Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ATF1P18846 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATF1P18846 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATF1P18846 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ATF1P18846 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATF1P18846 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATF1P18846 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.16■□□□□ 0.02
ATF1P18846 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATF1P18846 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATF1P18846 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATF1P18846 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.16■□□□□ 0.02
ATF1P18846 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.16■□□□□ 0.02
ATF1P18846 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
ATF1P18846 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATF1P18846 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATF1P18846 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.15■□□□□ 0.02
ATF1P18846 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATF1P18846 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATF1P18846 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.15■□□□□ 0.02
ATF1P18846 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATF1P18846 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATF1P18846 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATF1P18846 LINC00554-201ENST00000564841 3011 ntBASIC15.15■□□□□ 0.02
ATF1P18846 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATF1P18846 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATF1P18846 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ATF1P18846 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATF1P18846 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.15■□□□□ 0.02
ATF1P18846 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATF1P18846 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.15■□□□□ 0.02
ATF1P18846 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.15■□□□□ 0.02
ATF1P18846 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.15■□□□□ 0.02
ATF1P18846 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.15■□□□□ 0.02
ATF1P18846 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATF1P18846 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.15■□□□□ 0.02
ATF1P18846 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.15■□□□□ 0.02
ATF1P18846 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.15■□□□□ 0.02
ATF1P18846 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
ATF1P18846 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.15■□□□□ 0.02
ATF1P18846 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATF1P18846 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.15■□□□□ 0.02
ATF1P18846 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATF1P18846 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATF1P18846 AL513523.2-202ENST00000427283 2040 ntBASIC15.15■□□□□ 0.02
ATF1P18846 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
ATF1P18846 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATF1P18846 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATF1P18846 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ATF1P18846 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
ATF1P18846 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.15■□□□□ 0.02
ATF1P18846 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATF1P18846 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ATF1P18846 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ATF1P18846 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ATF1P18846 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATF1P18846 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.15■□□□□ 0.02
ATF1P18846 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATF1P18846 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
ATF1P18846 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATF1P18846 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ATF1P18846 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATF1P18846 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATF1P18846 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATF1P18846 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATF1P18846 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.14■□□□□ 0.01
ATF1P18846 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.14■□□□□ 0.01
ATF1P18846 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATF1P18846 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.14■□□□□ 0.01
ATF1P18846 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.14■□□□□ 0.01
ATF1P18846 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
ATF1P18846 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATF1P18846 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATF1P18846 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.14■□□□□ 0.01
ATF1P18846 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.14■□□□□ 0.01
ATF1P18846 AC112907.2-201ENST00000448639 330 ntBASIC15.14■□□□□ 0.01
ATF1P18846 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.14■□□□□ 0.01
ATF1P18846 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.14■□□□□ 0.01
ATF1P18846 AL390719.2-201ENST00000606993 987 ntBASIC15.14■□□□□ 0.01
ATF1P18846 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATF1P18846 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
ATF1P18846 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
ATF1P18846 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATF1P18846 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATF1P18846 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATF1P18846 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATF1P18846 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATF1P18846 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATF1P18846 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.14■□□□□ 0.01
ATF1P18846 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATF1P18846 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.14■□□□□ 0.01
ATF1P18846 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.14■□□□□ 0.01
ATF1P18846 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.13■□□□□ 0.01
ATF1P18846 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.13■□□□□ 0.01
ATF1P18846 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATF1P18846 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATF1P18846 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATF1P18846 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ATF1P18846 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATF1P18846 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATF1P18846 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms