RNA–Protein interactions for RNA: ENST00000591007.6

SUGP1-212, Transcript of SURP and G-patch domain containing 1, humanhuman

TSL 1 (best)

Gene SUGP1, Length 1,377 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP1-212ENST00000591007 NISCHQ9Y2I1 1504 aa32.45■■■□□ 2.79
SUGP1-212ENST00000591007 CCDC180Q9P1Z9 1646 aa29.02■■■□□ 2.24
SUGP1-212ENST00000591007 ABCC9O60706 1549 aa28.7■■■□□ 2.18
SUGP1-212ENST00000591007 DNAJC5BQ9UF47 199 aa27.86■■■□□ 2.05
SUGP1-212ENST00000591007 RB1CC1Q8TDY2 1594 aa27.46■■□□□ 1.99
SUGP1-212ENST00000591007 NACADO15069 1562 aa27.34■■□□□ 1.97
SUGP1-212ENST00000591007 DCAF8L2P0C7V8 631 aa27.17■■□□□ 1.94
SUGP1-212ENST00000591007 MYO15BQ96JP2 1530 aa27.06■■□□□ 1.92
SUGP1-212ENST00000591007 ZCCHC6Q5VYS8 1495 aaKnown RBP26.98■■□□□ 1.91
SUGP1-212ENST00000591007 UNC13AQ9UPW8 1703 aa26.89■■□□□ 1.9
SUGP1-212ENST00000591007 DCAF1Q9Y4B6 1507 aa26.83■■□□□ 1.89
SUGP1-212ENST00000591007 PABPN1Q86U42 306 aaKnown RBP eCLIP26.73■■□□□ 1.872e-6■■□□□ 13.9
SUGP1-212ENST00000591007 BICRAQ9NZM4 1560 aa26.68■■□□□ 1.86
SUGP1-212ENST00000591007 SCRIBQ14160 1630 aa26.46■■□□□ 1.83
SUGP1-212ENST00000591007 DNAJC5Q9H3Z4 198 aa26.35■■□□□ 1.81
SUGP1-212ENST00000591007 SHROOM4Q9ULL8 1493 aa26.33■■□□□ 1.81
SUGP1-212ENST00000591007 EIF4G1Q04637 1599 aaKnown RBP25.99■■□□□ 1.75
SUGP1-212ENST00000591007 CC2D2AQ9P2K1 1620 aa25.97■■□□□ 1.75
SUGP1-212ENST00000591007 CECR2Q9BXF3 1484 aa25.82■■□□□ 1.72
SUGP1-212ENST00000591007 SMARCA4P51532 1647 aa25.28■■□□□ 1.64
SUGP1-212ENST00000591007 NCAPD3P42695 1498 aa25.22■■□□□ 1.63
SUGP1-212ENST00000591007 ATAD2BQ9ULI0 1458 aa25.2■■□□□ 1.62
SUGP1-212ENST00000591007 BAZ1AQ9NRL2 1556 aaPredicted RBP25.17■■□□□ 1.62
SUGP1-212ENST00000591007 SMARCA2P51531 1590 aa25.15■■□□□ 1.62
SUGP1-212ENST00000591007 HMGXB3Q12766 1538 aa25.1■■□□□ 1.61
SUGP1-212ENST00000591007 PEG3Q9GZU2 1588 aa25.03■■□□□ 1.6
SUGP1-212ENST00000591007 MROH2BQ7Z745 1585 aa25.02■■□□□ 1.6
SUGP1-212ENST00000591007 BAZ1BQ9UIG0 1483 aaKnown RBP24.97■■□□□ 1.59
SUGP1-212ENST00000591007 CUX2O14529 1486 aa24.83■■□□□ 1.57
SUGP1-212ENST00000591007 ERCC6Q03468 1493 aa24.75■■□□□ 1.55
SUGP1-212ENST00000591007 NESP48681 1621 aa24.75■■□□□ 1.55
SUGP1-212ENST00000591007 WIZO95785 1651 aa24.74■■□□□ 1.55
SUGP1-212ENST00000591007 TRIM41Q8WV44 630 aa24.69■■□□□ 1.54
SUGP1-212ENST00000591007 LAMC3Q9Y6N6 1575 aa24.64■■□□□ 1.53
SUGP1-212ENST00000591007 RSF1Q96T23 1441 aaPredicted RBP24.58■■□□□ 1.53
SUGP1-212ENST00000591007 THOC2Q8NI27 1593 aaKnown RBP24.48■■□□□ 1.51
SUGP1-212ENST00000591007 KIF21AQ7Z4S6 1674 aa24.47■■□□□ 1.51
SUGP1-212ENST00000591007 CADPSQ9ULU8 1353 aa24.46■■□□□ 1.51
SUGP1-212ENST00000591007 TOP2AP11388 1531 aaKnown RBP24.44■■□□□ 1.5
SUGP1-212ENST00000591007 PDS5BQ9NTI5 1447 aa24.44■■□□□ 1.5
SUGP1-212ENST00000591007 CFTRP13569 1480 aa24.26■■□□□ 1.47
SUGP1-212ENST00000591007 MRC2Q9UBG0 1479 aa24.24■■□□□ 1.47
SUGP1-212ENST00000591007 CEP164Q9UPV0 1460 aa24.21■■□□□ 1.47
SUGP1-212ENST00000591007 FANCD2Q9BXW9 1451 aa24.2■■□□□ 1.46
SUGP1-212ENST00000591007 WDR62O43379 1518 aa24.2■■□□□ 1.46
SUGP1-212ENST00000591007 CCDC88BA6NC98 1476 aa24.14■■□□□ 1.46
SUGP1-212ENST00000591007 PRDM2Q13029 1718 aa24.1■■□□□ 1.45
SUGP1-212ENST00000591007 URB2Q14146 1524 aaKnown RBP24■■□□□ 1.43
SUGP1-212ENST00000591007 TOPBP1Q92547 1522 aa23.79■■□□□ 1.4
SUGP1-212ENST00000591007 DNMBPQ6XZF7 1577 aa23.74■■□□□ 1.39
SUGP1-212ENST00000591007 ABCC8Q09428 1581 aa23.72■■□□□ 1.39
SUGP1-212ENST00000591007 IFT140Q96RY7 1462 aa23.7■■□□□ 1.38
SUGP1-212ENST00000591007 SUPT5HO00267 1087 aaKnown RBP23.66■■□□□ 1.38
SUGP1-212ENST00000591007 ZNF608Q9ULD9 1512 aaPredicted RBP23.65■■□□□ 1.38
SUGP1-212ENST00000591007 TARBP1Q13395 1621 aaKnown RBP23.57■■□□□ 1.36
SUGP1-212ENST00000591007 POLA1P09884 1462 aaPredicted RBP23.57■■□□□ 1.36
SUGP1-212ENST00000591007 EIF4G3O43432 1585 aaKnown RBP23.56■■□□□ 1.36
SUGP1-212ENST00000591007 OSCARQ8IYS5 282 aa23.52■■□□□ 1.36
SUGP1-212ENST00000591007 CUX1P39880 1505 aa23.49■■□□□ 1.35
SUGP1-212ENST00000591007 RAD54L2Q9Y4B4 1467 aa23.46■■□□□ 1.35
SUGP1-212ENST00000591007 AQRO60306 1485 aaKnown RBP eCLIP23.45■■□□□ 1.354e-6■■■■□ 24.6
SUGP1-212ENST00000591007 FGD5Q6ZNL6 1462 aa23.45■■□□□ 1.35
SUGP1-212ENST00000591007 RIMBP3CA6NJZ7 1639 aa23.44■■□□□ 1.34
SUGP1-212ENST00000591007 RIMBP3BA6NNM3 1639 aa23.44■■□□□ 1.34
SUGP1-212ENST00000591007 RIMBP3Q9UFD9 1639 aa23.44■■□□□ 1.34
SUGP1-212ENST00000591007 SOGA1O94964 1423 aa23.43■■□□□ 1.34
SUGP1-212ENST00000591007 AEBP2Q6ZN18 517 aaPredicted RBP23.42■■□□□ 1.34
SUGP1-212ENST00000591007 WDR97A6NE52 1622 aa23.35■■□□□ 1.33
SUGP1-212ENST00000591007 TDRD9Q8NDG6 1382 aaKnown RBP23.34■■□□□ 1.33
SUGP1-212ENST00000591007 CHD1O14646 1710 aa23.33■■□□□ 1.33
SUGP1-212ENST00000591007 SNAPC4Q5SXM2 1469 aa23.24■■□□□ 1.31
SUGP1-212ENST00000591007 TRHP20396 242 aaPredicted RBP23.23■■□□□ 1.31
SUGP1-212ENST00000591007 ABCA10Q8WWZ4 1543 aa23.21■■□□□ 1.31
SUGP1-212ENST00000591007 BIVM-ERCC5R4GMW8 1640 aa23.21■■□□□ 1.31
SUGP1-212ENST00000591007 GRIN2BQ13224 1484 aa23.2■■□□□ 1.31
SUGP1-212ENST00000591007 ARHGEF11O15085 1522 aa23.2■■□□□ 1.31
SUGP1-212ENST00000591007 TOP2BQ02880 1626 aa23.19■■□□□ 1.3
SUGP1-212ENST00000591007 FBLN2P98095 1184 aa23.19■■□□□ 1.3
SUGP1-212ENST00000591007 MAGI1Q96QZ7 1491 aaPredicted RBP23.19■■□□□ 1.3
SUGP1-212ENST00000591007 SYNJ1O43426 1573 aa23.19■■□□□ 1.3
SUGP1-212ENST00000591007 PBRM1Q86U86 1689 aa23.19■■□□□ 1.3
SUGP1-212ENST00000591007 WRNQ14191 1432 aaPredicted RBP eCLIP23.18■■□□□ 1.3
SUGP1-212ENST00000591007 ABCA5Q8WWZ7 1642 aa23.17■■□□□ 1.3
SUGP1-212ENST00000591007 GAPVD1Q14C86 1478 aa23.16■■□□□ 1.3
SUGP1-212ENST00000591007 CYB5RLQ6IPT4 315 aa23.13■■□□□ 1.29
SUGP1-212ENST00000591007 SYNJ2O15056 1496 aa23.1■■□□□ 1.29
SUGP1-212ENST00000591007 CHMP7Q8WUX9 453 aaPredicted RBP23.07■■□□□ 1.28
SUGP1-212ENST00000591007 CLASP1Q7Z460 1538 aa23.06■■□□□ 1.28
SUGP1-212ENST00000591007 ARAP1Q96P48 1450 aa22.98■■□□□ 1.27
SUGP1-212ENST00000591007 ADAMTS12P58397 1594 aa22.98■■□□□ 1.27
SUGP1-212ENST00000591007 ERICH3Q5RHP9 1530 aa22.92■■□□□ 1.26
SUGP1-212ENST00000591007 GRIN2AQ12879 1464 aa22.92■■□□□ 1.26
SUGP1-212ENST00000591007 FHAD1B1AJZ9 1412 aa22.87■■□□□ 1.25
SUGP1-212ENST00000591007 CEP170Q5SW79 1584 aa22.85■■□□□ 1.25
SUGP1-212ENST00000591007 NUP160Q12769 1436 aa22.83■■□□□ 1.25
SUGP1-212ENST00000591007 ILDR1Q86SU0 546 aaPredicted RBP22.78■■□□□ 1.24
SUGP1-212ENST00000591007 ERCC6L2Q5T890 1561 aa22.73■■□□□ 1.23
SUGP1-212ENST00000591007 SHROOM2Q13796 1616 aa22.73■■□□□ 1.23
SUGP1-212ENST00000591007 KIF27Q86VH2 1401 aa22.71■■□□□ 1.23
SUGP1-212ENST00000591007 IGF1RP08069 1367 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 1417.1 ms