Protein–RNA interactions for Protein: P0C7M3

SFTA3, Surfactant-associated protein 3, humanhuman

Predictions only

Length 94 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTA3P0C7M3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC13.8□□□□□ -0.2
SFTA3P0C7M3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC13.8□□□□□ -0.2
SFTA3P0C7M3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SFTA3P0C7M3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.8□□□□□ -0.2
SFTA3P0C7M3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC13.8□□□□□ -0.2
SFTA3P0C7M3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SFTA3P0C7M3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
SFTA3P0C7M3 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SFTA3P0C7M3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SFTA3P0C7M3 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SFTA3P0C7M3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SFTA3P0C7M3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SFTA3P0C7M3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SFTA3P0C7M3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
SFTA3P0C7M3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
SFTA3P0C7M3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 CICP4-201ENST00000447359 2812 ntBASIC13.79□□□□□ -0.2
SFTA3P0C7M3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 AC022532.1-201ENST00000624563 1728 ntBASIC13.79□□□□□ -0.2
SFTA3P0C7M3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 SNX18-202ENST00000343017 3140 ntBASIC13.79□□□□□ -0.2
SFTA3P0C7M3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 KRT17P3-201ENST00000420566 1262 ntBASIC13.79□□□□□ -0.2
SFTA3P0C7M3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 Six3os1_6.1-201ENST00000620790 196 ntBASIC13.79□□□□□ -0.2
SFTA3P0C7M3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC13.79□□□□□ -0.2
SFTA3P0C7M3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SFTA3P0C7M3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SFTA3P0C7M3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
SFTA3P0C7M3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SFTA3P0C7M3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SFTA3P0C7M3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SFTA3P0C7M3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.78□□□□□ -0.2
SFTA3P0C7M3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SFTA3P0C7M3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.78□□□□□ -0.2
SFTA3P0C7M3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SFTA3P0C7M3 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
SFTA3P0C7M3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SFTA3P0C7M3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.78□□□□□ -0.2
SFTA3P0C7M3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.78□□□□□ -0.2
SFTA3P0C7M3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.78□□□□□ -0.2
SFTA3P0C7M3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.78□□□□□ -0.2
SFTA3P0C7M3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SFTA3P0C7M3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SFTA3P0C7M3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SFTA3P0C7M3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SFTA3P0C7M3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SFTA3P0C7M3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC13.78□□□□□ -0.2
SFTA3P0C7M3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SFTA3P0C7M3 AC026366.1-201ENST00000488803 879 ntBASIC13.78□□□□□ -0.2
SFTA3P0C7M3 AC233263.1-201ENST00000578059 224 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms