.78
MMS19-204ENST00000415383 ABCC9O60706 1549 aa19.74■□□□□ 0.75
MMS19-204ENST00000415383 SCRIBQ14160 1630 aa19.6■□□□□ 0.73
MMS19-204ENST00000415383 MYO15BQ96JP2 1530 aa19.48■□□□□ 0.71
MMS19-204ENST00000415383 CHIC1Q5VXU3 224 aa19.37■□□□□ 0.69
MMS19-204ENST00000415383 NACADO15069 1562 aa19.34■□□□□ 0.69
MMS19-204ENST00000415383 RSF1Q96T23 1441 aaPredicted RBP19.25■□□□□ 0.67
MMS19-204ENST00000415383 CECR2Q9BXF3 1484 aa19.2■□□□□ 0.66
MMS19-204ENST00000415383 RB1CC1Q8TDY2 1594 aa19.09■□□□□ 0.65
MMS19-204ENST00000415383 MROH2BQ7Z745 1585 aa19.05■□□□□ 0.64
MMS19-204ENST00000415383 UNC13AQ9UPW8 1703 aa18.96■□□□□ 0.63
MMS19-204ENST00000415383 WIZO95785 1651 aa18.93■□□□□ 0.62
MMS19-204ENST00000415383 LOC105371045A0A1W2PR82 267 aa18.88■□□□□ 0.61
MMS19-204ENST00000415383 PABPN1Q86U42 306 aaKnown RBP eCLIP18.88■□□□□ 0.614e-7■■■■□ 19.9
MMS19-204ENST00000415383 BICRAQ9NZM4 1560 aa18.76■□□□□ 0.59
MMS19-204ENST00000415383 BAZ1AQ9NRL2 1556 aaPredicted RBP18.72■□□□□ 0.59
MMS19-204ENST00000415383 SMARCA4P51532 1647 aa18.67■□□□□ 0.58
MMS19-204ENST00000415383 TRIM41Q8WV44 630 aa18.65■□□□□ 0.58
MMS19-204ENST00000415383 FAM9AQ8IZU1 332 aaPredicted RBP18.61■□□□□ 0.57
MMS19-204ENST00000415383 EHMT2Q96KQ7 1210 aa18.53■□□□□ 0.56
MMS19-204ENST00000415383 CCDC88BA6NC98 1476 aa18.52■□□□□ 0.56
MMS19-204ENST00000415383 TOP2AP11388 1531 aaKnown RBP18.52■□□□□ 0.55
MMS19-204ENST00000415383 EIF4G1Q04637 1599 aaKnown RBP18.51■□□□□ 0.55
MMS19-204ENST00000415383 SMARCA2P51531 1590 aa18.47■□□□□ 0.55
MMS19-204ENST00000415383 PCGF6Q9BYE7 350 aa18.41■□□□□ 0.54
MMS19-204ENST00000415383 ABCC8Q09428 1581 aa18.4■□□□□ 0.54
MMS19-204ENST00000415383 PEG3Q9GZU2 1588 aa18.3■□□□□ 0.52
MMS19-204ENST00000415383 ATAD2BQ9ULI0 1458 aa18.3■□□□□ 0.52
MMS19-204ENST00000415383 SOGA1O94964 1423 aa18.17■□□□□ 0.5
MMS19-204ENST00000415383 BAZ1BQ9UIG0 1483 aaKnown RBP18.17■□□□□ 0.5
MMS19-204ENST00000415383 RUSC2Q8N2Y8 1516 aa18.16■□□□□ 0.5
MMS19-204ENST00000415383 HRCP23327 699 aa18.1■□□□□ 0.49
MMS19-204ENST00000415383 PPARGC1BQ86YN6 1023 aaKnown RBP18.07■□□□□ 0.48
MMS19-204ENST00000415383 SYNJ1O43426 1573 aa18.03■□□□□ 0.48
MMS19-204ENST00000415383 WRNQ14191 1432 aaPredicted RBP eCLIP18.02■□□□□ 0.48
MMS19-204ENST00000415383 TRIM26Q12899 539 aaPredicted RBP18.02■□□□□ 0.48
MMS19-204ENST00000415383 NCAPD3P42695 1498 aa17.97■□□□□ 0.47
MMS19-204ENST00000415383 CSRNP3Q8WYN3 585 aa17.93■□□□□ 0.46
MMS19-204ENST00000415383 HMGXB3Q12766 1538 aa17.88■□□□□ 0.45
MMS19-204ENST00000415383 CEP162Q5TB80 1403 aa17.82■□□□□ 0.44
MMS19-204ENST00000415383 UBTFP17480 764 aaKnown RBP17.81■□□□□ 0.44
MMS19-204ENST00000415383 TTBK1Q5TCY1 1321 aaPredicted RBP17.8■□□□□ 0.44
MMS19-204ENST00000415383 TNIKQ9UKE5 1360 aa17.78■□□□□ 0.44
MMS19-204ENST00000415383 EEA1Q15075 1411 aa17.76■□□□□ 0.43
MMS19-204ENST00000415383 TOP2BQ02880 1626 aa17.75■□□□□ 0.43
MMS19-204ENST00000415383 CC2D2AQ9P2K1 1620 aa17.75■□□□□ 0.43
MMS19-204ENST00000415383 CFTRP13569 1480 aa17.74■□□□□ 0.43
MMS19-204ENST00000415383 CUX1P39880 1505 aa17.74■□□□□ 0.43
MMS19-204ENST00000415383 GOLGA3Q08378 1498 aa17.71■□□□□ 0.43
MMS19-204ENST00000415383 RAPGEF2Q9Y4G8 1499 aa17.71■□□□□ 0.43
MMS19-204ENST00000415383 DNAJC5BQ9UF47 199 aa17.69■□□□□ 0.42
MMS19-204ENST00000415383 BIVM-ERCC5R4GMW8 1640 aa17.68■□□□□ 0.42
MMS19-204ENST00000415383 RANGAP1P46060 587 aaPredicted RBP17.68■□□□□ 0.42
MMS19-204ENST00000415383 CEP164Q9UPV0 1460 aa17.63■□□□□ 0.41
MMS19-204ENST00000415383 KIF21BO75037 1637 aa17.63■□□□□ 0.41
MMS19-204ENST00000415383 CADPSQ9ULU8 1353 aa17.6■□□□□ 0.41
MMS19-204ENST00000415383 NESP48681 1621 aa17.55■□□□□ 0.4
MMS19-204ENST00000415383 CLIP1P30622 1438 aa17.54■□□□□ 0.4
MMS19-204ENST00000415383 PRXQ9BXM0 1461 aa17.52■□□□□ 0.4
MMS19-204ENST00000415383 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.52■□□□□ 0.4
MMS19-204ENST00000415383 PRDM2Q13029 1718 aa17.49■□□□□ 0.39
MMS19-204ENST00000415383 KIF27Q86VH2 1401 aa17.45■□□□□ 0.38
MMS19-204ENST00000415383 FGD5Q6ZNL6 1462 aa17.44■□□□□ 0.38
MMS19-204ENST00000415383 FANCD2Q9BXW9 1451 aa17.44■□□□□ 0.38
MMS19-204ENST00000415383 CUX2O14529 1486 aa17.42■□□□□ 0.38
MMS19-204ENST00000415383 IGF1RP08069 1367 aa17.41■□□□□ 0.38
MMS19-204ENST00000415383 VPS8Q8N3P4 1428 aa17.4■□□□□ 0.38
MMS19-204ENST00000415383 ERICH3Q5RHP9 1530 aa17.39■□□□□ 0.37
MMS19-204ENST00000415383 RAD54L2Q9Y4B4 1467 aa17.38■□□□□ 0.37
MMS19-204ENST00000415383 ARAP1Q96P48 1450 aa17.37■□□□□ 0.37
MMS19-204ENST00000415383 KANK4Q5T7N3 995 aaPredicted RBP17.31■□□□□ 0.36
MMS19-204ENST00000415383 CCER1Q8TC90 406 aaPredicted RBP17.31■□□□□ 0.36
MMS19-204ENST00000415383 ZEB1P37275 1124 aaPredicted RBP17.3■□□□□ 0.36
MMS19-204ENST00000415383 TOPBP1Q92547 1522 aa17.3■□□□□ 0.36
MMS19-204ENST00000415383 POLA1P09884 1462 aaPredicted RBP17.29■□□□□ 0.36
MMS19-204ENST00000415383 HNRNPUL2Q1KMD3 747 aaKnown RBP17.28■□□□□ 0.36
MMS19-204ENST00000415383 ARHGAP35Q9NRY4 1499 aa17.27■□□□□ 0.36
MMS19-204ENST00000415383 CARMIL1Q5VZK9 1371 aa17.27■□□□□ 0.36
MMS19-204ENST00000415383 URB2Q14146 1524 aaKnown RBP17.27■□□□□ 0.35
MMS19-204ENST00000415383 DNMBPQ6XZF7 1577 aa17.25■□□□□ 0.35
MMS19-204ENST00000415383 LAMC3Q9Y6N6 1575 aa17.19■□□□□ 0.34
MMS19-204ENST00000415383 APLP2Q06481 763 aa17.19■□□□□ 0.34
MMS19-204ENST00000415383 P3H3Q8IVL6 736 aa17.18■□□□□ 0.34
MMS19-204ENST00000415383 ABCA10Q8WWZ4 1543 aa17.18■□□□□ 0.34
MMS19-204ENST00000415383 TDRD9Q8NDG6 1382 aaKnown RBP17.18■□□□□ 0.34
MMS19-204ENST00000415383 KIF21AQ7Z4S6 1674 aa17.16■□□□□ 0.34
MMS19-204ENST00000415383 PDS5BQ9NTI5 1447 aa17.08■□□□□ 0.33
MMS19-204ENST00000415383 WDR97A6NE52 1622 aa17.08■□□□□ 0.32
MMS19-204ENST00000415383 FHOD3Q2V2M9 1422 aa17.04■□□□□ 0.32
MMS19-204ENST00000415383 ABCA5Q8WWZ7 1642 aa17.02■□□□□ 0.32
MMS19-204ENST00000415383 GAPVD1Q14C86 1478 aa17■□□□□ 0.31
MMS19-204ENST00000415383 TARBP1Q13395 1621 aaKnown RBP16.99■□□□□ 0.31
MMS19-204ENST00000415383 ATP1B4Q9UN42 357 aaPredicted RBP16.98■□□□□ 0.31
MMS19-204ENST00000415383 AQRO60306 1485 aaKnown RBP eCLIP16.98■□□□□ 0.313e-9■■■■■ 36.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms