RNA–Protein interactions for RNA: ENST00000355839.10

MMS19-202, Transcript of MMS19 homolog, cytosolic iron-sulfur assembly component, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMS19, Length 3,555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMS19-202ENST00000355839 NISCHQ9Y2I1 1504 aa21.63■■□□□ 1.05
MMS19-202ENST00000355839 CCDC180Q9P1Z9 1646 aa18.64■□□□□ 0.57
MMS19-202ENST00000355839 ZCCHC6Q5VYS8 1495 aaKnown RBP18.34■□□□□ 0.53
MMS19-202ENST00000355839 SHROOM4Q9ULL8 1493 aa18.25■□□□□ 0.51
MMS19-202ENST00000355839 DCAF1Q9Y4B6 1507 aa17.9■□□□□ 0.46
MMS19-202ENST00000355839 SUPT5HO00267 1087 aaKnown RBP17.84■□□□□ 0.45
MMS19-202ENST00000355839 DCAF8L2P0C7V8 631 aa17.69■□□□□ 0.42
MMS19-202ENST00000355839 MYO15BQ96JP2 1530 aa17.46■□□□□ 0.39
MMS19-202ENST00000355839 ABCC9O60706 1549 aa17.29■□□□□ 0.36
MMS19-202ENST00000355839 CHIC1Q5VXU3 224 aa17.26■□□□□ 0.35
MMS19-202ENST00000355839 SCRIBQ14160 1630 aa17.17■□□□□ 0.34
MMS19-202ENST00000355839 NACADO15069 1562 aa17.09■□□□□ 0.33
MMS19-202ENST00000355839 RSF1Q96T23 1441 aaPredicted RBP16.99■□□□□ 0.31
MMS19-202ENST00000355839 UNC13AQ9UPW8 1703 aa16.97■□□□□ 0.31
MMS19-202ENST00000355839 HRCP23327 699 aa16.9■□□□□ 0.3
MMS19-202ENST00000355839 LOC105371045A0A1W2PR82 267 aa16.88■□□□□ 0.29
MMS19-202ENST00000355839 RB1CC1Q8TDY2 1594 aa16.86■□□□□ 0.29
MMS19-202ENST00000355839 CECR2Q9BXF3 1484 aa16.85■□□□□ 0.29
MMS19-202ENST00000355839 PCGF6Q9BYE7 350 aa16.83■□□□□ 0.28
MMS19-202ENST00000355839 MROH2BQ7Z745 1585 aa16.81■□□□□ 0.28
MMS19-202ENST00000355839 PPARGC1BQ86YN6 1023 aaKnown RBP16.78■□□□□ 0.28
MMS19-202ENST00000355839 EIF4G1Q04637 1599 aaKnown RBP16.77■□□□□ 0.27
MMS19-202ENST00000355839 WIZO95785 1651 aa16.75■□□□□ 0.27
MMS19-202ENST00000355839 BAZ1AQ9NRL2 1556 aaPredicted RBP16.65■□□□□ 0.26
MMS19-202ENST00000355839 BICRAQ9NZM4 1560 aa16.65■□□□□ 0.26
MMS19-202ENST00000355839 SMARCA4P51532 1647 aa16.55■□□□□ 0.24
MMS19-202ENST00000355839 FAM9AQ8IZU1 332 aaPredicted RBP16.53■□□□□ 0.24
MMS19-202ENST00000355839 EHMT2Q96KQ7 1210 aa16.52■□□□□ 0.24
MMS19-202ENST00000355839 TRIM41Q8WV44 630 aa16.5■□□□□ 0.23
MMS19-202ENST00000355839 TOP2AP11388 1531 aaKnown RBP16.44■□□□□ 0.22
MMS19-202ENST00000355839 PEG3Q9GZU2 1588 aa16.42■□□□□ 0.22
MMS19-202ENST00000355839 SMARCA2P51531 1590 aa16.41■□□□□ 0.22
MMS19-202ENST00000355839 PELP1Q8IZL8 1130 aaKnown RBP16.39■□□□□ 0.21
MMS19-202ENST00000355839 TRIM26Q12899 539 aaPredicted RBP16.34■□□□□ 0.21
MMS19-202ENST00000355839 CCDC88BA6NC98 1476 aa16.31■□□□□ 0.2
MMS19-202ENST00000355839 ABCC8Q09428 1581 aa16.2■□□□□ 0.18
MMS19-202ENST00000355839 SCAF1Q9H7N4 1312 aaKnown RBP16.12■□□□□ 0.17
MMS19-202ENST00000355839 ATAD2BQ9ULI0 1458 aa16.07■□□□□ 0.16
MMS19-202ENST00000355839 PABPN1Q86U42 306 aaKnown RBP eCLIP16.06■□□□□ 0.164e-7■■■■□ 19.9
MMS19-202ENST00000355839 SYNJ1O43426 1573 aa15.99■□□□□ 0.15
MMS19-202ENST00000355839 RUSC2Q8N2Y8 1516 aa15.97■□□□□ 0.15
MMS19-202ENST00000355839 TTBK1Q5TCY1 1321 aaPredicted RBP15.97■□□□□ 0.15
MMS19-202ENST00000355839 SOGA1O94964 1423 aa15.94■□□□□ 0.14
MMS19-202ENST00000355839 ZEB1P37275 1124 aaPredicted RBP15.89■□□□□ 0.13
MMS19-202ENST00000355839 HMGXB3Q12766 1538 aa15.87■□□□□ 0.13
MMS19-202ENST00000355839 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.86■□□□□ 0.13
MMS19-202ENST00000355839 BIVM-ERCC5R4GMW8 1640 aa15.86■□□□□ 0.13
MMS19-202ENST00000355839 BAZ1BQ9UIG0 1483 aaKnown RBP15.85■□□□□ 0.13
MMS19-202ENST00000355839 NCAPD3P42695 1498 aa15.82■□□□□ 0.12
MMS19-202ENST00000355839 TOP2BQ02880 1626 aa15.81■□□□□ 0.12
MMS19-202ENST00000355839 WRNQ14191 1432 aaPredicted RBP eCLIP15.8■□□□□ 0.12
MMS19-202ENST00000355839 CEP162Q5TB80 1403 aa15.8■□□□□ 0.12
MMS19-202ENST00000355839 PRDM2Q13029 1718 aa15.79■□□□□ 0.12
MMS19-202ENST00000355839 KIF21BO75037 1637 aa15.78■□□□□ 0.12
MMS19-202ENST00000355839 UBTFP17480 764 aaKnown RBP15.74■□□□□ 0.11
MMS19-202ENST00000355839 MYT1Q01538 1121 aa15.74■□□□□ 0.11
MMS19-202ENST00000355839 CSRNP3Q8WYN3 585 aa15.74■□□□□ 0.11
MMS19-202ENST00000355839 EEA1Q15075 1411 aa15.72■□□□□ 0.11
MMS19-202ENST00000355839 CCER1Q8TC90 406 aaPredicted RBP15.72■□□□□ 0.11
MMS19-202ENST00000355839 TNIKQ9UKE5 1360 aa15.7■□□□□ 0.1
MMS19-202ENST00000355839 CUX1P39880 1505 aa15.67■□□□□ 0.1
MMS19-202ENST00000355839 CFTRP13569 1480 aa15.65■□□□□ 0.1
MMS19-202ENST00000355839 ACIN1Q9UKV3 1341 aaKnown RBP15.64■□□□□ 0.09
MMS19-202ENST00000355839 NEUROD1Q13562 356 aa15.64■□□□□ 0.09
MMS19-202ENST00000355839 GOLGA3Q08378 1498 aa15.61■□□□□ 0.09
MMS19-202ENST00000355839 RANGAP1P46060 587 aaPredicted RBP15.61■□□□□ 0.09
MMS19-202ENST00000355839 RAPGEF2Q9Y4G8 1499 aa15.57■□□□□ 0.08
MMS19-202ENST00000355839 GTF3C3Q9Y5Q9 886 aa15.56■□□□□ 0.08
MMS19-202ENST00000355839 PRXQ9BXM0 1461 aa15.55■□□□□ 0.08
MMS19-202ENST00000355839 CEP164Q9UPV0 1460 aa15.55■□□□□ 0.08
MMS19-202ENST00000355839 CC2D2AQ9P2K1 1620 aa15.53■□□□□ 0.08
MMS19-202ENST00000355839 ERICH3Q5RHP9 1530 aa15.51■□□□□ 0.07
MMS19-202ENST00000355839 CLIP1P30622 1438 aa15.48■□□□□ 0.07
MMS19-202ENST00000355839 HNRNPUL2Q1KMD3 747 aaKnown RBP15.47■□□□□ 0.07
MMS19-202ENST00000355839 DIEXFQ68CQ4 756 aaKnown RBP15.45■□□□□ 0.06
MMS19-202ENST00000355839 YTHDC1Q96MU7 727 aaKnown RBP15.44■□□□□ 0.06
MMS19-202ENST00000355839 ARAP1Q96P48 1450 aa15.41■□□□□ 0.06
MMS19-202ENST00000355839 CENPBP07199 599 aaPredicted RBP15.41■□□□□ 0.06
MMS19-202ENST00000355839 VPS8Q8N3P4 1428 aa15.38■□□□□ 0.05
MMS19-202ENST00000355839 WDR97A6NE52 1622 aa15.36■□□□□ 0.05
MMS19-202ENST00000355839 CADPSQ9ULU8 1353 aa15.33■□□□□ 0.05
MMS19-202ENST00000355839 APLP2Q06481 763 aa15.3■□□□□ 0.04
MMS19-202ENST00000355839 FGD5Q6ZNL6 1462 aa15.27■□□□□ 0.04
MMS19-202ENST00000355839 ARHGAP35Q9NRY4 1499 aa15.26■□□□□ 0.03
MMS19-202ENST00000355839 KANK4Q5T7N3 995 aaPredicted RBP15.25■□□□□ 0.03
MMS19-202ENST00000355839 IGF1RP08069 1367 aa15.25■□□□□ 0.03
MMS19-202ENST00000355839 ZNF316A6NFI3 1004 aaPredicted RBP15.25■□□□□ 0.03
MMS19-202ENST00000355839 NESP48681 1621 aa15.25■□□□□ 0.03
MMS19-202ENST00000355839 DNMBPQ6XZF7 1577 aa15.24■□□□□ 0.03
MMS19-202ENST00000355839 KIF27Q86VH2 1401 aa15.23■□□□□ 0.03
MMS19-202ENST00000355839 FANCD2Q9BXW9 1451 aa15.2■□□□□ 0.02
MMS19-202ENST00000355839 TOPBP1Q92547 1522 aa15.18■□□□□ 0.02
MMS19-202ENST00000355839 ABCA10Q8WWZ4 1543 aa15.18■□□□□ 0.02
MMS19-202ENST00000355839 URB2Q14146 1524 aaKnown RBP15.17■□□□□ 0.02
MMS19-202ENST00000355839 POLA1P09884 1462 aaPredicted RBP15.16■□□□□ 0.02
MMS19-202ENST00000355839 ABCA5Q8WWZ7 1642 aa15.16■□□□□ 0.02
MMS19-202ENST00000355839 LAMC3Q9Y6N6 1575 aa15.16■□□□□ 0.02
MMS19-202ENST00000355839 LRRIQ1Q96JM4 1722 aa15.16■□□□□ 0.02
MMS19-202ENST00000355839 KIF21AQ7Z4S6 1674 aa15.16■□□□□ 0.02
MMS19-202ENST00000355839 CUX2O14529 1486 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms