Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.24■□□□□ 0.35
RFPL1O75677 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFPL1O75677 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFPL1O75677 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.24■□□□□ 0.35
RFPL1O75677 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
RFPL1O75677 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.24■□□□□ 0.35
RFPL1O75677 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
RFPL1O75677 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFPL1O75677 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFPL1O75677 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFPL1O75677 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.24■□□□□ 0.35
RFPL1O75677 AP000347.1-202ENST00000435868 847 ntBASIC17.24■□□□□ 0.35
RFPL1O75677 AC009078.2-202ENST00000463353 338 ntBASIC17.24■□□□□ 0.35
RFPL1O75677 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.24■□□□□ 0.35
RFPL1O75677 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.24■□□□□ 0.35
RFPL1O75677 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFPL1O75677 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFPL1O75677 AL353801.3-201ENST00000609898 542 ntBASIC17.24■□□□□ 0.35
RFPL1O75677 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
RFPL1O75677 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFPL1O75677 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
RFPL1O75677 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
RFPL1O75677 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.24■□□□□ 0.35
RFPL1O75677 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.24■□□□□ 0.35
RFPL1O75677 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RFPL1O75677 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFPL1O75677 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFPL1O75677 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.24■□□□□ 0.35
RFPL1O75677 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.24■□□□□ 0.35
RFPL1O75677 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
RFPL1O75677 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RFPL1O75677 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFPL1O75677 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.23■□□□□ 0.35
RFPL1O75677 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.23■□□□□ 0.35
RFPL1O75677 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RFPL1O75677 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFPL1O75677 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.23■□□□□ 0.35
RFPL1O75677 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFPL1O75677 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFPL1O75677 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFPL1O75677 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.23■□□□□ 0.35
RFPL1O75677 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFPL1O75677 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFPL1O75677 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFPL1O75677 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFPL1O75677 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFPL1O75677 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.23■□□□□ 0.35
RFPL1O75677 KRT18P31-201ENST00000506277 1292 ntBASIC17.23■□□□□ 0.35
RFPL1O75677 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.23■□□□□ 0.35
RFPL1O75677 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.23■□□□□ 0.35
RFPL1O75677 AL160237.2-201ENST00000556165 472 ntBASIC17.23■□□□□ 0.35
RFPL1O75677 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.23■□□□□ 0.35
RFPL1O75677 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.23■□□□□ 0.35
RFPL1O75677 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.23■□□□□ 0.35
RFPL1O75677 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
RFPL1O75677 AC090616.6-201ENST00000582640 721 ntBASIC17.23■□□□□ 0.35
RFPL1O75677 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.23■□□□□ 0.35
RFPL1O75677 STK25P1-201ENST00000585406 838 ntBASIC17.23■□□□□ 0.35
RFPL1O75677 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.23■□□□□ 0.35
RFPL1O75677 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.23■□□□□ 0.35
RFPL1O75677 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.23■□□□□ 0.35
RFPL1O75677 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFPL1O75677 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.23■□□□□ 0.35
RFPL1O75677 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFPL1O75677 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFPL1O75677 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RFPL1O75677 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFPL1O75677 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFPL1O75677 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
RFPL1O75677 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RFPL1O75677 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.22■□□□□ 0.35
RFPL1O75677 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFPL1O75677 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFPL1O75677 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFPL1O75677 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFPL1O75677 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFPL1O75677 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.22■□□□□ 0.35
RFPL1O75677 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.22■□□□□ 0.35
RFPL1O75677 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RFPL1O75677 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RFPL1O75677 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFPL1O75677 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFPL1O75677 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RFPL1O75677 RN7SL606P-201ENST00000472779 293 ntBASIC17.22■□□□□ 0.35
RFPL1O75677 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFPL1O75677 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFPL1O75677 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RFPL1O75677 AL138831.2-201ENST00000606564 490 ntBASIC17.22■□□□□ 0.35
RFPL1O75677 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.22■□□□□ 0.35
RFPL1O75677 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.22■□□□□ 0.35
RFPL1O75677 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFPL1O75677 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFPL1O75677 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFPL1O75677 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFPL1O75677 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFPL1O75677 FRMD8P1-201ENST00000440433 1524 ntBASIC17.21■□□□□ 0.35
RFPL1O75677 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFPL1O75677 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFPL1O75677 AC026691.1-201ENST00000602502 2017 ntBASIC17.21■□□□□ 0.35
RFPL1O75677 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms