Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.59■□□□□ 0.89
UBA52P62987 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBA52P62987 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBA52P62987 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBA52P62987 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.59■□□□□ 0.89
UBA52P62987 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.58■□□□□ 0.89
UBA52P62987 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBA52P62987 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBA52P62987 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBA52P62987 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBA52P62987 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBA52P62987 AC012676.1-201ENST00000574705 1949 ntBASIC20.58■□□□□ 0.88
UBA52P62987 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.58■□□□□ 0.88
UBA52P62987 AC127502.1-201ENST00000399971 1502 ntBASIC20.58■□□□□ 0.88
UBA52P62987 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBA52P62987 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBA52P62987 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBA52P62987 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBA52P62987 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBA52P62987 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
UBA52P62987 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
UBA52P62987 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.57■□□□□ 0.88
UBA52P62987 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.56■□□□□ 0.88
UBA52P62987 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
UBA52P62987 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBA52P62987 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBA52P62987 AC135983.2-203ENST00000454486 1613 ntBASIC20.56■□□□□ 0.88
UBA52P62987 WHAMMP2-203ENST00000563942 1603 ntBASIC20.56■□□□□ 0.88
UBA52P62987 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
UBA52P62987 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.55■□□□□ 0.88
UBA52P62987 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.55■□□□□ 0.88
UBA52P62987 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UBA52P62987 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
UBA52P62987 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBA52P62987 AC133561.1-201ENST00000568600 2415 ntBASIC20.55■□□□□ 0.88
UBA52P62987 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBA52P62987 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBA52P62987 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBA52P62987 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.54■□□□□ 0.88
UBA52P62987 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBA52P62987 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBA52P62987 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBA52P62987 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBA52P62987 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
UBA52P62987 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
UBA52P62987 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
UBA52P62987 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
UBA52P62987 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.51■□□□□ 0.87
UBA52P62987 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
UBA52P62987 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
UBA52P62987 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.51■□□□□ 0.87
UBA52P62987 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBA52P62987 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBA52P62987 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBA52P62987 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.51■□□□□ 0.87
UBA52P62987 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBA52P62987 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBA52P62987 AC110285.7-201ENST00000624417 1536 ntBASIC20.5■□□□□ 0.87
UBA52P62987 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBA52P62987 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
UBA52P62987 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
UBA52P62987 LINC00543-201ENST00000567234 1845 ntBASIC20.5■□□□□ 0.87
UBA52P62987 AC092803.2-201ENST00000564287 1899 ntBASIC20.5■□□□□ 0.87
UBA52P62987 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
UBA52P62987 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBA52P62987 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.49■□□□□ 0.87
UBA52P62987 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
UBA52P62987 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBA52P62987 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UBA52P62987 AC148477.6-201ENST00000623746 465 ntBASIC20.49■□□□□ 0.87
UBA52P62987 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBA52P62987 ERN1-208ENST00000606895 2068 ntBASIC20.49■□□□□ 0.87
UBA52P62987 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.48■□□□□ 0.87
UBA52P62987 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.48■□□□□ 0.87
UBA52P62987 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBA52P62987 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.48■□□□□ 0.87
UBA52P62987 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
UBA52P62987 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
UBA52P62987 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBA52P62987 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBA52P62987 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UBA52P62987 AC060814.1-201ENST00000554326 538 ntBASIC20.47■□□□□ 0.87
UBA52P62987 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.47■□□□□ 0.87
UBA52P62987 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBA52P62987 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.47■□□□□ 0.87
UBA52P62987 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UBA52P62987 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
UBA52P62987 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
UBA52P62987 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBA52P62987 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBA52P62987 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
UBA52P62987 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
UBA52P62987 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBA52P62987 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
UBA52P62987 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBA52P62987 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBA52P62987 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBA52P62987 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBA52P62987 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBA52P62987 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms