Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDCP2Q5VXM1 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.25■□□□□ 0.19
CDCP2Q5VXM1 TREML5P-201ENST00000421694 576 ntBASIC16.25■□□□□ 0.19
CDCP2Q5VXM1 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.25■□□□□ 0.19
CDCP2Q5VXM1 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.25■□□□□ 0.19
CDCP2Q5VXM1 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.25■□□□□ 0.19
CDCP2Q5VXM1 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.25■□□□□ 0.19
CDCP2Q5VXM1 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.25■□□□□ 0.19
CDCP2Q5VXM1 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CDCP2Q5VXM1 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.25■□□□□ 0.19
CDCP2Q5VXM1 AL158211.3-201ENST00000607385 239 ntBASIC16.25■□□□□ 0.19
CDCP2Q5VXM1 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDCP2Q5VXM1 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDCP2Q5VXM1 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CDCP2Q5VXM1 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.25■□□□□ 0.19
CDCP2Q5VXM1 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDCP2Q5VXM1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDCP2Q5VXM1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDCP2Q5VXM1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDCP2Q5VXM1 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.25■□□□□ 0.19
CDCP2Q5VXM1 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CDCP2Q5VXM1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDCP2Q5VXM1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 UXT-AS1-201ENST00000590504 1525 ntBASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 AC012569.1-201ENST00000591191 1524 ntBASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 SLC25A39P2-201ENST00000537614 270 ntBASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 AC008761.3-201ENST00000624803 892 ntBASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDCP2Q5VXM1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 AC005332.8-201ENST00000622750 2735 ntBASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 LINC02560-201ENST00000596379 459 ntBASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.23■□□□□ 0.19
CDCP2Q5VXM1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms