Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC30.45■■■□□ 2.46
UBE3BQ7Z3V4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC30.45■■■□□ 2.46
UBE3BQ7Z3V4 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
UBE3BQ7Z3V4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
UBE3BQ7Z3V4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC30.44■■■□□ 2.46
UBE3BQ7Z3V4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
UBE3BQ7Z3V4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
UBE3BQ7Z3V4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
UBE3BQ7Z3V4 HYI-210ENST00000486909 905 ntTSL 5 BASIC30.44■■■□□ 2.46
UBE3BQ7Z3V4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC30.44■■■□□ 2.46
UBE3BQ7Z3V4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC30.44■■■□□ 2.46
UBE3BQ7Z3V4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC30.43■■■□□ 2.46
UBE3BQ7Z3V4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
UBE3BQ7Z3V4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC30.43■■■□□ 2.46
UBE3BQ7Z3V4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
UBE3BQ7Z3V4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC30.43■■■□□ 2.46
UBE3BQ7Z3V4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
UBE3BQ7Z3V4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC30.43■■■□□ 2.46
UBE3BQ7Z3V4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC30.42■■■□□ 2.46
UBE3BQ7Z3V4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC30.42■■■□□ 2.46
UBE3BQ7Z3V4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC30.42■■■□□ 2.46
UBE3BQ7Z3V4 AC074183.2-201ENST00000623112 922 ntBASIC30.42■■■□□ 2.46
UBE3BQ7Z3V4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC30.42■■■□□ 2.46
UBE3BQ7Z3V4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC30.41■■■□□ 2.46
UBE3BQ7Z3V4 KRT8P33-201ENST00000508125 1423 ntBASIC30.41■■■□□ 2.46
UBE3BQ7Z3V4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
UBE3BQ7Z3V4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
UBE3BQ7Z3V4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
UBE3BQ7Z3V4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC30.4■■■□□ 2.46
UBE3BQ7Z3V4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
UBE3BQ7Z3V4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC30.4■■■□□ 2.46
UBE3BQ7Z3V4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC30.4■■■□□ 2.46
UBE3BQ7Z3V4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
UBE3BQ7Z3V4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC30.4■■■□□ 2.46
UBE3BQ7Z3V4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
UBE3BQ7Z3V4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
UBE3BQ7Z3V4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.46
UBE3BQ7Z3V4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
UBE3BQ7Z3V4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
UBE3BQ7Z3V4 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
UBE3BQ7Z3V4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC30.36■■■□□ 2.45
UBE3BQ7Z3V4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
UBE3BQ7Z3V4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
UBE3BQ7Z3V4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
UBE3BQ7Z3V4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
UBE3BQ7Z3V4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC30.35■■■□□ 2.45
UBE3BQ7Z3V4 AC103834.1-201ENST00000520383 144 ntBASIC30.35■■■□□ 2.45
UBE3BQ7Z3V4 AC087393.1-201ENST00000582896 145 ntBASIC30.35■■■□□ 2.45
UBE3BQ7Z3V4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
UBE3BQ7Z3V4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
UBE3BQ7Z3V4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
UBE3BQ7Z3V4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC30.33■■■□□ 2.45
UBE3BQ7Z3V4 RPS2P7-201ENST00000447334 885 ntBASIC30.33■■■□□ 2.45
UBE3BQ7Z3V4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC30.33■■■□□ 2.45
UBE3BQ7Z3V4 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
UBE3BQ7Z3V4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
UBE3BQ7Z3V4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
UBE3BQ7Z3V4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.44
UBE3BQ7Z3V4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
UBE3BQ7Z3V4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
UBE3BQ7Z3V4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
UBE3BQ7Z3V4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
UBE3BQ7Z3V4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC30.31■■■□□ 2.44
UBE3BQ7Z3V4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
UBE3BQ7Z3V4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC30.31■■■□□ 2.44
UBE3BQ7Z3V4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
UBE3BQ7Z3V4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC30.31■■■□□ 2.44
UBE3BQ7Z3V4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC30.3■■■□□ 2.44
UBE3BQ7Z3V4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
UBE3BQ7Z3V4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
UBE3BQ7Z3V4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC30.3■■■□□ 2.44
UBE3BQ7Z3V4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
UBE3BQ7Z3V4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
UBE3BQ7Z3V4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
UBE3BQ7Z3V4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
UBE3BQ7Z3V4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.44
UBE3BQ7Z3V4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
UBE3BQ7Z3V4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
UBE3BQ7Z3V4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
UBE3BQ7Z3V4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
UBE3BQ7Z3V4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
UBE3BQ7Z3V4 AL451085.2-201ENST00000605085 799 ntBASIC30.28■■■□□ 2.44
UBE3BQ7Z3V4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
UBE3BQ7Z3V4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
UBE3BQ7Z3V4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
UBE3BQ7Z3V4 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
UBE3BQ7Z3V4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
UBE3BQ7Z3V4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC30.27■■■□□ 2.44
UBE3BQ7Z3V4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
UBE3BQ7Z3V4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC30.27■■■□□ 2.44
UBE3BQ7Z3V4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
UBE3BQ7Z3V4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
UBE3BQ7Z3V4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
UBE3BQ7Z3V4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
UBE3BQ7Z3V4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
UBE3BQ7Z3V4 YBX1P4-201ENST00000392794 808 ntBASIC30.25■■■□□ 2.43
UBE3BQ7Z3V4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC30.25■■■□□ 2.43
UBE3BQ7Z3V4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC30.25■■■□□ 2.43
UBE3BQ7Z3V4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC30.25■■■□□ 2.43
UBE3BQ7Z3V4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC30.25■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms