RNA–Protein interactions for RNA: ENST00000498694.1

CTPS1-212, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 599 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-212ENST00000498694 AEBP2Q6ZN18 517 aaPredicted RBP14.05□□□□□ -0.16
CTPS1-212ENST00000498694 CHIC1Q5VXU3 224 aa13.77□□□□□ -0.21
CTPS1-212ENST00000498694 PHF23Q9BUL5 403 aaPredicted RBP12.11□□□□□ -0.47
CTPS1-212ENST00000498694 SENP3Q9H4L4 574 aaPredicted RBP11.93□□□□□ -0.5
CTPS1-212ENST00000498694 PLPPR3Q6T4P5 718 aa11.21□□□□□ -0.61
CTPS1-212ENST00000498694 FOXD1Q16676 465 aa11.07□□□□□ -0.64
CTPS1-212ENST00000498694 ADRA2BP18089 450 aa10.7□□□□□ -0.7
CTPS1-212ENST00000498694 PPP6R1Q9UPN7 881 aa10.68□□□□□ -0.7
CTPS1-212ENST00000498694 POTEDQ86YR6 584 aa10.5□□□□□ -0.73
CTPS1-212ENST00000498694 PIAS4Q8N2W9 510 aaPredicted RBP10.48□□□□□ -0.73
CTPS1-212ENST00000498694 MSH5O43196 834 aa10.38□□□□□ -0.75
CTPS1-212ENST00000498694 PPP4R3CPQ6ZMV5 832 aa9.89□□□□□ -0.83
CTPS1-212ENST00000498694 NISCHQ9Y2I1 1504 aa9.82□□□□□ -0.84
CTPS1-212ENST00000498694 SCAF1Q9H7N4 1312 aaKnown RBP9.78□□□□□ -0.84
CTPS1-212ENST00000498694 KCNA4P22459 653 aa9.72□□□□□ -0.85
CTPS1-212ENST00000498694 MAPK8IP2Q13387 824 aaPredicted RBP9.69□□□□□ -0.86
CTPS1-212ENST00000498694 NCBP3Q53F19 620 aaKnown RBP9.65□□□□□ -0.86
CTPS1-212ENST00000498694 CNKSR2Q8WXI2 1034 aa9.59□□□□□ -0.87
CTPS1-212ENST00000498694 DMRT2Q9Y5R5 561 aa9.52□□□□□ -0.89
CTPS1-212ENST00000498694 NPM3O75607 178 aaKnown RBP9.5□□□□□ -0.89
CTPS1-212ENST00000498694 RNF216Q9NWF9 866 aaPredicted RBP9.38□□□□□ -0.91
CTPS1-212ENST00000498694 HOXD11P31277 338 aaPredicted RBP9.32□□□□□ -0.92
CTPS1-212ENST00000498694 SLC4A1APQ9BWU0 796 aaKnown RBP9.27□□□□□ -0.93
CTPS1-212ENST00000498694 DCAF8L1A6NGE4 600 aa9.2□□□□□ -0.94
CTPS1-212ENST00000498694 DNAJC5BQ9UF47 199 aa9.12□□□□□ -0.95
CTPS1-212ENST00000498694 EHMT2Q96KQ7 1210 aa9.1□□□□□ -0.95
CTPS1-212ENST00000498694 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.95□□□□□ -0.981e-6■■□□□ 13.4
CTPS1-212ENST00000498694 SLC4A2P04920 1241 aa8.94□□□□□ -0.98
CTPS1-212ENST00000498694 FOXD4L1Q9NU39 408 aa8.93□□□□□ -0.98
CTPS1-212ENST00000498694 ZBTB22O15209 634 aa8.92□□□□□ -0.98
CTPS1-212ENST00000498694 CSRNP3Q8WYN3 585 aa8.91□□□□□ -0.98
CTPS1-212ENST00000498694 CACNB1Q02641 598 aaPredicted RBP8.87□□□□□ -0.99
CTPS1-212ENST00000498694 RNF39Q9H2S5 420 aa8.82□□□□□ -1
CTPS1-212ENST00000498694 MYCNP04198 464 aaPredicted RBP8.78□□□□□ -1
CTPS1-212ENST00000498694 U3KPZ7 1027 aaPredicted RBP8.77□□□□□ -1.01
CTPS1-212ENST00000498694 CCDC180Q9P1Z9 1646 aa8.76□□□□□ -1.01
CTPS1-212ENST00000498694 C1QBPQ07021 282 aaKnown RBP8.72□□□□□ -1.01
CTPS1-212ENST00000498694 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.68□□□□□ -1.02
CTPS1-212ENST00000498694 HNRNPUL2Q1KMD3 747 aaKnown RBP8.68□□□□□ -1.02
CTPS1-212ENST00000498694 SAMD1Q6SPF0 538 aaPredicted RBP8.65□□□□□ -1.02
CTPS1-212ENST00000498694 APLP2Q06481 763 aa8.59□□□□□ -1.03
CTPS1-212ENST00000498694 ATXN8OSP0DMR3 200 aa8.57□□□□□ -1.04
CTPS1-212ENST00000498694 SPINK5Q9NQ38 1064 aaPredicted RBP8.54□□□□□ -1.04
CTPS1-212ENST00000498694 ATF5Q9Y2D1 282 aaPredicted RBP8.54□□□□□ -1.04
CTPS1-212ENST00000498694 CAPN15O75808 1086 aa8.53□□□□□ -1.04
CTPS1-212ENST00000498694 TRHP20396 242 aaPredicted RBP8.5□□□□□ -1.05
CTPS1-212ENST00000498694 ZNF219Q9P2Y4 722 aaPredicted RBP8.46□□□□□ -1.06
CTPS1-212ENST00000498694 ABCB7O75027 752 aa8.37□□□□□ -1.07
CTPS1-212ENST00000498694 POLA2Q14181 598 aa8.34□□□□□ -1.07
CTPS1-212ENST00000498694 DSG3P32926 999 aa8.32□□□□□ -1.08
CTPS1-212ENST00000498694 ABCC9O60706 1549 aa8.3□□□□□ -1.08
CTPS1-212ENST00000498694 ZCCHC6Q5VYS8 1495 aaKnown RBP8.28□□□□□ -1.08
CTPS1-212ENST00000498694 FBLN2P98095 1184 aa8.21□□□□□ -1.1
CTPS1-212ENST00000498694 ZBTB12Q9Y330 459 aaPredicted RBP8.2□□□□□ -1.1
CTPS1-212ENST00000498694 DCAF1Q9Y4B6 1507 aa8.19□□□□□ -1.1
CTPS1-212ENST00000498694 MYO15BQ96JP2 1530 aa8.19□□□□□ -1.1
CTPS1-212ENST00000498694 MKRN4PQ13434 485 aaPredicted RBP8.16□□□□□ -1.1
CTPS1-212ENST00000498694 NACADO15069 1562 aa8.13□□□□□ -1.11
CTPS1-212ENST00000498694 POTEHQ6S545 545 aa8.1□□□□□ -1.11
CTPS1-212ENST00000498694 RB1CC1Q8TDY2 1594 aa8.1□□□□□ -1.11
CTPS1-212ENST00000498694 FKBP8Q14318 412 aa8.09□□□□□ -1.11
CTPS1-212ENST00000498694 OSCARQ8IYS5 282 aa8.07□□□□□ -1.12
CTPS1-212ENST00000498694 SPDYE4A6NLX3 237 aa8.03□□□□□ -1.12
CTPS1-212ENST00000498694 UNC13AQ9UPW8 1703 aa7.98□□□□□ -1.13
CTPS1-212ENST00000498694 SPDYE2BA6NHP3 402 aa7.97□□□□□ -1.13
CTPS1-212ENST00000498694 SPDYE6P0CI01 402 aa7.97□□□□□ -1.13
CTPS1-212ENST00000498694 SPDYE2Q495Y8 402 aa7.97□□□□□ -1.13
CTPS1-212ENST00000498694 ZNF692Q9BU19 519 aaPredicted RBP7.97□□□□□ -1.13
CTPS1-212ENST00000498694 RBM42Q9BTD8 480 aaKnown RBP7.95□□□□□ -1.14
CTPS1-212ENST00000498694 SCRIBQ14160 1630 aa7.93□□□□□ -1.14
CTPS1-212ENST00000498694 SSUH2Q9Y2M2 353 aa7.9□□□□□ -1.14
CTPS1-212ENST00000498694 BICRAQ9NZM4 1560 aa7.88□□□□□ -1.15
CTPS1-212ENST00000498694 SHROOM4Q9ULL8 1493 aa7.87□□□□□ -1.15
CTPS1-212ENST00000498694 PABPN1Q86U42 306 aaKnown RBP eCLIP7.87□□□□□ -1.15
CTPS1-212ENST00000498694 AKT1S1Q96B36 256 aa7.85□□□□□ -1.15
CTPS1-212ENST00000498694 DCAF8L2P0C7V8 631 aa7.84□□□□□ -1.15
CTPS1-212ENST00000498694 PROM2Q8N271 834 aa7.83□□□□□ -1.16
CTPS1-212ENST00000498694 REM2Q8IYK8 340 aaPredicted RBP7.78□□□□□ -1.16
CTPS1-212ENST00000498694 FBXO3Q9UK99 471 aa7.77□□□□□ -1.17
CTPS1-212ENST00000498694 CLEC11AQ9Y240 323 aa7.75□□□□□ -1.17
CTPS1-212ENST00000498694 SPDYE1Q8NFV5 336 aaPredicted RBP7.74□□□□□ -1.17
CTPS1-212ENST00000498694 STAG3Q9UJ98 1225 aa7.73□□□□□ -1.17
CTPS1-212ENST00000498694 CHRDL2Q6WN34 429 aa7.71□□□□□ -1.18
CTPS1-212ENST00000498694 PITPNM1O00562 1244 aa7.69□□□□□ -1.18
CTPS1-212ENST00000498694 PRR29P0C7W0 189 aa7.66□□□□□ -1.18
CTPS1-212ENST00000498694 VASPP50552 380 aaPredicted RBP7.66□□□□□ -1.18
CTPS1-212ENST00000498694 EIF4G1Q04637 1599 aaKnown RBP7.65□□□□□ -1.18
CTPS1-212ENST00000498694 MIER1Q8N108 512 aa7.63□□□□□ -1.19
CTPS1-212ENST00000498694 PLCD3Q8N3E9 789 aa7.63□□□□□ -1.19
CTPS1-212ENST00000498694 SMARCA4P51532 1647 aa7.63□□□□□ -1.19
CTPS1-212ENST00000498694 BAZ1AQ9NRL2 1556 aaPredicted RBP7.62□□□□□ -1.19
CTPS1-212ENST00000498694 CECR2Q9BXF3 1484 aa7.6□□□□□ -1.19
CTPS1-212ENST00000498694 PLEKHG5O94827 1062 aa7.59□□□□□ -1.19
CTPS1-212ENST00000498694 PEG3Q9GZU2 1588 aa7.59□□□□□ -1.2
CTPS1-212ENST00000498694 KLHL34Q8N239 644 aa7.57□□□□□ -1.2
CTPS1-212ENST00000498694 MROH2BQ7Z745 1585 aa7.56□□□□□ -1.2
CTPS1-212ENST00000498694 CC2D2AQ9P2K1 1620 aa7.56□□□□□ -1.2
CTPS1-212ENST00000498694 IFNLR1Q8IU57 520 aaPredicted RBP7.55□□□□□ -1.2
CTPS1-212ENST00000498694 CHADLQ6NUI6 762 aa7.54□□□□□ -1.2
CTPS1-212ENST00000498694 CREBZFQ9NS37 354 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms