Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 AL451085.2-201ENST00000605085 799 ntBASIC25.64■■□□□ 1.7
TTC9BQ8N6N2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
TTC9BQ8N6N2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
TTC9BQ8N6N2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
TTC9BQ8N6N2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.63■■□□□ 1.69
TTC9BQ8N6N2 HYI-210ENST00000486909 905 ntTSL 5 BASIC25.63■■□□□ 1.69
TTC9BQ8N6N2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TTC9BQ8N6N2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
TTC9BQ8N6N2 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
TTC9BQ8N6N2 AC074183.2-201ENST00000623112 922 ntBASIC25.62■■□□□ 1.69
TTC9BQ8N6N2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TTC9BQ8N6N2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TTC9BQ8N6N2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
TTC9BQ8N6N2 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TTC9BQ8N6N2 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC25.61■■□□□ 1.69
TTC9BQ8N6N2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
TTC9BQ8N6N2 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.61■■□□□ 1.69
TTC9BQ8N6N2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TTC9BQ8N6N2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TTC9BQ8N6N2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.6■■□□□ 1.69
TTC9BQ8N6N2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.6■■□□□ 1.69
TTC9BQ8N6N2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TTC9BQ8N6N2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
TTC9BQ8N6N2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TTC9BQ8N6N2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
TTC9BQ8N6N2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
TTC9BQ8N6N2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
TTC9BQ8N6N2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
TTC9BQ8N6N2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TTC9BQ8N6N2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.59■■□□□ 1.69
TTC9BQ8N6N2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.59■■□□□ 1.69
TTC9BQ8N6N2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.58■■□□□ 1.69
TTC9BQ8N6N2 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC25.58■■□□□ 1.69
TTC9BQ8N6N2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
TTC9BQ8N6N2 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TTC9BQ8N6N2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TTC9BQ8N6N2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.57■■□□□ 1.68
TTC9BQ8N6N2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC25.57■■□□□ 1.68
TTC9BQ8N6N2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TTC9BQ8N6N2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TTC9BQ8N6N2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
TTC9BQ8N6N2 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TTC9BQ8N6N2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.56■■□□□ 1.68
TTC9BQ8N6N2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TTC9BQ8N6N2 AC087393.1-201ENST00000582896 145 ntBASIC25.56■■□□□ 1.68
TTC9BQ8N6N2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
TTC9BQ8N6N2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.56■■□□□ 1.68
TTC9BQ8N6N2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.56■■□□□ 1.68
TTC9BQ8N6N2 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TTC9BQ8N6N2 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TTC9BQ8N6N2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC25.55■■□□□ 1.68
TTC9BQ8N6N2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TTC9BQ8N6N2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC25.55■■□□□ 1.68
TTC9BQ8N6N2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.54■■□□□ 1.68
TTC9BQ8N6N2 RPS2P7-201ENST00000447334 885 ntBASIC25.54■■□□□ 1.68
TTC9BQ8N6N2 AL035685.1-201ENST00000636663 812 ntBASIC25.54■■□□□ 1.68
TTC9BQ8N6N2 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
TTC9BQ8N6N2 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TTC9BQ8N6N2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TTC9BQ8N6N2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TTC9BQ8N6N2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TTC9BQ8N6N2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
TTC9BQ8N6N2 YBX1P4-201ENST00000392794 808 ntBASIC25.52■■□□□ 1.68
TTC9BQ8N6N2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TTC9BQ8N6N2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TTC9BQ8N6N2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.52■■□□□ 1.68
TTC9BQ8N6N2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TTC9BQ8N6N2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
TTC9BQ8N6N2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.51■■□□□ 1.67
TTC9BQ8N6N2 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC25.51■■□□□ 1.67
TTC9BQ8N6N2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TTC9BQ8N6N2 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TTC9BQ8N6N2 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TTC9BQ8N6N2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.5■■□□□ 1.67
TTC9BQ8N6N2 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TTC9BQ8N6N2 MIR4508-201ENST00000584178 70 ntBASIC25.5■■□□□ 1.67
TTC9BQ8N6N2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TTC9BQ8N6N2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TTC9BQ8N6N2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC25.49■■□□□ 1.67
TTC9BQ8N6N2 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TTC9BQ8N6N2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TTC9BQ8N6N2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.48■■□□□ 1.67
TTC9BQ8N6N2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
TTC9BQ8N6N2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TTC9BQ8N6N2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
TTC9BQ8N6N2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
TTC9BQ8N6N2 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
TTC9BQ8N6N2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
TTC9BQ8N6N2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
TTC9BQ8N6N2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
TTC9BQ8N6N2 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TTC9BQ8N6N2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
TTC9BQ8N6N2 LONRF2P2-201ENST00000439212 571 ntBASIC25.47■■□□□ 1.67
TTC9BQ8N6N2 MTX2-204ENST00000443241 799 ntTSL 3 BASIC25.47■■□□□ 1.67
TTC9BQ8N6N2 AC103724.3-201ENST00000564481 992 ntBASIC25.47■■□□□ 1.67
TTC9BQ8N6N2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC25.47■■□□□ 1.67
TTC9BQ8N6N2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
TTC9BQ8N6N2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
TTC9BQ8N6N2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TTC9BQ8N6N2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.46■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms