Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.37□□□□□ -0.11
COMMD1Q8N668 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.37□□□□□ -0.11
COMMD1Q8N668 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.36□□□□□ -0.11
COMMD1Q8N668 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD1Q8N668 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.36□□□□□ -0.11
COMMD1Q8N668 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.36□□□□□ -0.11
COMMD1Q8N668 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD1Q8N668 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
COMMD1Q8N668 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
COMMD1Q8N668 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD1Q8N668 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
COMMD1Q8N668 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
COMMD1Q8N668 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.36□□□□□ -0.11
COMMD1Q8N668 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD1Q8N668 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.36□□□□□ -0.11
COMMD1Q8N668 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD1Q8N668 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.36□□□□□ -0.11
COMMD1Q8N668 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.36□□□□□ -0.11
COMMD1Q8N668 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.36□□□□□ -0.11
COMMD1Q8N668 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD1Q8N668 SPDYE13P-201ENST00000445314 798 ntBASIC14.36□□□□□ -0.11
COMMD1Q8N668 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.36□□□□□ -0.11
COMMD1Q8N668 KRT8P26-201ENST00000534154 1276 ntBASIC14.36□□□□□ -0.11
COMMD1Q8N668 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
COMMD1Q8N668 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.36□□□□□ -0.11
COMMD1Q8N668 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.36□□□□□ -0.11
COMMD1Q8N668 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.36□□□□□ -0.11
COMMD1Q8N668 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.36□□□□□ -0.11
COMMD1Q8N668 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
COMMD1Q8N668 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.36□□□□□ -0.11
COMMD1Q8N668 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
COMMD1Q8N668 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD1Q8N668 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD1Q8N668 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD1Q8N668 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.36□□□□□ -0.11
COMMD1Q8N668 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD1Q8N668 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD1Q8N668 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
COMMD1Q8N668 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
COMMD1Q8N668 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
COMMD1Q8N668 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD1Q8N668 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD1Q8N668 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD1Q8N668 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD1Q8N668 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD1Q8N668 CYP2T1P-202ENST00000641596 2535 ntBASIC14.36□□□□□ -0.11
COMMD1Q8N668 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD1Q8N668 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COMMD1Q8N668 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.35□□□□□ -0.11
COMMD1Q8N668 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
COMMD1Q8N668 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
COMMD1Q8N668 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COMMD1Q8N668 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
COMMD1Q8N668 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
COMMD1Q8N668 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
COMMD1Q8N668 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COMMD1Q8N668 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
COMMD1Q8N668 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COMMD1Q8N668 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COMMD1Q8N668 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COMMD1Q8N668 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
COMMD1Q8N668 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.35□□□□□ -0.11
COMMD1Q8N668 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.35□□□□□ -0.11
COMMD1Q8N668 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.35□□□□□ -0.11
COMMD1Q8N668 AP003733.1-201ENST00000491725 852 ntBASIC14.35□□□□□ -0.11
COMMD1Q8N668 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.35□□□□□ -0.11
COMMD1Q8N668 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.35□□□□□ -0.11
COMMD1Q8N668 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.35□□□□□ -0.11
COMMD1Q8N668 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.35□□□□□ -0.11
COMMD1Q8N668 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
COMMD1Q8N668 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
COMMD1Q8N668 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
COMMD1Q8N668 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
COMMD1Q8N668 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
COMMD1Q8N668 AL513523.2-202ENST00000427283 2040 ntBASIC14.35□□□□□ -0.11
COMMD1Q8N668 AC009102.3-201ENST00000623118 1491 ntBASIC14.35□□□□□ -0.11
COMMD1Q8N668 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COMMD1Q8N668 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
COMMD1Q8N668 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.35□□□□□ -0.11
COMMD1Q8N668 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COMMD1Q8N668 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COMMD1Q8N668 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COMMD1Q8N668 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.34□□□□□ -0.11
COMMD1Q8N668 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
COMMD1Q8N668 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD1Q8N668 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.34□□□□□ -0.11
COMMD1Q8N668 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
COMMD1Q8N668 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD1Q8N668 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD1Q8N668 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.34□□□□□ -0.11
COMMD1Q8N668 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD1Q8N668 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD1Q8N668 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD1Q8N668 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD1Q8N668 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
COMMD1Q8N668 AC005052.1-201ENST00000625181 2492 ntBASIC14.34□□□□□ -0.11
COMMD1Q8N668 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
COMMD1Q8N668 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD1Q8N668 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.34□□□□□ -0.11
COMMD1Q8N668 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms