Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
LSMEM1Q8N8F7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LSMEM1Q8N8F7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.15■■□□□ 1.14
LSMEM1Q8N8F7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.15■■□□□ 1.14
LSMEM1Q8N8F7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LSMEM1Q8N8F7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.14■■□□□ 1.14
LSMEM1Q8N8F7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
LSMEM1Q8N8F7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
LSMEM1Q8N8F7 AC020928.2-201ENST00000588717 2197 ntBASIC22.14■■□□□ 1.13
LSMEM1Q8N8F7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
LSMEM1Q8N8F7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
LSMEM1Q8N8F7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.14■■□□□ 1.13
LSMEM1Q8N8F7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
LSMEM1Q8N8F7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
LSMEM1Q8N8F7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LSMEM1Q8N8F7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
LSMEM1Q8N8F7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
LSMEM1Q8N8F7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
LSMEM1Q8N8F7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
LSMEM1Q8N8F7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.12■■□□□ 1.13
LSMEM1Q8N8F7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
LSMEM1Q8N8F7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
LSMEM1Q8N8F7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LSMEM1Q8N8F7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.12■■□□□ 1.13
LSMEM1Q8N8F7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.12■■□□□ 1.13
LSMEM1Q8N8F7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
LSMEM1Q8N8F7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.11■■□□□ 1.13
LSMEM1Q8N8F7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LSMEM1Q8N8F7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LSMEM1Q8N8F7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
LSMEM1Q8N8F7 AC060814.1-201ENST00000554326 538 ntBASIC22.11■■□□□ 1.13
LSMEM1Q8N8F7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.11■■□□□ 1.13
LSMEM1Q8N8F7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.11■■□□□ 1.13
LSMEM1Q8N8F7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
LSMEM1Q8N8F7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
LSMEM1Q8N8F7 AL157400.5-201ENST00000507624 621 ntBASIC22.1■■□□□ 1.13
LSMEM1Q8N8F7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
LSMEM1Q8N8F7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.1■■□□□ 1.13
LSMEM1Q8N8F7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.09■■□□□ 1.13
LSMEM1Q8N8F7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LSMEM1Q8N8F7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
LSMEM1Q8N8F7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
LSMEM1Q8N8F7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.08■■□□□ 1.13
LSMEM1Q8N8F7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
LSMEM1Q8N8F7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
LSMEM1Q8N8F7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
LSMEM1Q8N8F7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
LSMEM1Q8N8F7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
LSMEM1Q8N8F7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
LSMEM1Q8N8F7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
LSMEM1Q8N8F7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
LSMEM1Q8N8F7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
LSMEM1Q8N8F7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LSMEM1Q8N8F7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
LSMEM1Q8N8F7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
LSMEM1Q8N8F7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
LSMEM1Q8N8F7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.07■■□□□ 1.12
LSMEM1Q8N8F7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LSMEM1Q8N8F7 AC025884.2-201ENST00000553429 711 ntBASIC22.07■■□□□ 1.12
LSMEM1Q8N8F7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
LSMEM1Q8N8F7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.07■■□□□ 1.12
LSMEM1Q8N8F7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
LSMEM1Q8N8F7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.06■■□□□ 1.12
LSMEM1Q8N8F7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.06■■□□□ 1.12
LSMEM1Q8N8F7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.06■■□□□ 1.12
LSMEM1Q8N8F7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
LSMEM1Q8N8F7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.06■■□□□ 1.12
LSMEM1Q8N8F7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LSMEM1Q8N8F7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.06■■□□□ 1.12
LSMEM1Q8N8F7 AC096887.2-201ENST00000623443 1957 ntBASIC22.06■■□□□ 1.12
LSMEM1Q8N8F7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LSMEM1Q8N8F7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.05■■□□□ 1.12
LSMEM1Q8N8F7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC22.05■■□□□ 1.12
LSMEM1Q8N8F7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.05■■□□□ 1.12
LSMEM1Q8N8F7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.05■■□□□ 1.12
LSMEM1Q8N8F7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
LSMEM1Q8N8F7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LSMEM1Q8N8F7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22.04■■□□□ 1.12
LSMEM1Q8N8F7 AC092296.2-201ENST00000589470 999 ntBASIC22.04■■□□□ 1.12
LSMEM1Q8N8F7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.04■■□□□ 1.12
LSMEM1Q8N8F7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LSMEM1Q8N8F7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LSMEM1Q8N8F7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LSMEM1Q8N8F7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LSMEM1Q8N8F7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.03■■□□□ 1.12
LSMEM1Q8N8F7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.03■■□□□ 1.12
LSMEM1Q8N8F7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LSMEM1Q8N8F7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LSMEM1Q8N8F7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LSMEM1Q8N8F7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LSMEM1Q8N8F7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.03■■□□□ 1.12
LSMEM1Q8N8F7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
LSMEM1Q8N8F7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LSMEM1Q8N8F7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LSMEM1Q8N8F7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
LSMEM1Q8N8F7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
LSMEM1Q8N8F7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
LSMEM1Q8N8F7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
LSMEM1Q8N8F7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LSMEM1Q8N8F7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms