Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ATP6V0A1Q93050 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC27.24■■□□□ 1.95
ATP6V0A1Q93050 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC27.23■■□□□ 1.95
ATP6V0A1Q93050 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ATP6V0A1Q93050 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ATP6V0A1Q93050 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC27.23■■□□□ 1.95
ATP6V0A1Q93050 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC27.22■■□□□ 1.95
ATP6V0A1Q93050 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC27.22■■□□□ 1.95
ATP6V0A1Q93050 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC27.22■■□□□ 1.95
ATP6V0A1Q93050 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC27.22■■□□□ 1.95
ATP6V0A1Q93050 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ATP6V0A1Q93050 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
ATP6V0A1Q93050 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
ATP6V0A1Q93050 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
ATP6V0A1Q93050 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ATP6V0A1Q93050 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC27.22■■□□□ 1.95
ATP6V0A1Q93050 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
ATP6V0A1Q93050 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC27.21■■□□□ 1.95
ATP6V0A1Q93050 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC27.21■■□□□ 1.95
ATP6V0A1Q93050 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
ATP6V0A1Q93050 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
ATP6V0A1Q93050 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
ATP6V0A1Q93050 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
ATP6V0A1Q93050 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC27.2■■□□□ 1.95
ATP6V0A1Q93050 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
ATP6V0A1Q93050 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
ATP6V0A1Q93050 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
ATP6V0A1Q93050 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
ATP6V0A1Q93050 IDNK-203ENST00000405990 629 ntTSL 2 BASIC27.2■■□□□ 1.94
ATP6V0A1Q93050 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
ATP6V0A1Q93050 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC27.19■■□□□ 1.94
ATP6V0A1Q93050 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
ATP6V0A1Q93050 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
ATP6V0A1Q93050 PVT1_1.1-201ENST00000615125 194 ntBASIC27.19■■□□□ 1.94
ATP6V0A1Q93050 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
ATP6V0A1Q93050 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
ATP6V0A1Q93050 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
ATP6V0A1Q93050 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
ATP6V0A1Q93050 YBX1P4-201ENST00000392794 808 ntBASIC27.18■■□□□ 1.94
ATP6V0A1Q93050 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
ATP6V0A1Q93050 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
ATP6V0A1Q93050 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
ATP6V0A1Q93050 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
ATP6V0A1Q93050 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
ATP6V0A1Q93050 AC103834.1-201ENST00000520383 144 ntBASIC27.17■■□□□ 1.94
ATP6V0A1Q93050 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
ATP6V0A1Q93050 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC27.16■■□□□ 1.94
ATP6V0A1Q93050 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC27.16■■□□□ 1.94
ATP6V0A1Q93050 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC27.16■■□□□ 1.94
ATP6V0A1Q93050 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
ATP6V0A1Q93050 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
ATP6V0A1Q93050 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
ATP6V0A1Q93050 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
ATP6V0A1Q93050 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC27.15■■□□□ 1.94
ATP6V0A1Q93050 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.94
ATP6V0A1Q93050 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
ATP6V0A1Q93050 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
ATP6V0A1Q93050 TRIR-205ENST00000592273 783 ntTSL 3 BASIC27.14■■□□□ 1.94
ATP6V0A1Q93050 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC27.14■■□□□ 1.93
ATP6V0A1Q93050 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.93
ATP6V0A1Q93050 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC27.13■■□□□ 1.93
ATP6V0A1Q93050 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
ATP6V0A1Q93050 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
ATP6V0A1Q93050 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
ATP6V0A1Q93050 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
ATP6V0A1Q93050 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
ATP6V0A1Q93050 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC27.12■■□□□ 1.93
ATP6V0A1Q93050 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
ATP6V0A1Q93050 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
ATP6V0A1Q93050 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC27.11■■□□□ 1.93
ATP6V0A1Q93050 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
ATP6V0A1Q93050 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC27.11■■□□□ 1.93
ATP6V0A1Q93050 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
ATP6V0A1Q93050 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC27.1■■□□□ 1.93
ATP6V0A1Q93050 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC27.1■■□□□ 1.93
ATP6V0A1Q93050 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC27.1■■□□□ 1.93
ATP6V0A1Q93050 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
ATP6V0A1Q93050 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
ATP6V0A1Q93050 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
ATP6V0A1Q93050 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
ATP6V0A1Q93050 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC27.09■■□□□ 1.93
ATP6V0A1Q93050 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
ATP6V0A1Q93050 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
ATP6V0A1Q93050 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC27.08■■□□□ 1.93
ATP6V0A1Q93050 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
ATP6V0A1Q93050 IDNK-201ENST00000376417 511 ntTSL 5 BASIC27.08■■□□□ 1.93
ATP6V0A1Q93050 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
ATP6V0A1Q93050 AC009299.2-201ENST00000482477 511 ntBASIC27.08■■□□□ 1.93
ATP6V0A1Q93050 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC27.08■■□□□ 1.93
ATP6V0A1Q93050 MIR4508-201ENST00000584178 70 ntBASIC27.08■■□□□ 1.93
ATP6V0A1Q93050 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC27.08■■□□□ 1.93
ATP6V0A1Q93050 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
ATP6V0A1Q93050 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC27.07■■□□□ 1.92
ATP6V0A1Q93050 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
ATP6V0A1Q93050 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
ATP6V0A1Q93050 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC27.07■■□□□ 1.92
ATP6V0A1Q93050 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC27.07■■□□□ 1.92
ATP6V0A1Q93050 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
ATP6V0A1Q93050 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
ATP6V0A1Q93050 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms