Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC6A20Q9NP91 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SLC6A20Q9NP91 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.52■□□□□ 0.24
SLC6A20Q9NP91 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.52■□□□□ 0.24
SLC6A20Q9NP91 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC6A20Q9NP91 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.52■□□□□ 0.24
SLC6A20Q9NP91 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC6A20Q9NP91 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SLC6A20Q9NP91 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SLC6A20Q9NP91 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.52■□□□□ 0.23
SLC6A20Q9NP91 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
SLC6A20Q9NP91 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SLC6A20Q9NP91 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC6A20Q9NP91 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SLC6A20Q9NP91 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC6A20Q9NP91 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC6A20Q9NP91 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC6A20Q9NP91 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SLC6A20Q9NP91 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC6A20Q9NP91 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SLC6A20Q9NP91 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
SLC6A20Q9NP91 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 RPL13AP23-201ENST00000480739 586 ntBASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 IGHV3-22-201ENST00000520721 359 ntBASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 AC106730.1-201ENST00000566722 1090 ntBASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A20Q9NP91 LINC02012-201ENST00000608206 1725 ntBASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 AC005593.1-201ENST00000624894 515 ntBASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SLC6A20Q9NP91 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A20Q9NP91 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.49■□□□□ 0.23
SLC6A20Q9NP91 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A20Q9NP91 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC6A20Q9NP91 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A20Q9NP91 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC6A20Q9NP91 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A20Q9NP91 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms