RNA–Protein interactions for RNA: ENST00000422321.5

PIP4K2A-203, Transcript of phosphatidylinositol-5-phosphate 4-kinase type 2 alpha, humanhuman

TSL 3

Gene PIP4K2A, Length 768 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIP4K2A-203ENST00000422321 AEBP2Q6ZN18 517 aaPredicted RBP24.03■■□□□ 1.44
PIP4K2A-203ENST00000422321 CHIC1Q5VXU3 224 aa23.44■■□□□ 1.34
PIP4K2A-203ENST00000422321 NISCHQ9Y2I1 1504 aa22.27■■□□□ 1.16
PIP4K2A-203ENST00000422321 PHF23Q9BUL5 403 aaPredicted RBP20.71■□□□□ 0.91
PIP4K2A-203ENST00000422321 SENP3Q9H4L4 574 aaPredicted RBP20.22■□□□□ 0.83
PIP4K2A-203ENST00000422321 CCDC180Q9P1Z9 1646 aa19.72■□□□□ 0.75
PIP4K2A-203ENST00000422321 PLPPR3Q6T4P5 718 aa19■□□□□ 0.63
PIP4K2A-203ENST00000422321 FOXD1Q16676 465 aa18.86■□□□□ 0.61
PIP4K2A-203ENST00000422321 ABCC9O60706 1549 aa18.81■□□□□ 0.6
PIP4K2A-203ENST00000422321 ZCCHC6Q5VYS8 1495 aaKnown RBP18.61■□□□□ 0.57
PIP4K2A-203ENST00000422321 MYO15BQ96JP2 1530 aa18.56■□□□□ 0.56
PIP4K2A-203ENST00000422321 DCAF1Q9Y4B6 1507 aa18.56■□□□□ 0.56
PIP4K2A-203ENST00000422321 NACADO15069 1562 aa18.47■□□□□ 0.55
PIP4K2A-203ENST00000422321 RB1CC1Q8TDY2 1594 aa18.38■□□□□ 0.53
PIP4K2A-203ENST00000422321 DCAF8L2P0C7V8 631 aa18.34■□□□□ 0.53
PIP4K2A-203ENST00000422321 PPP6R1Q9UPN7 881 aa18.25■□□□□ 0.51
PIP4K2A-203ENST00000422321 ADRA2BP18089 450 aa18.2■□□□□ 0.5
PIP4K2A-203ENST00000422321 UNC13AQ9UPW8 1703 aa17.88■□□□□ 0.45
PIP4K2A-203ENST00000422321 SCRIBQ14160 1630 aa17.83■□□□□ 0.45
PIP4K2A-203ENST00000422321 SHROOM4Q9ULL8 1493 aa17.78■□□□□ 0.44
PIP4K2A-203ENST00000422321 BICRAQ9NZM4 1560 aa17.75■□□□□ 0.43
PIP4K2A-203ENST00000422321 PIAS4Q8N2W9 510 aaPredicted RBP17.73■□□□□ 0.43
PIP4K2A-203ENST00000422321 PABPN1Q86U42 306 aaKnown RBP eCLIP17.61■□□□□ 0.41
PIP4K2A-203ENST00000422321 EIF4G1Q04637 1599 aaKnown RBP17.27■□□□□ 0.35
PIP4K2A-203ENST00000422321 BAZ1AQ9NRL2 1556 aaPredicted RBP17.27■□□□□ 0.35
PIP4K2A-203ENST00000422321 MSH5O43196 834 aa17.24■□□□□ 0.35
PIP4K2A-203ENST00000422321 CECR2Q9BXF3 1484 aa17.23■□□□□ 0.35
PIP4K2A-203ENST00000422321 SMARCA4P51532 1647 aa17.19■□□□□ 0.34
PIP4K2A-203ENST00000422321 PEG3Q9GZU2 1588 aa17.11■□□□□ 0.33
PIP4K2A-203ENST00000422321 MROH2BQ7Z745 1585 aa17.11■□□□□ 0.33
PIP4K2A-203ENST00000422321 CC2D2AQ9P2K1 1620 aa17.1■□□□□ 0.33
PIP4K2A-203ENST00000422321 SMARCA2P51531 1590 aa17.08■□□□□ 0.32
PIP4K2A-203ENST00000422321 RSF1Q96T23 1441 aaPredicted RBP17.06■□□□□ 0.32
PIP4K2A-203ENST00000422321 NCAPD3P42695 1498 aa17.05■□□□□ 0.32
PIP4K2A-203ENST00000422321 ATAD2BQ9ULI0 1458 aa17.03■□□□□ 0.32
PIP4K2A-203ENST00000422321 DNAJC5BQ9UF47 199 aa16.99■□□□□ 0.31
PIP4K2A-203ENST00000422321 HMGXB3Q12766 1538 aa16.97■□□□□ 0.31
PIP4K2A-203ENST00000422321 WIZO95785 1651 aa16.91■□□□□ 0.3
PIP4K2A-203ENST00000422321 BAZ1BQ9UIG0 1483 aaKnown RBP16.89■□□□□ 0.29
PIP4K2A-203ENST00000422321 TOP2AP11388 1531 aaKnown RBP16.82■□□□□ 0.28
PIP4K2A-203ENST00000422321 PPP4R3CPQ6ZMV5 832 aa16.8■□□□□ 0.28
PIP4K2A-203ENST00000422321 SUPT5HO00267 1087 aaKnown RBP16.75■□□□□ 0.27
PIP4K2A-203ENST00000422321 CCDC88BA6NC98 1476 aa16.6■□□□□ 0.25
PIP4K2A-203ENST00000422321 KCNA4P22459 653 aa16.54■□□□□ 0.24
PIP4K2A-203ENST00000422321 CADPSQ9ULU8 1353 aa16.53■□□□□ 0.24
PIP4K2A-203ENST00000422321 LAMC3Q9Y6N6 1575 aa16.53■□□□□ 0.24
PIP4K2A-203ENST00000422321 MAPK8IP2Q13387 824 aaPredicted RBP16.53■□□□□ 0.24
PIP4K2A-203ENST00000422321 CFTRP13569 1480 aa16.5■□□□□ 0.23
PIP4K2A-203ENST00000422321 SCAF1Q9H7N4 1312 aaKnown RBP16.47■□□□□ 0.23
PIP4K2A-203ENST00000422321 PDS5BQ9NTI5 1447 aa16.41■□□□□ 0.22
PIP4K2A-203ENST00000422321 PRDM2Q13029 1718 aa16.39■□□□□ 0.21
PIP4K2A-203ENST00000422321 NESP48681 1621 aa16.37■□□□□ 0.21
PIP4K2A-203ENST00000422321 FANCD2Q9BXW9 1451 aa16.29■□□□□ 0.2
PIP4K2A-203ENST00000422321 NCBP3Q53F19 620 aaKnown RBP16.27■□□□□ 0.2
PIP4K2A-203ENST00000422321 CNKSR2Q8WXI2 1034 aa16.27■□□□□ 0.2
PIP4K2A-203ENST00000422321 CEP164Q9UPV0 1460 aa16.25■□□□□ 0.19
PIP4K2A-203ENST00000422321 ERCC6Q03468 1493 aa16.23■□□□□ 0.19
PIP4K2A-203ENST00000422321 ABCC8Q09428 1581 aa16.21■□□□□ 0.19
PIP4K2A-203ENST00000422321 KIF21AQ7Z4S6 1674 aa16.21■□□□□ 0.19
PIP4K2A-203ENST00000422321 DMRT2Q9Y5R5 561 aa16.2■□□□□ 0.18
PIP4K2A-203ENST00000422321 NPM3O75607 178 aaKnown RBP16.17■□□□□ 0.18
PIP4K2A-203ENST00000422321 MRC2Q9UBG0 1479 aa16.16■□□□□ 0.18
PIP4K2A-203ENST00000422321 WDR62O43379 1518 aa16.12■□□□□ 0.17
PIP4K2A-203ENST00000422321 THOC2Q8NI27 1593 aaKnown RBP16.12■□□□□ 0.17
PIP4K2A-203ENST00000422321 WRNQ14191 1432 aaPredicted RBP eCLIP16.09■□□□□ 0.17
PIP4K2A-203ENST00000422321 DNMBPQ6XZF7 1577 aa16.09■□□□□ 0.17
PIP4K2A-203ENST00000422321 URB2Q14146 1524 aaKnown RBP16.08■□□□□ 0.16
PIP4K2A-203ENST00000422321 TOPBP1Q92547 1522 aa16.06■□□□□ 0.16
PIP4K2A-203ENST00000422321 CUX2O14529 1486 aa16.06■□□□□ 0.16
PIP4K2A-203ENST00000422321 TOP2BQ02880 1626 aa16.03■□□□□ 0.16
PIP4K2A-203ENST00000422321 CUX1P39880 1505 aa16.03■□□□□ 0.16
PIP4K2A-203ENST00000422321 BIVM-ERCC5R4GMW8 1640 aa16.02■□□□□ 0.16
PIP4K2A-203ENST00000422321 SYNJ1O43426 1573 aa15.96■□□□□ 0.14
PIP4K2A-203ENST00000422321 RNF216Q9NWF9 866 aaPredicted RBP15.95■□□□□ 0.14
PIP4K2A-203ENST00000422321 POLA1P09884 1462 aaPredicted RBP15.95■□□□□ 0.14
PIP4K2A-203ENST00000422321 FGD5Q6ZNL6 1462 aa15.93■□□□□ 0.14
PIP4K2A-203ENST00000422321 IFT140Q96RY7 1462 aa15.93■□□□□ 0.14
PIP4K2A-203ENST00000422321 SOGA1O94964 1423 aa15.91■□□□□ 0.14
PIP4K2A-203ENST00000422321 HOXD11P31277 338 aaPredicted RBP15.9■□□□□ 0.14
PIP4K2A-203ENST00000422321 TRIM41Q8WV44 630 aa15.9■□□□□ 0.14
PIP4K2A-203ENST00000422321 WDR97A6NE52 1622 aa15.89■□□□□ 0.13
PIP4K2A-203ENST00000422321 TARBP1Q13395 1621 aaKnown RBP15.87■□□□□ 0.13
PIP4K2A-203ENST00000422321 ABCA10Q8WWZ4 1543 aa15.86■□□□□ 0.13
PIP4K2A-203ENST00000422321 RAD54L2Q9Y4B4 1467 aa15.81■□□□□ 0.12
PIP4K2A-203ENST00000422321 KIF27Q86VH2 1401 aa15.76■□□□□ 0.11
PIP4K2A-203ENST00000422321 ABCA5Q8WWZ7 1642 aa15.73■□□□□ 0.11
PIP4K2A-203ENST00000422321 EEA1Q15075 1411 aa15.73■□□□□ 0.11
PIP4K2A-203ENST00000422321 GAPVD1Q14C86 1478 aa15.72■□□□□ 0.11
PIP4K2A-203ENST00000422321 ZNF608Q9ULD9 1512 aaPredicted RBP15.72■□□□□ 0.11
PIP4K2A-203ENST00000422321 TDRD9Q8NDG6 1382 aaKnown RBP15.72■□□□□ 0.11
PIP4K2A-203ENST00000422321 GRIN2BQ13224 1484 aa15.71■□□□□ 0.1
PIP4K2A-203ENST00000422321 EIF4G3O43432 1585 aaKnown RBP15.7■□□□□ 0.1
PIP4K2A-203ENST00000422321 ERICH3Q5RHP9 1530 aa15.7■□□□□ 0.1
PIP4K2A-203ENST00000422321 POTEDQ86YR6 584 aa15.69■□□□□ 0.1
PIP4K2A-203ENST00000422321 SLC4A1APQ9BWU0 796 aaKnown RBP15.69■□□□□ 0.1
PIP4K2A-203ENST00000422321 AQRO60306 1485 aaKnown RBP eCLIP15.69■□□□□ 0.11e-6■■■■□ 23.3
PIP4K2A-203ENST00000422321 MAGI1Q96QZ7 1491 aaPredicted RBP15.65■□□□□ 0.1
PIP4K2A-203ENST00000422321 IGF1RP08069 1367 aa15.64■□□□□ 0.09
PIP4K2A-203ENST00000422321 PBRM1Q86U86 1689 aa15.63■□□□□ 0.09
PIP4K2A-203ENST00000422321 CUL7Q14999 1698 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms