Protein–RNA interactions for Protein: Q6X4T0

C12orf54, Uncharacterized protein C12orf54, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf54Q6X4T0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
C12orf54Q6X4T0 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
C12orf54Q6X4T0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C12orf54Q6X4T0 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
C12orf54Q6X4T0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
C12orf54Q6X4T0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.41■□□□□ 0.7
C12orf54Q6X4T0 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
C12orf54Q6X4T0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C12orf54Q6X4T0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C12orf54Q6X4T0 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
C12orf54Q6X4T0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.4■□□□□ 0.7
C12orf54Q6X4T0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.4■□□□□ 0.7
C12orf54Q6X4T0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
C12orf54Q6X4T0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C12orf54Q6X4T0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C12orf54Q6X4T0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C12orf54Q6X4T0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C12orf54Q6X4T0 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
C12orf54Q6X4T0 KRT16P3-201ENST00000439127 1283 ntBASIC19.39■□□□□ 0.69
C12orf54Q6X4T0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
C12orf54Q6X4T0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.39■□□□□ 0.69
C12orf54Q6X4T0 AC019171.1-201ENST00000601251 1056 ntBASIC19.39■□□□□ 0.69
C12orf54Q6X4T0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.39■□□□□ 0.69
C12orf54Q6X4T0 BX664725.1-201ENST00000438252 379 ntBASIC19.38■□□□□ 0.69
C12orf54Q6X4T0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
C12orf54Q6X4T0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.38■□□□□ 0.69
C12orf54Q6X4T0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.38■□□□□ 0.69
C12orf54Q6X4T0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.38■□□□□ 0.69
C12orf54Q6X4T0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
C12orf54Q6X4T0 AL139246.5-201ENST00000606645 996 ntBASIC19.38■□□□□ 0.69
C12orf54Q6X4T0 MIR4787-201ENST00000607364 84 ntBASIC19.38■□□□□ 0.69
C12orf54Q6X4T0 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.38■□□□□ 0.69
C12orf54Q6X4T0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
C12orf54Q6X4T0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.37■□□□□ 0.69
C12orf54Q6X4T0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.37■□□□□ 0.69
C12orf54Q6X4T0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.37■□□□□ 0.69
C12orf54Q6X4T0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
C12orf54Q6X4T0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C12orf54Q6X4T0 LONRF2P2-201ENST00000439212 571 ntBASIC19.36■□□□□ 0.69
C12orf54Q6X4T0 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
C12orf54Q6X4T0 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
C12orf54Q6X4T0 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
C12orf54Q6X4T0 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
C12orf54Q6X4T0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
C12orf54Q6X4T0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.35■□□□□ 0.69
C12orf54Q6X4T0 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.35■□□□□ 0.69
C12orf54Q6X4T0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
C12orf54Q6X4T0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.35■□□□□ 0.69
C12orf54Q6X4T0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
C12orf54Q6X4T0 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C12orf54Q6X4T0 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
C12orf54Q6X4T0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
C12orf54Q6X4T0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
C12orf54Q6X4T0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
C12orf54Q6X4T0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
C12orf54Q6X4T0 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
C12orf54Q6X4T0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
C12orf54Q6X4T0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
C12orf54Q6X4T0 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.33■□□□□ 0.68
C12orf54Q6X4T0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.33■□□□□ 0.68
C12orf54Q6X4T0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.33■□□□□ 0.68
C12orf54Q6X4T0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.33■□□□□ 0.68
C12orf54Q6X4T0 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.33■□□□□ 0.68
C12orf54Q6X4T0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
C12orf54Q6X4T0 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C12orf54Q6X4T0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C12orf54Q6X4T0 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C12orf54Q6X4T0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
C12orf54Q6X4T0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.32■□□□□ 0.68
C12orf54Q6X4T0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C12orf54Q6X4T0 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C12orf54Q6X4T0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
C12orf54Q6X4T0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.32■□□□□ 0.68
C12orf54Q6X4T0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
C12orf54Q6X4T0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
C12orf54Q6X4T0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.31■□□□□ 0.68
C12orf54Q6X4T0 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.31■□□□□ 0.68
C12orf54Q6X4T0 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C12orf54Q6X4T0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.31■□□□□ 0.68
C12orf54Q6X4T0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.3■□□□□ 0.68
C12orf54Q6X4T0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.3■□□□□ 0.68
C12orf54Q6X4T0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.3■□□□□ 0.68
C12orf54Q6X4T0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C12orf54Q6X4T0 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
C12orf54Q6X4T0 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C12orf54Q6X4T0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.3■□□□□ 0.68
C12orf54Q6X4T0 UNC93B8-201ENST00000511903 705 ntBASIC19.29■□□□□ 0.68
C12orf54Q6X4T0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.29■□□□□ 0.68
C12orf54Q6X4T0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
C12orf54Q6X4T0 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
C12orf54Q6X4T0 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.28■□□□□ 0.68
C12orf54Q6X4T0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
C12orf54Q6X4T0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
C12orf54Q6X4T0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
C12orf54Q6X4T0 AC087393.1-201ENST00000582896 145 ntBASIC19.28■□□□□ 0.68
C12orf54Q6X4T0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C12orf54Q6X4T0 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.28■□□□□ 0.68
C12orf54Q6X4T0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
C12orf54Q6X4T0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
C12orf54Q6X4T0 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms