Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HLA-DQA2P01906 AC016575.1-201ENST00000607026 382 ntBASIC21.57■■□□□ 1.04
HLA-DQA2P01906 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DQA2P01906 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DQA2P01906 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DQA2P01906 AL359504.2-201ENST00000605506 1601 ntBASIC21.57■■□□□ 1.04
HLA-DQA2P01906 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DQA2P01906 AC010501.1-201ENST00000606270 1962 ntBASIC21.57■■□□□ 1.04
HLA-DQA2P01906 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.57■■□□□ 1.04
HLA-DQA2P01906 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DQA2P01906 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
HLA-DQA2P01906 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HLA-DQA2P01906 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.56■■□□□ 1.04
HLA-DQA2P01906 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
HLA-DQA2P01906 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HLA-DQA2P01906 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
HLA-DQA2P01906 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HLA-DQA2P01906 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
HLA-DQA2P01906 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HLA-DQA2P01906 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HLA-DQA2P01906 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HLA-DQA2P01906 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.55■■□□□ 1.04
HLA-DQA2P01906 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HLA-DQA2P01906 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.55■■□□□ 1.04
HLA-DQA2P01906 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.55■■□□□ 1.04
HLA-DQA2P01906 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HLA-DQA2P01906 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HLA-DQA2P01906 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
HLA-DQA2P01906 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HLA-DQA2P01906 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.53■■□□□ 1.04
HLA-DQA2P01906 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HLA-DQA2P01906 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
HLA-DQA2P01906 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HLA-DQA2P01906 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.52■■□□□ 1.04
HLA-DQA2P01906 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
HLA-DQA2P01906 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HLA-DQA2P01906 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.52■■□□□ 1.04
HLA-DQA2P01906 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.52■■□□□ 1.04
HLA-DQA2P01906 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HLA-DQA2P01906 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.52■■□□□ 1.04
HLA-DQA2P01906 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HLA-DQA2P01906 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.52■■□□□ 1.03
HLA-DQA2P01906 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
HLA-DQA2P01906 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HLA-DQA2P01906 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.51■■□□□ 1.03
HLA-DQA2P01906 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
HLA-DQA2P01906 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HLA-DQA2P01906 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
HLA-DQA2P01906 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HLA-DQA2P01906 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HLA-DQA2P01906 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HLA-DQA2P01906 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
HLA-DQA2P01906 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
HLA-DQA2P01906 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.49■■□□□ 1.03
HLA-DQA2P01906 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HLA-DQA2P01906 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HLA-DQA2P01906 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.48■■□□□ 1.03
HLA-DQA2P01906 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HLA-DQA2P01906 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
HLA-DQA2P01906 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.48■■□□□ 1.03
HLA-DQA2P01906 MIR7108-201ENST00000614319 87 ntBASIC21.48■■□□□ 1.03
HLA-DQA2P01906 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HLA-DQA2P01906 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HLA-DQA2P01906 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DQA2P01906 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DQA2P01906 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DQA2P01906 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DQA2P01906 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.47■■□□□ 1.03
HLA-DQA2P01906 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DQA2P01906 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DQA2P01906 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DQA2P01906 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DQA2P01906 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DQA2P01906 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DQA2P01906 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DQA2P01906 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
HLA-DQA2P01906 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
HLA-DQA2P01906 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DQA2P01906 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DQA2P01906 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DQA2P01906 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
HLA-DQA2P01906 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DQA2P01906 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DQA2P01906 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DQA2P01906 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.44■■□□□ 1.02
HLA-DQA2P01906 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DQA2P01906 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.44■■□□□ 1.02
HLA-DQA2P01906 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DQA2P01906 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DQA2P01906 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DQA2P01906 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.44■■□□□ 1.02
HLA-DQA2P01906 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
HLA-DQA2P01906 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DQA2P01906 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
HLA-DQA2P01906 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DQA2P01906 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.44■■□□□ 1.02
HLA-DQA2P01906 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
HLA-DQA2P01906 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
HLA-DQA2P01906 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
HLA-DQA2P01906 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms