RNA–Protein interactions for RNA: ENST00000471328.1

FAM20C-202, Transcript of FAM20C, golgi associated secretory pathway kinase, humanhuman

TSL 3

Gene FAM20C, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20C-202ENST00000471328 NISCHQ9Y2I1 1504 aa45.16■■■■■ 4.82
FAM20C-202ENST00000471328 CCDC180Q9P1Z9 1646 aa40.09■■■■■ 4.01
FAM20C-202ENST00000471328 ABCC9O60706 1549 aa38.88■■■■□ 3.81
FAM20C-202ENST00000471328 ZCCHC6Q5VYS8 1495 aaKnown RBP37.69■■■■□ 3.62
FAM20C-202ENST00000471328 DCAF8L2P0C7V8 631 aa37.61■■■■□ 3.61
FAM20C-202ENST00000471328 NACADO15069 1562 aa37.58■■■■□ 3.61
FAM20C-202ENST00000471328 RB1CC1Q8TDY2 1594 aa37.56■■■■□ 3.6
FAM20C-202ENST00000471328 MYO15BQ96JP2 1530 aa37.42■■■■□ 3.58
FAM20C-202ENST00000471328 DCAF1Q9Y4B6 1507 aa37.38■■■■□ 3.57
FAM20C-202ENST00000471328 UNC13AQ9UPW8 1703 aa36.78■■■■□ 3.48
FAM20C-202ENST00000471328 SCRIBQ14160 1630 aa36.59■■■■□ 3.45
FAM20C-202ENST00000471328 BICRAQ9NZM4 1560 aa36.38■■■■□ 3.41
FAM20C-202ENST00000471328 PABPN1Q86U42 306 aaKnown RBP eCLIP36.35■■■■□ 3.41
FAM20C-202ENST00000471328 SHROOM4Q9ULL8 1493 aa36.03■■■■□ 3.36
FAM20C-202ENST00000471328 EIF4G1Q04637 1599 aaKnown RBP35.41■■■■□ 3.26
FAM20C-202ENST00000471328 DNAJC5BQ9UF47 199 aa35.34■■■■□ 3.25
FAM20C-202ENST00000471328 CC2D2AQ9P2K1 1620 aa35.21■■■■□ 3.23
FAM20C-202ENST00000471328 CECR2Q9BXF3 1484 aa35.14■■■■□ 3.22
FAM20C-202ENST00000471328 SMARCA4P51532 1647 aa35.02■■■■□ 3.2
FAM20C-202ENST00000471328 BAZ1AQ9NRL2 1556 aaPredicted RBP35.01■■■■□ 3.2
FAM20C-202ENST00000471328 MROH2BQ7Z745 1585 aa34.81■■■■□ 3.16
FAM20C-202ENST00000471328 SMARCA2P51531 1590 aa34.71■■■■□ 3.15
FAM20C-202ENST00000471328 ATAD2BQ9ULI0 1458 aa34.71■■■■□ 3.15
FAM20C-202ENST00000471328 PEG3Q9GZU2 1588 aa34.65■■■■□ 3.14
FAM20C-202ENST00000471328 NCAPD3P42695 1498 aa34.63■■■■□ 3.13
FAM20C-202ENST00000471328 HMGXB3Q12766 1538 aa34.53■■■■□ 3.12
FAM20C-202ENST00000471328 RSF1Q96T23 1441 aaPredicted RBP34.51■■■■□ 3.12
FAM20C-202ENST00000471328 WIZO95785 1651 aa34.5■■■■□ 3.11
FAM20C-202ENST00000471328 BAZ1BQ9UIG0 1483 aaKnown RBP34.46■■■■□ 3.11
FAM20C-202ENST00000471328 TOP2AP11388 1531 aaKnown RBP34.14■■■■□ 3.06
FAM20C-202ENST00000471328 SUPT5HO00267 1087 aaKnown RBP33.88■■■■□ 3.01
FAM20C-202ENST00000471328 NESP48681 1621 aa33.72■■■□□ 2.99
FAM20C-202ENST00000471328 LAMC3Q9Y6N6 1575 aa33.72■■■□□ 2.99
FAM20C-202ENST00000471328 CCDC88BA6NC98 1476 aa33.7■■■□□ 2.99
FAM20C-202ENST00000471328 CADPSQ9ULU8 1353 aa33.64■■■□□ 2.98
FAM20C-202ENST00000471328 CFTRP13569 1480 aa33.51■■■□□ 2.96
FAM20C-202ENST00000471328 ERCC6Q03468 1493 aa33.5■■■□□ 2.95
FAM20C-202ENST00000471328 PDS5BQ9NTI5 1447 aa33.45■■■□□ 2.95
FAM20C-202ENST00000471328 PRDM2Q13029 1718 aa33.42■■■□□ 2.94
FAM20C-202ENST00000471328 KIF21AQ7Z4S6 1674 aa33.41■■■□□ 2.94
FAM20C-202ENST00000471328 FANCD2Q9BXW9 1451 aa33.28■■■□□ 2.92
FAM20C-202ENST00000471328 CEP164Q9UPV0 1460 aa33.22■■■□□ 2.91
FAM20C-202ENST00000471328 THOC2Q8NI27 1593 aaKnown RBP33.18■■■□□ 2.9
FAM20C-202ENST00000471328 MRC2Q9UBG0 1479 aa33.1■■■□□ 2.89
FAM20C-202ENST00000471328 CUX2O14529 1486 aa33.03■■■□□ 2.88
FAM20C-202ENST00000471328 WDR62O43379 1518 aa32.99■■■□□ 2.87
FAM20C-202ENST00000471328 URB2Q14146 1524 aaKnown RBP32.92■■■□□ 2.86
FAM20C-202ENST00000471328 ABCC8Q09428 1581 aa32.81■■■□□ 2.84
FAM20C-202ENST00000471328 DNMBPQ6XZF7 1577 aa32.79■■■□□ 2.84
FAM20C-202ENST00000471328 TOPBP1Q92547 1522 aa32.79■■■□□ 2.84
FAM20C-202ENST00000471328 CUX1P39880 1505 aa32.65■■■□□ 2.82
FAM20C-202ENST00000471328 WRNQ14191 1432 aaPredicted RBP eCLIP32.55■■■□□ 2.8
FAM20C-202ENST00000471328 POLA1P09884 1462 aaPredicted RBP32.52■■■□□ 2.8
FAM20C-202ENST00000471328 IFT140Q96RY7 1462 aa32.5■■■□□ 2.79
FAM20C-202ENST00000471328 FGD5Q6ZNL6 1462 aa32.49■■■□□ 2.79
FAM20C-202ENST00000471328 BIVM-ERCC5R4GMW8 1640 aa32.48■■■□□ 2.79
FAM20C-202ENST00000471328 TOP2BQ02880 1626 aa32.48■■■□□ 2.79
FAM20C-202ENST00000471328 SYNJ1O43426 1573 aa32.47■■■□□ 2.79
FAM20C-202ENST00000471328 TARBP1Q13395 1621 aaKnown RBP32.41■■■□□ 2.78
FAM20C-202ENST00000471328 SOGA1O94964 1423 aa32.38■■■□□ 2.77
FAM20C-202ENST00000471328 RAD54L2Q9Y4B4 1467 aa32.37■■■□□ 2.77
FAM20C-202ENST00000471328 ZNF608Q9ULD9 1512 aaPredicted RBP32.31■■■□□ 2.76
FAM20C-202ENST00000471328 WDR97A6NE52 1622 aa32.26■■■□□ 2.76
FAM20C-202ENST00000471328 EIF4G3O43432 1585 aaKnown RBP32.25■■■□□ 2.75
FAM20C-202ENST00000471328 ABCA10Q8WWZ4 1543 aa32.19■■■□□ 2.74
FAM20C-202ENST00000471328 AQRO60306 1485 aaKnown RBP eCLIP32.17■■■□□ 2.74
FAM20C-202ENST00000471328 TDRD9Q8NDG6 1382 aaKnown RBP32.16■■■□□ 2.74
FAM20C-202ENST00000471328 ABCA5Q8WWZ7 1642 aa32.06■■■□□ 2.72
FAM20C-202ENST00000471328 GAPVD1Q14C86 1478 aa32.03■■■□□ 2.72
FAM20C-202ENST00000471328 PBRM1Q86U86 1689 aa32.02■■■□□ 2.72
FAM20C-202ENST00000471328 TRIM41Q8WV44 630 aa31.99■■■□□ 2.71
FAM20C-202ENST00000471328 GRIN2BQ13224 1484 aa31.98■■■□□ 2.71
FAM20C-202ENST00000471328 SNAPC4Q5SXM2 1469 aa31.91■■■□□ 2.7
FAM20C-202ENST00000471328 MAGI1Q96QZ7 1491 aaPredicted RBP31.87■■■□□ 2.69
FAM20C-202ENST00000471328 KIF27Q86VH2 1401 aa31.85■■■□□ 2.69
FAM20C-202ENST00000471328 CHD1O14646 1710 aa31.83■■■□□ 2.69
FAM20C-202ENST00000471328 ERICH3Q5RHP9 1530 aa31.82■■■□□ 2.68
FAM20C-202ENST00000471328 CHIC1Q5VXU3 224 aa31.77■■■□□ 2.68
FAM20C-202ENST00000471328 ADAMTS12P58397 1594 aa31.74■■■□□ 2.67
FAM20C-202ENST00000471328 SYNJ2O15056 1496 aa31.74■■■□□ 2.67
FAM20C-202ENST00000471328 FBLN2P98095 1184 aa31.74■■■□□ 2.67
FAM20C-202ENST00000471328 CHMP7Q8WUX9 453 aaPredicted RBP31.7■■■□□ 2.67
FAM20C-202ENST00000471328 OSCARQ8IYS5 282 aa31.69■■■□□ 2.66
FAM20C-202ENST00000471328 FHAD1B1AJZ9 1412 aa31.66■■■□□ 2.66
FAM20C-202ENST00000471328 IGF1RP08069 1367 aa31.65■■■□□ 2.66
FAM20C-202ENST00000471328 RUSC2Q8N2Y8 1516 aa31.64■■■□□ 2.66
FAM20C-202ENST00000471328 CUL7Q14999 1698 aa31.63■■■□□ 2.65
FAM20C-202ENST00000471328 DNAJC5Q9H3Z4 198 aa31.61■■■□□ 2.65
FAM20C-202ENST00000471328 GRIN2AQ12879 1464 aa31.57■■■□□ 2.64
FAM20C-202ENST00000471328 CARMIL1Q5VZK9 1371 aa31.49■■■□□ 2.63
FAM20C-202ENST00000471328 EEA1Q15075 1411 aa31.44■■■□□ 2.62
FAM20C-202ENST00000471328 CLASP1Q7Z460 1538 aa31.42■■■□□ 2.62
FAM20C-202ENST00000471328 CEP170Q5SW79 1584 aa31.42■■■□□ 2.62
FAM20C-202ENST00000471328 NUP160Q12769 1436 aa31.41■■■□□ 2.62
FAM20C-202ENST00000471328 RAPGEF2Q9Y4G8 1499 aa31.35■■■□□ 2.61
FAM20C-202ENST00000471328 CSRNP3Q8WYN3 585 aa31.33■■■□□ 2.61
FAM20C-202ENST00000471328 FAM9AQ8IZU1 332 aaPredicted RBP31.32■■■□□ 2.6
FAM20C-202ENST00000471328 PRXQ9BXM0 1461 aa31.29■■■□□ 2.6
FAM20C-202ENST00000471328 RIMBP3CA6NJZ7 1639 aa31.2■■■□□ 2.59
FAM20C-202ENST00000471328 RIMBP3BA6NNM3 1639 aa31.2■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms