RNA–Protein interactions for RNA: ENST00000596161.5

CCDC61-205, Transcript of coiled-coil domain containing 61, humanhuman

TSL 4

Gene CCDC61, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-205ENST00000596161 NISCHQ9Y2I1 1504 aa48.12■■■■■ 5.29
CCDC61-205ENST00000596161 CCDC180Q9P1Z9 1646 aa42.69■■■■■ 4.42
CCDC61-205ENST00000596161 ABCC9O60706 1549 aa41.45■■■■■ 4.23
CCDC61-205ENST00000596161 ZCCHC6Q5VYS8 1495 aaKnown RBP40.14■■■■■ 4.02
CCDC61-205ENST00000596161 DCAF8L2P0C7V8 631 aa40.07■■■■■ 4.01
CCDC61-205ENST00000596161 NACADO15069 1562 aa40.06■■■■■ 4
CCDC61-205ENST00000596161 RB1CC1Q8TDY2 1594 aa40.06■■■■■ 4
CCDC61-205ENST00000596161 MYO15BQ96JP2 1530 aa39.93■■■■□ 3.98
CCDC61-205ENST00000596161 DCAF1Q9Y4B6 1507 aa39.86■■■■□ 3.97
CCDC61-205ENST00000596161 UNC13AQ9UPW8 1703 aa39.05■■■■□ 3.84
CCDC61-205ENST00000596161 SCRIBQ14160 1630 aa38.92■■■■□ 3.82
CCDC61-205ENST00000596161 BICRAQ9NZM4 1560 aa38.75■■■■□ 3.79
CCDC61-205ENST00000596161 PABPN1Q86U42 306 aaKnown RBP eCLIP38.75■■■■□ 3.79
CCDC61-205ENST00000596161 SHROOM4Q9ULL8 1493 aa38.49■■■■□ 3.75
CCDC61-205ENST00000596161 EIF4G1Q04637 1599 aaKnown RBP37.74■■■■□ 3.63
CCDC61-205ENST00000596161 DNAJC5BQ9UF47 199 aa37.71■■■■□ 3.63
CCDC61-205ENST00000596161 CC2D2AQ9P2K1 1620 aa37.5■■■■□ 3.59
CCDC61-205ENST00000596161 CECR2Q9BXF3 1484 aa37.4■■■■□ 3.58
CCDC61-205ENST00000596161 BAZ1AQ9NRL2 1556 aaPredicted RBP37.3■■■■□ 3.56
CCDC61-205ENST00000596161 SMARCA4P51532 1647 aa37.27■■■■□ 3.56
CCDC61-205ENST00000596161 MROH2BQ7Z745 1585 aa37.06■■■■□ 3.52
CCDC61-205ENST00000596161 SMARCA2P51531 1590 aa37.01■■■■□ 3.52
CCDC61-205ENST00000596161 ATAD2BQ9ULI0 1458 aa37■■■■□ 3.51
CCDC61-205ENST00000596161 NCAPD3P42695 1498 aa36.94■■■■□ 3.5
CCDC61-205ENST00000596161 PEG3Q9GZU2 1588 aa36.91■■■■□ 3.5
CCDC61-205ENST00000596161 HMGXB3Q12766 1538 aa36.81■■■■□ 3.48
CCDC61-205ENST00000596161 RSF1Q96T23 1441 aaPredicted RBP36.75■■■■□ 3.47
CCDC61-205ENST00000596161 BAZ1BQ9UIG0 1483 aaKnown RBP36.74■■■■□ 3.47
CCDC61-205ENST00000596161 WIZO95785 1651 aa36.66■■■■□ 3.46
CCDC61-205ENST00000596161 TOP2AP11388 1531 aaKnown RBP36.35■■■■□ 3.41
CCDC61-205ENST00000596161 SUPT5HO00267 1087 aaKnown RBP36.03■■■■□ 3.36
CCDC61-205ENST00000596161 LAMC3Q9Y6N6 1575 aa35.95■■■■□ 3.35
CCDC61-205ENST00000596161 NESP48681 1621 aa35.92■■■■□ 3.34
CCDC61-205ENST00000596161 CADPSQ9ULU8 1353 aa35.89■■■■□ 3.34
CCDC61-205ENST00000596161 CCDC88BA6NC98 1476 aa35.88■■■■□ 3.33
CCDC61-205ENST00000596161 ERCC6Q03468 1493 aa35.75■■■■□ 3.31
CCDC61-205ENST00000596161 CFTRP13569 1480 aa35.73■■■■□ 3.31
CCDC61-205ENST00000596161 PDS5BQ9NTI5 1447 aa35.71■■■■□ 3.31
CCDC61-205ENST00000596161 KIF21AQ7Z4S6 1674 aa35.52■■■■□ 3.28
CCDC61-205ENST00000596161 PRDM2Q13029 1718 aa35.49■■■■□ 3.27
CCDC61-205ENST00000596161 FANCD2Q9BXW9 1451 aa35.48■■■■□ 3.27
CCDC61-205ENST00000596161 CEP164Q9UPV0 1460 aa35.43■■■■□ 3.26
CCDC61-205ENST00000596161 THOC2Q8NI27 1593 aaKnown RBP35.35■■■■□ 3.25
CCDC61-205ENST00000596161 MRC2Q9UBG0 1479 aa35.31■■■■□ 3.24
CCDC61-205ENST00000596161 CUX2O14529 1486 aa35.29■■■■□ 3.24
CCDC61-205ENST00000596161 WDR62O43379 1518 aa35.16■■■■□ 3.22
CCDC61-205ENST00000596161 URB2Q14146 1524 aaKnown RBP35.08■■■■□ 3.21
CCDC61-205ENST00000596161 ABCC8Q09428 1581 aa35.01■■■■□ 3.2
CCDC61-205ENST00000596161 TOPBP1Q92547 1522 aa34.94■■■■□ 3.18
CCDC61-205ENST00000596161 DNMBPQ6XZF7 1577 aa34.94■■■■□ 3.18
CCDC61-205ENST00000596161 CUX1P39880 1505 aa34.76■■■■□ 3.15
CCDC61-205ENST00000596161 IFT140Q96RY7 1462 aa34.68■■■■□ 3.14
CCDC61-205ENST00000596161 WRNQ14191 1432 aaPredicted RBP eCLIP34.67■■■■□ 3.14
CCDC61-205ENST00000596161 POLA1P09884 1462 aaPredicted RBP34.65■■■■□ 3.14
CCDC61-205ENST00000596161 FGD5Q6ZNL6 1462 aa34.62■■■■□ 3.13
CCDC61-205ENST00000596161 TOP2BQ02880 1626 aa34.55■■■■□ 3.12
CCDC61-205ENST00000596161 BIVM-ERCC5R4GMW8 1640 aa34.55■■■■□ 3.12
CCDC61-205ENST00000596161 SYNJ1O43426 1573 aa34.53■■■■□ 3.12
CCDC61-205ENST00000596161 SOGA1O94964 1423 aa34.53■■■■□ 3.12
CCDC61-205ENST00000596161 TARBP1Q13395 1621 aaKnown RBP34.52■■■■□ 3.12
CCDC61-205ENST00000596161 RAD54L2Q9Y4B4 1467 aa34.47■■■■□ 3.11
CCDC61-205ENST00000596161 ZNF608Q9ULD9 1512 aaPredicted RBP34.43■■■■□ 3.1
CCDC61-205ENST00000596161 EIF4G3O43432 1585 aaKnown RBP34.35■■■■□ 3.09
CCDC61-205ENST00000596161 WDR97A6NE52 1622 aa34.33■■■■□ 3.09
CCDC61-205ENST00000596161 ABCA10Q8WWZ4 1543 aa34.3■■■■□ 3.08
CCDC61-205ENST00000596161 AQRO60306 1485 aaKnown RBP eCLIP34.28■■■■□ 3.083e-6■■■□□ 17.5
CCDC61-205ENST00000596161 TDRD9Q8NDG6 1382 aaKnown RBP34.27■■■■□ 3.08
CCDC61-205ENST00000596161 GAPVD1Q14C86 1478 aa34.14■■■■□ 3.06
CCDC61-205ENST00000596161 ABCA5Q8WWZ7 1642 aa34.13■■■■□ 3.05
CCDC61-205ENST00000596161 GRIN2BQ13224 1484 aa34.12■■■■□ 3.05
CCDC61-205ENST00000596161 TRIM41Q8WV44 630 aa34.05■■■■□ 3.04
CCDC61-205ENST00000596161 PBRM1Q86U86 1689 aa34.03■■■■□ 3.04
CCDC61-205ENST00000596161 SNAPC4Q5SXM2 1469 aa34.01■■■■□ 3.03
CCDC61-205ENST00000596161 MAGI1Q96QZ7 1491 aaPredicted RBP34■■■■□ 3.03
CCDC61-205ENST00000596161 KIF27Q86VH2 1401 aa33.95■■■■□ 3.02
CCDC61-205ENST00000596161 ERICH3Q5RHP9 1530 aa33.92■■■■□ 3.02
CCDC61-205ENST00000596161 SYNJ2O15056 1496 aa33.85■■■■□ 3.01
CCDC61-205ENST00000596161 FBLN2P98095 1184 aa33.85■■■■□ 3.01
CCDC61-205ENST00000596161 OSCARQ8IYS5 282 aa33.85■■■■□ 3.01
CCDC61-205ENST00000596161 CHD1O14646 1710 aa33.84■■■■□ 3.01
CCDC61-205ENST00000596161 CHMP7Q8WUX9 453 aaPredicted RBP33.82■■■■□ 3
CCDC61-205ENST00000596161 DNAJC5Q9H3Z4 198 aa33.82■■■■□ 3
CCDC61-205ENST00000596161 ADAMTS12P58397 1594 aa33.8■■■■□ 3
CCDC61-205ENST00000596161 CHIC1Q5VXU3 224 aa33.78■■■■□ 3
CCDC61-205ENST00000596161 FHAD1B1AJZ9 1412 aa33.78■■■■□ 3
CCDC61-205ENST00000596161 IGF1RP08069 1367 aa33.72■■■□□ 2.99
CCDC61-205ENST00000596161 CUL7Q14999 1698 aa33.68■■■□□ 2.98
CCDC61-205ENST00000596161 GRIN2AQ12879 1464 aa33.66■■■□□ 2.98
CCDC61-205ENST00000596161 RUSC2Q8N2Y8 1516 aa33.63■■■□□ 2.97
CCDC61-205ENST00000596161 CARMIL1Q5VZK9 1371 aa33.56■■■□□ 2.96
CCDC61-205ENST00000596161 EEA1Q15075 1411 aa33.52■■■□□ 2.96
CCDC61-205ENST00000596161 CLASP1Q7Z460 1538 aa33.49■■■□□ 2.95
CCDC61-205ENST00000596161 NUP160Q12769 1436 aa33.49■■■□□ 2.95
CCDC61-205ENST00000596161 CEP170Q5SW79 1584 aa33.45■■■□□ 2.95
CCDC61-205ENST00000596161 RAPGEF2Q9Y4G8 1499 aa33.4■■■□□ 2.94
CCDC61-205ENST00000596161 CSRNP3Q8WYN3 585 aa33.38■■■□□ 2.93
CCDC61-205ENST00000596161 PRXQ9BXM0 1461 aa33.33■■■□□ 2.93
CCDC61-205ENST00000596161 FAM9AQ8IZU1 332 aaPredicted RBP33.29■■■□□ 2.92
CCDC61-205ENST00000596161 ARHGEF11O15085 1522 aa33.28■■■□□ 2.92
CCDC61-205ENST00000596161 KIAA0586Q9BVV6 1533 aa33.26■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms