Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 SUGP1-210ENST00000589144 2066 ntTSL 1 (best)16.45■□□□□ 0.225e-6■■□□□ 11.9
CSTF2TQ9H0L4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.155e-6■■□□□ 11.9
CSTF2TQ9H0L4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.125e-6■■□□□ 11.9
CSTF2TQ9H0L4 SFT2D1-202ENST00000478705 659 ntTSL 215.56■□□□□ 0.085e-6■■□□□ 11.9
CSTF2TQ9H0L4 SUGP1-204ENST00000585763 826 ntTSL 515.2■□□□□ 0.025e-6■■□□□ 11.9
CSTF2TQ9H0L4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.025e-6■■□□□ 11.9
CSTF2TQ9H0L4 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.025e-11■■□□□ 11.9
CSTF2TQ9H0L4 SUGP1-206ENST00000587119 2177 ntTSL 214.7□□□□□ -0.065e-6■■□□□ 11.9
CSTF2TQ9H0L4 SUGP1-209ENST00000588731 2282 ntTSL 1 (best)14.18□□□□□ -0.145e-6■■□□□ 11.9
CSTF2TQ9H0L4 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.88□□□□□ -0.195e-11■■□□□ 11.9
CSTF2TQ9H0L4 FLCN-207ENST00000466317 2684 ntTSL 213.7□□□□□ -0.225e-6■■□□□ 11.9
CSTF2TQ9H0L4 FAM118A-211ENST00000477714 756 ntTSL 212.9□□□□□ -0.345e-6■■□□□ 11.9
CSTF2TQ9H0L4 SUGP1-212ENST00000591007 1377 ntTSL 1 (best)12.29□□□□□ -0.445e-6■■□□□ 11.9
CSTF2TQ9H0L4 SUGP1-205ENST00000586387 626 ntTSL 312.19□□□□□ -0.465e-6■■□□□ 11.9
CSTF2TQ9H0L4 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.545e-6■■□□□ 11.9
CSTF2TQ9H0L4 FLCN-201ENST00000285071 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.555e-6■■□□□ 11.9
CSTF2TQ9H0L4 SFT2D1-204ENST00000487841 2576 ntTSL 1 (best)11.51□□□□□ -0.575e-6■■□□□ 11.9
CSTF2TQ9H0L4 SUGP1-201ENST00000247001 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.575e-6■■□□□ 11.9
CSTF2TQ9H0L4 REEP5-206ENST00000511865 1187 ntTSL 211.01□□□□□ -0.652e-8■■□□□ 11.9
CSTF2TQ9H0L4 LUC7L3-208ENST00000505658 7040 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.865e-6■■□□□ 11.9
CSTF2TQ9H0L4 PIP4K2A-203ENST00000422321 768 ntTSL 38.61□□□□□ -1.035e-6■■□□□ 11.9
CSTF2TQ9H0L4 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.385e-11■■□□□ 11.9
CSTF2TQ9H0L4 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC6.12□□□□□ -1.432e-8■■□□□ 11.9
CSTF2TQ9H0L4 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.595e-11■■□□□ 11.9
CSTF2TQ9H0L4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.21□□□□□ -1.745e-6■■□□□ 11.9
CSTF2TQ9H0L4 ARID3A-204ENST00000585895 377 ntTSL 224.08■■□□□ 1.453e-7■■□□□ 11.9
CSTF2TQ9H0L4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.57□□□□□ -0.242e-6■■□□□ 11.8
CSTF2TQ9H0L4 C1QTNF1-AS1-201ENST00000577521 583 ntTSL 411.81□□□□□ -0.522e-6■■□□□ 11.8
CSTF2TQ9H0L4 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.53□□□□□ -0.242e-7■■□□□ 11.8
CSTF2TQ9H0L4 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13□□□□□ -0.332e-7■■□□□ 11.8
CSTF2TQ9H0L4 MAP2K3-209ENST00000526076 575 ntTSL 49.21□□□□□ -0.942e-7■■□□□ 11.8
CSTF2TQ9H0L4 SPIN1-202ENST00000462844 599 ntTSL 219.86■□□□□ 0.771e-7■■□□□ 11.8
CSTF2TQ9H0L4 SPIN1-203ENST00000469017 2082 ntTSL 218.45■□□□□ 0.541e-7■■□□□ 11.8
CSTF2TQ9H0L4 SPIN1-206ENST00000485804 814 ntTSL 318.05■□□□□ 0.481e-7■■□□□ 11.8
CSTF2TQ9H0L4 SPIN1-205ENST00000485565 706 ntTSL 316.91■□□□□ 0.31e-7■■□□□ 11.8
CSTF2TQ9H0L4 SPIN1-201ENST00000375859 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.631e-7■■□□□ 11.8
CSTF2TQ9H0L4 UBE2I-209ENST00000562470 433 ntTSL 213.49□□□□□ -0.253e-6■■□□□ 11.8
CSTF2TQ9H0L4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.44■□□□□ 0.064e-6■■□□□ 11.8
CSTF2TQ9H0L4 PTPRG-205ENST00000475527 2694 ntTSL 519.12■□□□□ 0.655e-7■■□□□ 11.8
CSTF2TQ9H0L4 PTPRG-207ENST00000495879 3011 ntTSL 1 (best)17.49■□□□□ 0.395e-7■■□□□ 11.8
CSTF2TQ9H0L4 BLCAP-207ENST00000414080 581 ntTSL 320.73■□□□□ 0.917e-9■■□□□ 11.8
CSTF2TQ9H0L4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.577e-9■■□□□ 11.8
CSTF2TQ9H0L4 BLCAP-210ENST00000445723 588 ntTSL 417.44■□□□□ 0.387e-9■■□□□ 11.8
CSTF2TQ9H0L4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.27e-9■■□□□ 11.8
CSTF2TQ9H0L4 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.37e-9■■□□□ 11.8
CSTF2TQ9H0L4 AL109615.3-201ENST00000422059 2232 ntTSL 2 BASIC9.01□□□□□ -0.975e-6■■□□□ 11.8
CSTF2TQ9H0L4 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC8.63□□□□□ -1.031e-7■■□□□ 11.8
CSTF2TQ9H0L4 ANKRD28-203ENST00000439830 592 ntTSL 523.84■■□□□ 1.412e-7■■□□□ 11.8
CSTF2TQ9H0L4 ANKRD28-202ENST00000412318 4408 ntTSL 24.22□□□□□ -1.732e-7■■□□□ 11.8
CSTF2TQ9H0L4 FAM20C-202ENST00000471328 554 ntTSL 317.44■□□□□ 0.382e-11■■□□□ 11.8
CSTF2TQ9H0L4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.19■■□□□ 1.469e-9■■□□□ 11.8
CSTF2TQ9H0L4 CCDC61-206ENST00000596687 800 ntTSL 523.55■■□□□ 1.369e-9■■□□□ 11.8
CSTF2TQ9H0L4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.29e-9■■□□□ 11.8
CSTF2TQ9H0L4 CCDC61-205ENST00000596161 574 ntTSL 418.59■□□□□ 0.579e-9■■□□□ 11.8
CSTF2TQ9H0L4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.279e-9■■□□□ 11.8
CSTF2TQ9H0L4 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.029e-9■■□□□ 11.8
CSTF2TQ9H0L4 CCDC61-203ENST00000594672 433 ntAPPRIS ALT2 TSL 313.17□□□□□ -0.39e-9■■□□□ 11.8
CSTF2TQ9H0L4 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.44□□□□□ -0.267e-42■■□□□ 11.8
CSTF2TQ9H0L4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.47■□□□□ 0.233e-9■■□□□ 11.8
CSTF2TQ9H0L4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.143e-9■■□□□ 11.8
CSTF2TQ9H0L4 PABPC1L-211ENST00000476056 1214 ntTSL 511.05□□□□□ -0.643e-9■■□□□ 11.8
CSTF2TQ9H0L4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.06■□□□□ 0.488e-7■■□□□ 11.8
CSTF2TQ9H0L4 SARDH-206ENST00000427237 1957 ntTSL 216.31■□□□□ 0.28e-7■■□□□ 11.8
CSTF2TQ9H0L4 TULP4-207ENST00000620026 680 ntTSL 419.96■□□□□ 0.799e-10■■□□□ 11.8
CSTF2TQ9H0L4 RBM14-207ENST00000461478 693 ntTSL 219.81■□□□□ 0.761e-10■■□□□ 11.8
CSTF2TQ9H0L4 RBM14-206ENST00000460762 459 ntTSL 219.14■□□□□ 0.651e-10■■□□□ 11.8
CSTF2TQ9H0L4 RBM14-209ENST00000512283 567 ntTSL 417.26■□□□□ 0.351e-10■■□□□ 11.8
CSTF2TQ9H0L4 RBM14-205ENST00000443702 732 ntTSL 3 BASIC12.32□□□□□ -0.441e-10■■□□□ 11.8
CSTF2TQ9H0L4 RBM14-203ENST00000409372 876 ntTSL 2 BASIC11.46□□□□□ -0.571e-10■■□□□ 11.8
CSTF2TQ9H0L4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.056e-7■■□□□ 11.8
CSTF2TQ9H0L4 HS3ST3B1-202ENST00000466596 2808 ntTSL 214.14□□□□□ -0.156e-7■■□□□ 11.8
CSTF2TQ9H0L4 PRSS53-202ENST00000486499 5489 ntTSL 214.29□□□□□ -0.129e-7■■□□□ 11.8
CSTF2TQ9H0L4 VEGFA-217ENST00000518538 535 ntTSL 220.44■□□□□ 0.862e-10■■□□□ 11.8
CSTF2TQ9H0L4 VEGFA-216ENST00000512683 475 ntTSL 1 (best)11.94□□□□□ -0.52e-10■■□□□ 11.8
CSTF2TQ9H0L4 MAP2K3-213ENST00000583508 607 ntTSL 516.7■□□□□ 0.269e-7■■□□□ 11.8
CSTF2TQ9H0L4 MAP2K3-206ENST00000479129 574 ntTSL 316.7■□□□□ 0.269e-7■■□□□ 11.8
CSTF2TQ9H0L4 MAP2K3-207ENST00000483928 511 ntTSL 516.7■□□□□ 0.269e-7■■□□□ 11.8
CSTF2TQ9H0L4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.139e-7■■□□□ 11.8
CSTF2TQ9H0L4 MAP2K3-208ENST00000496046 2089 ntTSL 511.93□□□□□ -0.59e-7■■□□□ 11.8
CSTF2TQ9H0L4 MAP2K3-204ENST00000395491 2401 ntTSL 211.23□□□□□ -0.619e-7■■□□□ 11.8
CSTF2TQ9H0L4 FN3K-204ENST00000573841 513 ntTSL 218.35■□□□□ 0.537e-10■■□□□ 11.8
CSTF2TQ9H0L4 FN3K-202ENST00000570734 2515 ntTSL 514.28□□□□□ -0.127e-10■■□□□ 11.8
CSTF2TQ9H0L4 ACSL4-206ENST00000502391 802 ntTSL 319.37■□□□□ 0.694e-8■■□□□ 11.8
CSTF2TQ9H0L4 ACSL4-211ENST00000508092 637 ntTSL 417.37■□□□□ 0.374e-8■■□□□ 11.8
CSTF2TQ9H0L4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.174e-8■■□□□ 11.8
CSTF2TQ9H0L4 ACSL4-208ENST00000504980 573 ntTSL 416.02■□□□□ 0.164e-8■■□□□ 11.8
CSTF2TQ9H0L4 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.414e-8■■□□□ 11.8
CSTF2TQ9H0L4 ACSL4-205ENST00000469857 506 ntTSL 1 (best)10.54□□□□□ -0.724e-8■■□□□ 11.8
CSTF2TQ9H0L4 ACSL4-207ENST00000504383 683 ntTSL 27.8□□□□□ -1.164e-8■■□□□ 11.8
CSTF2TQ9H0L4 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7□□□□□ -1.294e-8■■□□□ 11.8
CSTF2TQ9H0L4 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.93■□□□□ 0.942e-9■■□□□ 11.8
CSTF2TQ9H0L4 SF1-221ENST00000633899 591 ntTSL 419.54■□□□□ 0.722e-9■■□□□ 11.8
CSTF2TQ9H0L4 SF1-213ENST00000472725 632 ntTSL 318.46■□□□□ 0.552e-9■■□□□ 11.8
CSTF2TQ9H0L4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.242e-9■■□□□ 11.8
CSTF2TQ9H0L4 SF1-212ENST00000463343 983 ntTSL 216.42■□□□□ 0.222e-9■■□□□ 11.8
CSTF2TQ9H0L4 SF1-207ENST00000413951 623 ntTSL 215.82■□□□□ 0.122e-9■■□□□ 11.8
CSTF2TQ9H0L4 SF1-215ENST00000482693 755 ntTSL 215.54■□□□□ 0.082e-9■■□□□ 11.8
CSTF2TQ9H0L4 SF1-208ENST00000432725 475 ntTSL 414.47□□□□□ -0.092e-9■■□□□ 11.8
CSTF2TQ9H0L4 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.242e-9■■□□□ 11.8
CSTF2TQ9H0L4 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.42□□□□□ -0.262e-9■■□□□ 11.8
Retrieved 100 of 19,151 protein–RNA pairs in 202.2 ms