Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CEACAM3P40198 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CEACAM3P40198 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.66■□□□□ 0.74
CEACAM3P40198 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
CEACAM3P40198 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CEACAM3P40198 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CEACAM3P40198 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CEACAM3P40198 AC135731.1-201ENST00000569415 2548 ntBASIC19.65■□□□□ 0.74
CEACAM3P40198 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CEACAM3P40198 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CEACAM3P40198 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CEACAM3P40198 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.65■□□□□ 0.74
CEACAM3P40198 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CEACAM3P40198 AC133552.2-201ENST00000619106 1032 ntBASIC19.65■□□□□ 0.74
CEACAM3P40198 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CEACAM3P40198 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CEACAM3P40198 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CEACAM3P40198 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.64■□□□□ 0.74
CEACAM3P40198 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CEACAM3P40198 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.64■□□□□ 0.73
CEACAM3P40198 AC026202.3-201ENST00000600805 1127 ntBASIC19.64■□□□□ 0.73
CEACAM3P40198 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CEACAM3P40198 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CEACAM3P40198 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CEACAM3P40198 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CEACAM3P40198 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CEACAM3P40198 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CEACAM3P40198 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CEACAM3P40198 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.63■□□□□ 0.73
CEACAM3P40198 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CEACAM3P40198 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.63■□□□□ 0.73
CEACAM3P40198 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.63■□□□□ 0.73
CEACAM3P40198 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
CEACAM3P40198 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CEACAM3P40198 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CEACAM3P40198 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CEACAM3P40198 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CEACAM3P40198 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
CEACAM3P40198 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.62■□□□□ 0.73
CEACAM3P40198 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CEACAM3P40198 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CEACAM3P40198 RAP2CP1-202ENST00000605179 643 ntBASIC19.61■□□□□ 0.73
CEACAM3P40198 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CEACAM3P40198 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CEACAM3P40198 AC009831.1-201ENST00000580420 1582 ntBASIC19.61■□□□□ 0.73
CEACAM3P40198 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CEACAM3P40198 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CEACAM3P40198 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CEACAM3P40198 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CEACAM3P40198 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.59■□□□□ 0.73
CEACAM3P40198 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CEACAM3P40198 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CEACAM3P40198 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CEACAM3P40198 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CEACAM3P40198 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.59■□□□□ 0.73
CEACAM3P40198 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CEACAM3P40198 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.59■□□□□ 0.73
CEACAM3P40198 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.59■□□□□ 0.73
CEACAM3P40198 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CEACAM3P40198 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.59■□□□□ 0.73
CEACAM3P40198 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CEACAM3P40198 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CEACAM3P40198 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CEACAM3P40198 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CEACAM3P40198 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CEACAM3P40198 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CEACAM3P40198 KRT18P10-201ENST00000388836 1287 ntBASIC19.58■□□□□ 0.72
CEACAM3P40198 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CEACAM3P40198 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.58■□□□□ 0.72
CEACAM3P40198 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.58■□□□□ 0.72
CEACAM3P40198 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CEACAM3P40198 AC092803.2-201ENST00000564287 1899 ntBASIC19.58■□□□□ 0.72
CEACAM3P40198 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CEACAM3P40198 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CEACAM3P40198 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CEACAM3P40198 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.57■□□□□ 0.72
CEACAM3P40198 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CEACAM3P40198 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.57■□□□□ 0.72
CEACAM3P40198 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.57■□□□□ 0.72
CEACAM3P40198 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CEACAM3P40198 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CEACAM3P40198 NTF6A-201ENST00000591175 560 ntBASIC19.57■□□□□ 0.72
CEACAM3P40198 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CEACAM3P40198 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CEACAM3P40198 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CEACAM3P40198 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CEACAM3P40198 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CEACAM3P40198 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CEACAM3P40198 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CEACAM3P40198 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CEACAM3P40198 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.56■□□□□ 0.72
CEACAM3P40198 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CEACAM3P40198 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CEACAM3P40198 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CEACAM3P40198 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CEACAM3P40198 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CEACAM3P40198 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CEACAM3P40198 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.55■□□□□ 0.72
CEACAM3P40198 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CEACAM3P40198 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms