Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.39■□□□□ 0.69
USP6NLQ92738 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP6NLQ92738 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.39■□□□□ 0.69
USP6NLQ92738 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP6NLQ92738 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP6NLQ92738 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
USP6NLQ92738 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP6NLQ92738 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP6NLQ92738 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP6NLQ92738 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP6NLQ92738 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP6NLQ92738 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP6NLQ92738 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP6NLQ92738 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
USP6NLQ92738 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP6NLQ92738 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.38■□□□□ 0.69
USP6NLQ92738 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP6NLQ92738 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.38■□□□□ 0.69
USP6NLQ92738 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
USP6NLQ92738 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.38■□□□□ 0.69
USP6NLQ92738 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.38■□□□□ 0.69
USP6NLQ92738 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.38■□□□□ 0.69
USP6NLQ92738 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP6NLQ92738 AC125807.1-201ENST00000483097 614 ntBASIC19.38■□□□□ 0.69
USP6NLQ92738 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.38■□□□□ 0.69
USP6NLQ92738 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.38■□□□□ 0.69
USP6NLQ92738 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP6NLQ92738 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP6NLQ92738 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.38■□□□□ 0.69
USP6NLQ92738 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP6NLQ92738 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.38■□□□□ 0.69
USP6NLQ92738 AL009183.1-201ENST00000603760 355 ntBASIC19.38■□□□□ 0.69
USP6NLQ92738 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.38■□□□□ 0.69
USP6NLQ92738 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP6NLQ92738 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
USP6NLQ92738 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.38■□□□□ 0.69
USP6NLQ92738 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP6NLQ92738 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP6NLQ92738 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.37■□□□□ 0.69
USP6NLQ92738 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP6NLQ92738 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP6NLQ92738 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
USP6NLQ92738 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP6NLQ92738 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP6NLQ92738 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP6NLQ92738 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.37■□□□□ 0.69
USP6NLQ92738 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP6NLQ92738 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
USP6NLQ92738 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP6NLQ92738 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP6NLQ92738 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP6NLQ92738 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP6NLQ92738 TREML5P-201ENST00000421694 576 ntBASIC19.37■□□□□ 0.69
USP6NLQ92738 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP6NLQ92738 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP6NLQ92738 AC008761.3-201ENST00000624803 892 ntBASIC19.37■□□□□ 0.69
USP6NLQ92738 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.37■□□□□ 0.69
USP6NLQ92738 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
USP6NLQ92738 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.37■□□□□ 0.69
USP6NLQ92738 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
USP6NLQ92738 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP6NLQ92738 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.37■□□□□ 0.69
USP6NLQ92738 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP6NLQ92738 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
USP6NLQ92738 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP6NLQ92738 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.36■□□□□ 0.69
USP6NLQ92738 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.36■□□□□ 0.69
USP6NLQ92738 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.36■□□□□ 0.69
USP6NLQ92738 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP6NLQ92738 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP6NLQ92738 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP6NLQ92738 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
USP6NLQ92738 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
USP6NLQ92738 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.36■□□□□ 0.69
USP6NLQ92738 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
USP6NLQ92738 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.36■□□□□ 0.69
USP6NLQ92738 AC109635.5-201ENST00000533593 962 ntBASIC19.36■□□□□ 0.69
USP6NLQ92738 SLC25A39P2-201ENST00000537614 270 ntBASIC19.36■□□□□ 0.69
USP6NLQ92738 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.36■□□□□ 0.69
USP6NLQ92738 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.36■□□□□ 0.69
USP6NLQ92738 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
USP6NLQ92738 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
USP6NLQ92738 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.36■□□□□ 0.69
USP6NLQ92738 LINC02560-201ENST00000596379 459 ntBASIC19.36■□□□□ 0.69
USP6NLQ92738 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP6NLQ92738 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP6NLQ92738 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.36■□□□□ 0.69
USP6NLQ92738 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
USP6NLQ92738 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
USP6NLQ92738 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP6NLQ92738 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
USP6NLQ92738 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP6NLQ92738 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP6NLQ92738 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
USP6NLQ92738 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
USP6NLQ92738 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
USP6NLQ92738 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP6NLQ92738 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
USP6NLQ92738 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP6NLQ92738 AC020763.4-201ENST00000623414 4170 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms